RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 RAB11FIP3O75154 756 aa4.04□□□□□ -1.76
HMGN1P18-201ENST00000457642 PRPF40AO75400 957 aaKnown RBP4.04□□□□□ -1.76
HMGN1P18-201ENST00000457642 LETM1O95202 739 aaPredicted RBP4.04□□□□□ -1.76
HMGN1P18-201ENST00000457642 CD2BP2O95400 341 aaKnown RBP4.04□□□□□ -1.76
HMGN1P18-201ENST00000457642 CYP2E1P05181 493 aaPredicted RBP4.04□□□□□ -1.76
HMGN1P18-201ENST00000457642 UBTFL1P0CB47 393 aaPredicted RBP4.04□□□□□ -1.76
HMGN1P18-201ENST00000457642 AMPHP49418 695 aa4.04□□□□□ -1.76
HMGN1P18-201ENST00000457642 NEK4P51957 841 aa4.04□□□□□ -1.76
HMGN1P18-201ENST00000457642 PDE1AP54750 535 aa4.04□□□□□ -1.76
HMGN1P18-201ENST00000457642 FKBP5Q13451 457 aaPredicted RBP4.04□□□□□ -1.76
HMGN1P18-201ENST00000457642 MLECQ14165 292 aa4.04□□□□□ -1.76
HMGN1P18-201ENST00000457642 DCTN1Q14203 1278 aa4.04□□□□□ -1.76
HMGN1P18-201ENST00000457642 LRSAM1Q6UWE0 723 aa4.04□□□□□ -1.76
HMGN1P18-201ENST00000457642 KIAA1211Q6ZU35 1233 aa4.04□□□□□ -1.76
HMGN1P18-201ENST00000457642 MCM10Q7L590 875 aa4.04□□□□□ -1.76
HMGN1P18-201ENST00000457642 MTERF4Q7Z6M4 381 aaKnown RBP4.04□□□□□ -1.76
HMGN1P18-201ENST00000457642 FAM184AQ8NB25 1140 aa4.04□□□□□ -1.76
HMGN1P18-201ENST00000457642 RUFY2Q8WXA3 655 aa4.04□□□□□ -1.76
HMGN1P18-201ENST00000457642 RILPL2Q969X0 211 aa4.04□□□□□ -1.76
HMGN1P18-201ENST00000457642 GPATCH3Q96I76 525 aa4.04□□□□□ -1.76
HMGN1P18-201ENST00000457642 MEIS3Q99687 375 aa4.04□□□□□ -1.76
HMGN1P18-201ENST00000457642 ESYT1Q9BSJ8 1104 aa4.04□□□□□ -1.76
HMGN1P18-201ENST00000457642 TSPY26PQ9H489 355 aa4.04□□□□□ -1.76
HMGN1P18-201ENST00000457642 ANO2Q9NQ90 1003 aa4.04□□□□□ -1.76
HMGN1P18-201ENST00000457642 LMBRD1Q9NUN5 540 aa4.04□□□□□ -1.76
HMGN1P18-201ENST00000457642 ZRANB1Q9UGI0 708 aa4.04□□□□□ -1.76
HMGN1P18-201ENST00000457642 DIP2AQ14689 1571 aa4.04□□□□□ -1.76
HMGN1P18-201ENST00000457642 N4BP2Q86UW6 1770 aaPredicted RBP4.04□□□□□ -1.76
HMGN1P18-201ENST00000457642 RGPD1P0DJD0 1748 aa4.04□□□□□ -1.76
HMGN1P18-201ENST00000457642 CRB1P82279 1406 aa4.04□□□□□ -1.76
HMGN1P18-201ENST00000457642 RIMS1Q86UR5 1692 aaKnown RBP4.03□□□□□ -1.76
HMGN1P18-201ENST00000457642 FAM208AQ9UK61 1670 aaKnown RBP4.03□□□□□ -1.76
HMGN1P18-201ENST00000457642 GNAT3A8MTJ3 354 aa4.03□□□□□ -1.76
HMGN1P18-201ENST00000457642 OFD1O75665 1012 aa4.03□□□□□ -1.76
HMGN1P18-201ENST00000457642 PDIA4P13667 645 aaKnown RBP4.03□□□□□ -1.76
HMGN1P18-201ENST00000457642 FBLN1P23142 703 aa4.03□□□□□ -1.76
HMGN1P18-201ENST00000457642 ATP8B2P98198 1209 aa4.03□□□□□ -1.76
HMGN1P18-201ENST00000457642 KIAA2012Q0VF49 1180 aa4.03□□□□□ -1.76
HMGN1P18-201ENST00000457642 FLIIQ13045 1269 aa4.03□□□□□ -1.76
HMGN1P18-201ENST00000457642 GAS2L3Q86XJ1 694 aa4.03□□□□□ -1.76
HMGN1P18-201ENST00000457642 AEBP1Q8IUX7 1158 aa4.03□□□□□ -1.76
HMGN1P18-201ENST00000457642 CNTROBQ8N137 903 aa4.03□□□□□ -1.76
HMGN1P18-201ENST00000457642 NGDNQ8NEJ9 315 aaKnown RBP4.03□□□□□ -1.76
HMGN1P18-201ENST00000457642 TMX3Q96JJ7 454 aa4.03□□□□□ -1.76
HMGN1P18-201ENST00000457642 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.03□□□□□ -1.76
HMGN1P18-201ENST00000457642 UBR1Q8IWV7 1749 aa4.03□□□□□ -1.76
HMGN1P18-201ENST00000457642 ANKARQ7Z5J8 1434 aa4.03□□□□□ -1.76
HMGN1P18-201ENST00000457642 PTPRUQ92729 1446 aa4.03□□□□□ -1.76
HMGN1P18-201ENST00000457642 LRRC37A3O60309 1634 aa4.03□□□□□ -1.77
HMGN1P18-201ENST00000457642 KDRP35968 1356 aa4.02□□□□□ -1.77
HMGN1P18-201ENST00000457642 MAP3K5Q99683 1374 aa4.02□□□□□ -1.77
HMGN1P18-201ENST00000457642 ROBO2Q9HCK4 1378 aa4.02□□□□□ -1.77
HMGN1P18-201ENST00000457642 IGSF1Q8N6C5 1336 aa4.02□□□□□ -1.77
HMGN1P18-201ENST00000457642 PRR36Q9H6K5 1346 aa4.02□□□□□ -1.77
HMGN1P18-201ENST00000457642 PEAK1Q9H792 1746 aa4.02□□□□□ -1.77
HMGN1P18-201ENST00000457642 AK9Q5TCS8 1911 aa4.02□□□□□ -1.77
HMGN1P18-201ENST00000457642 HIP1O00291 1037 aa4.02□□□□□ -1.77
HMGN1P18-201ENST00000457642 ZNF500O60304 480 aaPredicted RBP4.02□□□□□ -1.77
HMGN1P18-201ENST00000457642 BRD1O95696 1058 aa4.02□□□□□ -1.77
HMGN1P18-201ENST00000457642 TPM3P06753 285 aa4.02□□□□□ -1.77
HMGN1P18-201ENST00000457642 HOXB7P09629 217 aa4.02□□□□□ -1.77
HMGN1P18-201ENST00000457642 CHMLP26374 656 aa4.02□□□□□ -1.77
HMGN1P18-201ENST00000457642 OS9Q13438 667 aaPredicted RBP4.02□□□□□ -1.77
HMGN1P18-201ENST00000457642 CUL4AQ13619 759 aa4.02□□□□□ -1.77
HMGN1P18-201ENST00000457642 UVSSAQ2YD98 709 aa4.02□□□□□ -1.77
HMGN1P18-201ENST00000457642 HSP90AB2PQ58FF8 381 aa4.02□□□□□ -1.77
HMGN1P18-201ENST00000457642 CCDC183Q5T5S1 534 aa4.02□□□□□ -1.77
HMGN1P18-201ENST00000457642 ERC1Q8IUD2 1116 aa4.02□□□□□ -1.77
HMGN1P18-201ENST00000457642 C16orf71Q8IYS4 520 aaPredicted RBP4.02□□□□□ -1.77
HMGN1P18-201ENST00000457642 OTUD7AQ8TE49 926 aaPredicted RBP4.02□□□□□ -1.77
HMGN1P18-201ENST00000457642 KIF1BPQ96EK5 621 aa4.02□□□□□ -1.77
HMGN1P18-201ENST00000457642 ZSCAN31Q96LW9 406 aaPredicted RBP4.02□□□□□ -1.77
HMGN1P18-201ENST00000457642 DIAPH3Q9NSV4 1193 aa4.02□□□□□ -1.77
HMGN1P18-201ENST00000457642 STAP2Q9UGK3 403 aa4.02□□□□□ -1.77
HMGN1P18-201ENST00000457642 NOL7Q9UMY1 257 aaKnown RBP4.02□□□□□ -1.77
HMGN1P18-201ENST00000457642 EXOC6BQ9Y2D4 811 aa4.02□□□□□ -1.77
HMGN1P18-201ENST00000457642 ZKSCAN5Q9Y2L8 839 aa4.02□□□□□ -1.77
HMGN1P18-201ENST00000457642 XRN1Q8IZH2 1706 aaKnown RBP4.01□□□□□ -1.77
HMGN1P18-201ENST00000457642 ERBB4Q15303 1308 aa4.01□□□□□ -1.77
HMGN1P18-201ENST00000457642 MAP3K19Q56UN5 1328 aa4.01□□□□□ -1.77
HMGN1P18-201ENST00000457642 SYCE3A1L190 88 aa4.01□□□□□ -1.77
HMGN1P18-201ENST00000457642 GOLGA6L6A8MZA4 724 aa4.01□□□□□ -1.77
HMGN1P18-201ENST00000457642 F6X3S4 739 aa4.01□□□□□ -1.77
HMGN1P18-201ENST00000457642 SOX12O15370 315 aa4.01□□□□□ -1.77
HMGN1P18-201ENST00000457642 TAF7Q15545 349 aaPredicted RBP4.01□□□□□ -1.77
HMGN1P18-201ENST00000457642 MTHFSDQ2M296 383 aaKnown RBP4.01□□□□□ -1.77
HMGN1P18-201ENST00000457642 KRT24Q2M2I5 525 aa4.01□□□□□ -1.77
HMGN1P18-201ENST00000457642 HDGFL1Q5TGJ6 251 aa4.01□□□□□ -1.77
HMGN1P18-201ENST00000457642 CYB5RLQ6IPT4 315 aa4.01□□□□□ -1.77
HMGN1P18-201ENST00000457642 SASS6Q6UVJ0 657 aa4.01□□□□□ -1.77
HMGN1P18-201ENST00000457642 ZGPATQ8N5A5 531 aaKnown RBP4.01□□□□□ -1.77
HMGN1P18-201ENST00000457642 IL17RAQ96F46 866 aa4.01□□□□□ -1.77
HMGN1P18-201ENST00000457642 PDLIM2Q96JY6 352 aa4.01□□□□□ -1.77
HMGN1P18-201ENST00000457642 RBSNQ9H1K0 784 aa4.01□□□□□ -1.77
HMGN1P18-201ENST00000457642 PDCL3Q9H2J4 239 aa4.01□□□□□ -1.77
HMGN1P18-201ENST00000457642 SH2B1Q9NRF2 756 aaPredicted RBP4.01□□□□□ -1.77
HMGN1P18-201ENST00000457642 SMC3Q9UQE7 1217 aa4.01□□□□□ -1.77
HMGN1P18-201ENST00000457642 LRRFIP2Q9Y608 721 aaKnown RBP4.01□□□□□ -1.77
HMGN1P18-201ENST00000457642 ADAMTS13Q76LX8 1427 aa4.01□□□□□ -1.77
HMGN1P18-201ENST00000457642 ADGRL3Q9HAR2 1447 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms