RNA–Protein interactions for RNA: ENST00000458721.5

VPS8-214, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 946 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-214ENST00000458721 GCP02774 474 aa8.21□□□□□ -1.1
VPS8-214ENST00000458721 LARP1Q6PKG0 1096 aaKnown RBP8.21□□□□□ -1.1
VPS8-214ENST00000458721 BBXQ8WY36 941 aaPredicted RBP8.21□□□□□ -1.1
VPS8-214ENST00000458721 USP35Q9P2H5 1018 aa8.21□□□□□ -1.1
VPS8-214ENST00000458721 KDM2AQ9Y2K7 1162 aa8.21□□□□□ -1.1
VPS8-214ENST00000458721 CENPJQ9HC77 1338 aaPredicted RBP8.21□□□□□ -1.1
VPS8-214ENST00000458721 MYOM1P52179 1685 aa8.21□□□□□ -1.1
VPS8-214ENST00000458721 FAM208AQ9UK61 1670 aaKnown RBP8.21□□□□□ -1.1
VPS8-214ENST00000458721 QSER1Q2KHR3 1735 aa8.2□□□□□ -1.1
VPS8-214ENST00000458721 KCNQ2O43526 872 aa8.2□□□□□ -1.1
VPS8-214ENST00000458721 YY1P25490 414 aa8.2□□□□□ -1.1
VPS8-214ENST00000458721 PPP1R1BQ9UD71 204 aaPredicted RBP8.2□□□□□ -1.1
VPS8-214ENST00000458721 CHD4Q14839 1912 aa8.2□□□□□ -1.1
VPS8-214ENST00000458721 PAPPAQ13219 1627 aa8.2□□□□□ -1.1
VPS8-214ENST00000458721 WDR17Q8IZU2 1322 aa8.2□□□□□ -1.1
VPS8-214ENST00000458721 TNS2Q63HR2 1409 aa8.2□□□□□ -1.1
VPS8-214ENST00000458721 NFAT5O94916 1531 aa8.19□□□□□ -1.1
VPS8-214ENST00000458721 SRPK2P78362 688 aaKnown RBP8.19□□□□□ -1.1
VPS8-214ENST00000458721 DDB1Q16531 1140 aa8.19□□□□□ -1.1
VPS8-214ENST00000458721 RGPD5Q99666 1765 aa8.19□□□□□ -1.1
VPS8-214ENST00000458721 CCDC7Q96M83 1385 aa8.19□□□□□ -1.1
VPS8-214ENST00000458721 PBX2P40425 430 aa8.18□□□□□ -1.1
VPS8-214ENST00000458721 NUTM2GQ5VZR2 741 aa8.18□□□□□ -1.1
VPS8-214ENST00000458721 KCNH5Q8NCM2 988 aa8.18□□□□□ -1.1
VPS8-214ENST00000458721 OXER1Q8TDS5 423 aa8.18□□□□□ -1.1
VPS8-214ENST00000458721 LARP6Q9BRS8 491 aaKnown RBP8.18□□□□□ -1.1
VPS8-214ENST00000458721 TTC21AQ8NDW8 1320 aa8.18□□□□□ -1.1
VPS8-214ENST00000458721 SBNO2Q9Y2G9 1366 aa8.18□□□□□ -1.1
VPS8-214ENST00000458721 LTN1O94822 1766 aa8.17□□□□□ -1.1
VPS8-214ENST00000458721 DDX27Q96GQ7 796 aaKnown RBP8.17□□□□□ -1.1
VPS8-214ENST00000458721 MAP3K5Q99683 1374 aa8.17□□□□□ -1.1
VPS8-214ENST00000458721 COL24A1Q17RW2 1714 aa8.17□□□□□ -1.1
VPS8-214ENST00000458721 TOM1L2Q6ZVM7 507 aa8.16□□□□□ -1.1
VPS8-214ENST00000458721 EVC2Q86UK5 1308 aa8.16□□□□□ -1.1
VPS8-214ENST00000458721 BTAF1O14981 1849 aa8.15□□□□□ -1.1
VPS8-214ENST00000458721 LSM11P83369 360 aaKnown RBP eCLIP8.15□□□□□ -1.1
VPS8-214ENST00000458721 MFSD10Q14728 455 aa8.15□□□□□ -1.1
VPS8-214ENST00000458721 CARD10Q9BWT7 1032 aa8.15□□□□□ -1.1
VPS8-214ENST00000458721 PTGER2P43116 358 aa8.14□□□□□ -1.11
VPS8-214ENST00000458721 ANKRD13DQ6ZTN6 518 aa8.14□□□□□ -1.11
VPS8-214ENST00000458721 ARHGEF25Q86VW2 580 aa8.14□□□□□ -1.11
VPS8-214ENST00000458721 ANO8Q9HCE9 1232 aaPredicted RBP8.14□□□□□ -1.11
VPS8-214ENST00000458721 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.14□□□□□ -1.11
VPS8-214ENST00000458721 USP31Q70CQ4 1352 aa8.13□□□□□ -1.11
VPS8-214ENST00000458721 NBPF1Q3BBV0 1214 aa8.13□□□□□ -1.11
VPS8-214ENST00000458721 PPP4R3BQ5MIZ7 849 aa8.13□□□□□ -1.11
VPS8-214ENST00000458721 MTFR1LQ9H019 292 aa8.13□□□□□ -1.11
VPS8-214ENST00000458721 STK32BQ9NY57 414 aa8.13□□□□□ -1.11
VPS8-214ENST00000458721 CABP1Q9NZU7 370 aa8.13□□□□□ -1.11
VPS8-214ENST00000458721 UTRNP46939 3433 aa8.12□□□□□ -1.11
VPS8-214ENST00000458721 TTC21BQ7Z4L5 1316 aa8.12□□□□□ -1.11
VPS8-214ENST00000458721 SLC15A2Q16348 729 aa8.12□□□□□ -1.11
VPS8-214ENST00000458721 MARCH10Q8NA82 808 aaPredicted RBP8.12□□□□□ -1.11
VPS8-214ENST00000458721 SPRYD3Q8NCJ5 442 aa8.12□□□□□ -1.11
VPS8-214ENST00000458721 LY75O60449 1722 aa8.12□□□□□ -1.11
VPS8-214ENST00000458721 ROCK2O75116 1388 aaKnown RBP8.11□□□□□ -1.11
VPS8-214ENST00000458721 KTN1Q86UP2 1357 aaKnown RBP8.11□□□□□ -1.11
VPS8-214ENST00000458721 EXOC5O00471 708 aa8.11□□□□□ -1.11
VPS8-214ENST00000458721 ARHGAP33O14559 1287 aa8.11□□□□□ -1.11
VPS8-214ENST00000458721 TXNRD1Q16881 649 aa8.11□□□□□ -1.11
VPS8-214ENST00000458721 POTEEQ6S8J3 1075 aa8.11□□□□□ -1.11
VPS8-214ENST00000458721 AXIN2Q9Y2T1 843 aa8.11□□□□□ -1.11
VPS8-214ENST00000458721 EDC4Q6P2E9 1401 aaKnown RBP8.11□□□□□ -1.11
VPS8-214ENST00000458721 TUBGCP6Q96RT7 1819 aa8.1□□□□□ -1.11
VPS8-214ENST00000458721 DOT1LQ8TEK3 1739 aa8.1□□□□□ -1.11
VPS8-214ENST00000458721 CSB-PGBD3P0DP91 1061 aa8.1□□□□□ -1.11
VPS8-214ENST00000458721 RNF166Q96A37 237 aaPredicted RBP8.1□□□□□ -1.11
VPS8-214ENST00000458721 CD163L1Q9NR16 1453 aa8.09□□□□□ -1.11
VPS8-214ENST00000458721 ZBTB7CA1YPR0 619 aa8.09□□□□□ -1.11
VPS8-214ENST00000458721 SLC16A10Q8TF71 515 aa8.09□□□□□ -1.11
VPS8-214ENST00000458721 SHANK3Q9BYB0 1731 aa8.09□□□□□ -1.11
VPS8-214ENST00000458721 ZBTB7AO95365 584 aa8.08□□□□□ -1.12
VPS8-214ENST00000458721 IL2RBP14784 551 aa8.08□□□□□ -1.12
VPS8-214ENST00000458721 HMGB2P26583 209 aaKnown RBP8.08□□□□□ -1.12
VPS8-214ENST00000458721 MAP3K9P80192 1104 aa8.08□□□□□ -1.12
VPS8-214ENST00000458721 SLC27A3Q5K4L6 730 aa8.08□□□□□ -1.12
VPS8-214ENST00000458721 ZNF784Q8NCA9 323 aaPredicted RBP8.08□□□□□ -1.12
VPS8-214ENST00000458721 SYT17Q9BSW7 474 aa8.08□□□□□ -1.12
VPS8-214ENST00000458721 FHDC1Q9C0D6 1143 aaPredicted RBP8.08□□□□□ -1.12
VPS8-214ENST00000458721 EVI5O60447 810 aa8.07□□□□□ -1.12
VPS8-214ENST00000458721 ZNF454Q8N9F8 522 aa8.07□□□□□ -1.12
VPS8-214ENST00000458721 PUS7Q96PZ0 661 aaKnown RBP8.07□□□□□ -1.12
VPS8-214ENST00000458721 C5P01031 1676 aa8.06□□□□□ -1.12
VPS8-214ENST00000458721 PTF1AQ7RTS3 328 aa8.06□□□□□ -1.12
VPS8-214ENST00000458721 L3MBTL2Q969R5 705 aa8.06□□□□□ -1.12
VPS8-214ENST00000458721 ARXQ96QS3 562 aa8.06□□□□□ -1.12
VPS8-214ENST00000458721 PDGFDQ9GZP0 370 aaPredicted RBP8.06□□□□□ -1.12
VPS8-214ENST00000458721 EMILIN3Q9NT22 766 aa8.06□□□□□ -1.12
VPS8-214ENST00000458721 RTL1A6NKG5 1358 aa8.06□□□□□ -1.12
VPS8-214ENST00000458721 SLC24A1O60721 1099 aa8.05□□□□□ -1.12
VPS8-214ENST00000458721 PAXIP1Q6ZW49 1069 aaPredicted RBP8.05□□□□□ -1.12
VPS8-214ENST00000458721 HDGFL2Q7Z4V5 671 aaPredicted RBP8.05□□□□□ -1.12
VPS8-214ENST00000458721 ANKRD36BQ8N2N9 1353 aa8.05□□□□□ -1.12
VPS8-214ENST00000458721 KAT6BQ8WYB5 2073 aa8.04□□□□□ -1.12
VPS8-214ENST00000458721 POLD1P28340 1107 aa8.04□□□□□ -1.12
VPS8-214ENST00000458721 PSEN2P49810 448 aa8.04□□□□□ -1.12
VPS8-214ENST00000458721 FOSBP53539 338 aa8.04□□□□□ -1.12
VPS8-214ENST00000458721 ADGRD1Q6QNK2 874 aa8.04□□□□□ -1.12
VPS8-214ENST00000458721 CFAP44Q96MT7 982 aa8.04□□□□□ -1.12
VPS8-214ENST00000458721 KCNK17Q96T54 332 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 129.7 ms