RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 STK31Q9BXU1 1019 aa16.67■□□□□ 0.26
TOP3B-213ENST00000457179 ZNF530Q6P9A1 599 aaPredicted RBP16.66■□□□□ 0.26
TOP3B-213ENST00000457179 NUCB1Q02818 461 aa16.66■□□□□ 0.26
TOP3B-213ENST00000457179 C19orf44Q9H6X5 657 aa16.66■□□□□ 0.26
TOP3B-213ENST00000457179 KCNQ3O43525 872 aa16.65■□□□□ 0.26
TOP3B-213ENST00000457179 TEFQ10587 303 aa16.65■□□□□ 0.26
TOP3B-213ENST00000457179 MEIS3Q99687 375 aa16.65■□□□□ 0.26
TOP3B-213ENST00000457179 SIRT2Q8IXJ6 389 aa16.65■□□□□ 0.26
TOP3B-213ENST00000457179 SSFA2P28290 1259 aa16.64■□□□□ 0.25
TOP3B-213ENST00000457179 USP31Q70CQ4 1352 aa16.64■□□□□ 0.25
TOP3B-213ENST00000457179 ANKRD24Q8TF21 1146 aa16.64■□□□□ 0.25
TOP3B-213ENST00000457179 API5Q9BZZ5 524 aaKnown RBP16.64■□□□□ 0.25
TOP3B-213ENST00000457179 IGSF1Q8N6C5 1336 aa16.64■□□□□ 0.25
TOP3B-213ENST00000457179 RAB3GAP1Q15042 981 aa16.64■□□□□ 0.25
TOP3B-213ENST00000457179 GOLGA6L22H0YM25 854 aa16.63■□□□□ 0.25
TOP3B-213ENST00000457179 IP6K1Q92551 441 aa16.63■□□□□ 0.25
TOP3B-213ENST00000457179 SSH2Q76I76 1423 aa16.63■□□□□ 0.25
TOP3B-213ENST00000457179 SMARCA5O60264 1052 aaPredicted RBP16.63■□□□□ 0.25
TOP3B-213ENST00000457179 TMEM94Q12767 1356 aa16.62■□□□□ 0.25
TOP3B-213ENST00000457179 ITSN1Q15811 1721 aa16.62■□□□□ 0.25
TOP3B-213ENST00000457179 PDE4CQ08493 712 aa16.62■□□□□ 0.25
TOP3B-213ENST00000457179 C16orf71Q8IYS4 520 aaPredicted RBP16.62■□□□□ 0.25
TOP3B-213ENST00000457179 TERF1P54274 439 aa16.61■□□□□ 0.25
TOP3B-213ENST00000457179 HDGFL1Q5TGJ6 251 aa16.61■□□□□ 0.25
TOP3B-213ENST00000457179 CAVIN1Q6NZI2 390 aaKnown RBP16.61■□□□□ 0.25
TOP3B-213ENST00000457179 DDIT3P35638 169 aa16.61■□□□□ 0.25
TOP3B-213ENST00000457179 KCNH5Q8NCM2 988 aa16.61■□□□□ 0.25
TOP3B-213ENST00000457179 PHAXQ9H814 394 aaKnown RBP16.61■□□□□ 0.25
TOP3B-213ENST00000457179 C1orf141Q5JVX7 400 aa16.61■□□□□ 0.25
TOP3B-213ENST00000457179 JARID2Q92833 1246 aaPredicted RBP16.61■□□□□ 0.25
TOP3B-213ENST00000457179 BBXQ8WY36 941 aaPredicted RBP16.6■□□□□ 0.25
TOP3B-213ENST00000457179 PIP4K2AP48426 406 aaPredicted RBP16.6■□□□□ 0.25
TOP3B-213ENST00000457179 TAF7Q15545 349 aaPredicted RBP16.6■□□□□ 0.25
TOP3B-213ENST00000457179 RBM42Q9BTD8 480 aaKnown RBP16.6■□□□□ 0.25
TOP3B-213ENST00000457179 ANKRD26Q9UPS8 1709 aa16.6■□□□□ 0.25
TOP3B-213ENST00000457179 CD2BP2O95400 341 aaKnown RBP16.59■□□□□ 0.25
TOP3B-213ENST00000457179 TSC1Q92574 1164 aa16.59■□□□□ 0.25
TOP3B-213ENST00000457179 DYNC1I1O14576 645 aa16.59■□□□□ 0.25
TOP3B-213ENST00000457179 AIMP1Q12904 312 aaKnown RBP16.59■□□□□ 0.25
TOP3B-213ENST00000457179 SLC39A6Q13433 755 aa16.59■□□□□ 0.25
TOP3B-213ENST00000457179 NOL7Q9UMY1 257 aaKnown RBP16.59■□□□□ 0.25
TOP3B-213ENST00000457179 PRAMEF22A3QJZ6 481 aa16.58■□□□□ 0.24
TOP3B-213ENST00000457179 TSHZ3Q63HK5 1081 aa16.58■□□□□ 0.24
TOP3B-213ENST00000457179 OTUD7AQ8TE49 926 aaPredicted RBP16.58■□□□□ 0.24
TOP3B-213ENST00000457179 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.58■□□□□ 0.24
TOP3B-213ENST00000457179 PIK3R4Q99570 1358 aa16.58■□□□□ 0.24
TOP3B-213ENST00000457179 BTBD11A6QL63 1104 aa16.58■□□□□ 0.24
TOP3B-213ENST00000457179 DNTTIP2Q5QJE6 756 aaKnown RBP16.58■□□□□ 0.24
TOP3B-213ENST00000457179 MCTP1Q6DN14 999 aa16.58■□□□□ 0.24
TOP3B-213ENST00000457179 CBX1P83916 185 aa16.57■□□□□ 0.24
TOP3B-213ENST00000457179 FLIIQ13045 1269 aa16.57■□□□□ 0.24
TOP3B-213ENST00000457179 MTERF4Q7Z6M4 381 aaKnown RBP16.57■□□□□ 0.24
TOP3B-213ENST00000457179 CIZ1Q9ULV3 898 aaPredicted RBP16.57■□□□□ 0.24
TOP3B-213ENST00000457179 MON2Q7Z3U7 1717 aa16.57■□□□□ 0.24
TOP3B-213ENST00000457179 A0A0G2JS52 829 aa16.57■□□□□ 0.24
TOP3B-213ENST00000457179 DMTNQ08495 405 aa16.57■□□□□ 0.24
TOP3B-213ENST00000457179 RBSNQ9H1K0 784 aa16.57■□□□□ 0.24
TOP3B-213ENST00000457179 EXOC6BQ9Y2D4 811 aa16.57■□□□□ 0.24
TOP3B-213ENST00000457179 ARHGEF10O15013 1369 aa16.57■□□□□ 0.24
TOP3B-213ENST00000457179 ABCC4O15439 1325 aa16.57■□□□□ 0.24
TOP3B-213ENST00000457179 PTMSP20962 102 aa16.56■□□□□ 0.24
TOP3B-213ENST00000457179 TBC1D9Q6ZT07 1266 aa16.56■□□□□ 0.24
TOP3B-213ENST00000457179 ARHGEF25Q86VW2 580 aa16.56■□□□□ 0.24
TOP3B-213ENST00000457179 ADGRL3Q9HAR2 1447 aa16.56■□□□□ 0.24
TOP3B-213ENST00000457179 RAPGEF4Q8WZA2 1011 aa16.56■□□□□ 0.24
TOP3B-213ENST00000457179 GCC1Q96CN9 775 aa16.56■□□□□ 0.24
TOP3B-213ENST00000457179 STRN4Q9NRL3 753 aa16.56■□□□□ 0.24
TOP3B-213ENST00000457179 KNDC1Q76NI1 1749 aa16.56■□□□□ 0.24
TOP3B-213ENST00000457179 PEAK1Q9H792 1746 aa16.56■□□□□ 0.24
TOP3B-213ENST00000457179 NCOA3Q9Y6Q9 1424 aa16.56■□□□□ 0.24
TOP3B-213ENST00000457179 ZNF500O60304 480 aaPredicted RBP16.56■□□□□ 0.24
TOP3B-213ENST00000457179 KLHL40Q2TBA0 621 aa16.56■□□□□ 0.24
TOP3B-213ENST00000457179 CCDC94Q9BW85 323 aaPredicted RBP16.56■□□□□ 0.24
TOP3B-213ENST00000457179 MPNDQ8N594 471 aa16.55■□□□□ 0.24
TOP3B-213ENST00000457179 ARHGAP45Q92619 1136 aa16.55■□□□□ 0.24
TOP3B-213ENST00000457179 MSH6P52701 1360 aa16.55■□□□□ 0.24
TOP3B-213ENST00000457179 CCDC30Q5VVM6 783 aa16.55■□□□□ 0.24
TOP3B-213ENST00000457179 ZNF335Q9H4Z2 1342 aaPredicted RBP16.55■□□□□ 0.24
TOP3B-213ENST00000457179 BAG4O95429 457 aaKnown RBP16.54■□□□□ 0.24
TOP3B-213ENST00000457179 ZSCAN20P17040 1043 aaPredicted RBP16.54■□□□□ 0.24
TOP3B-213ENST00000457179 PLEKHO1Q53GL0 409 aaPredicted RBP16.54■□□□□ 0.24
TOP3B-213ENST00000457179 SASS6Q6UVJ0 657 aa16.54■□□□□ 0.24
TOP3B-213ENST00000457179 CHPF2Q9P2E5 772 aa16.54■□□□□ 0.24
TOP3B-213ENST00000457179 ZKSCAN5Q9Y2L8 839 aa16.54■□□□□ 0.24
TOP3B-213ENST00000457179 MAP3K5Q99683 1374 aa16.54■□□□□ 0.24
TOP3B-213ENST00000457179 FAM177BA6PVY3 158 aa16.54■□□□□ 0.24
TOP3B-213ENST00000457179 ZSCAN23Q3MJ62 389 aa16.54■□□□□ 0.24
TOP3B-213ENST00000457179 BMP2KLQ5H9B9 411 aa16.54■□□□□ 0.24
TOP3B-213ENST00000457179 ANKARQ7Z5J8 1434 aa16.54■□□□□ 0.24
TOP3B-213ENST00000457179 PRIM1P49642 420 aaKnown RBP16.54■□□□□ 0.24
TOP3B-213ENST00000457179 SNX21Q969T3 373 aa16.54■□□□□ 0.24
TOP3B-213ENST00000457179 CSPP1Q1MSJ5 1256 aa16.53■□□□□ 0.24
TOP3B-213ENST00000457179 RBM27Q9P2N5 1060 aaKnown RBP16.53■□□□□ 0.24
TOP3B-213ENST00000457179 PTMAP06454 111 aaKnown RBP16.53■□□□□ 0.24
TOP3B-213ENST00000457179 BRPF1P55201 1214 aaPredicted RBP16.53■□□□□ 0.24
TOP3B-213ENST00000457179 RNF214Q8ND24 703 aa16.53■□□□□ 0.24
TOP3B-213ENST00000457179 CHMP4BQ9H444 224 aaKnown RBP16.53■□□□□ 0.24
TOP3B-213ENST00000457179 GSPT1P15170 499 aaKnown RBP16.52■□□□□ 0.24
TOP3B-213ENST00000457179 AKAP12Q02952 1782 aa16.52■□□□□ 0.24
TOP3B-213ENST00000457179 CRB1P82279 1406 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms