RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 MRPL50Q8N5N7 158 aaKnown RBP22.25■■□□□ 1.15
PTPA-223ENST00000452489 ERO1AQ96HE7 468 aa22.25■■□□□ 1.15
PTPA-223ENST00000452489 POLKQ9UBT6 870 aa22.25■■□□□ 1.15
PTPA-223ENST00000452489 SPHKAPQ2M3C7 1700 aa22.25■■□□□ 1.15
PTPA-223ENST00000452489 PSEN1P49768 467 aa22.25■■□□□ 1.15
PTPA-223ENST00000452489 MMP14P50281 582 aa22.25■■□□□ 1.15
PTPA-223ENST00000452489 BMS1Q14692 1282 aaKnown RBP22.25■■□□□ 1.15
PTPA-223ENST00000452489 CCDC192P0DO97 292 aa22.24■■□□□ 1.15
PTPA-223ENST00000452489 GTF2A1P52655 376 aaPredicted RBP22.24■■□□□ 1.15
PTPA-223ENST00000452489 KRBA2Q6ZNG9 492 aa22.24■■□□□ 1.15
PTPA-223ENST00000452489 FAM200AQ8TCP9 573 aa22.24■■□□□ 1.15
PTPA-223ENST00000452489 TARBP1Q13395 1621 aaKnown RBP22.23■■□□□ 1.15
PTPA-223ENST00000452489 RTL1A6NKG5 1358 aa22.23■■□□□ 1.15
PTPA-223ENST00000452489 MAGI1Q96QZ7 1491 aaPredicted RBP22.23■■□□□ 1.15
PTPA-223ENST00000452489 POLR3GO15318 223 aaPredicted RBP22.23■■□□□ 1.15
PTPA-223ENST00000452489 PLA2G4AP47712 749 aa22.23■■□□□ 1.15
PTPA-223ENST00000452489 HDAC5Q9UQL6 1122 aa22.23■■□□□ 1.15
PTPA-223ENST00000452489 KNDC1Q76NI1 1749 aa22.23■■□□□ 1.15
PTPA-223ENST00000452489 ABCC4O15439 1325 aa22.22■■□□□ 1.15
PTPA-223ENST00000452489 CCDC144BQ3MJ40 725 aa22.22■■□□□ 1.15
PTPA-223ENST00000452489 CCDC144CPQ8IYA2 1237 aa22.22■■□□□ 1.15
PTPA-223ENST00000452489 PTPRCP08575 1304 aa22.22■■□□□ 1.15
PTPA-223ENST00000452489 PTCH1Q13635 1447 aa22.22■■□□□ 1.15
PTPA-223ENST00000452489 MYO1CO00159 1063 aa22.22■■□□□ 1.15
PTPA-223ENST00000452489 TRIM5Q9C035 493 aa22.22■■□□□ 1.15
PTPA-223ENST00000452489 ELL2O00472 640 aaPredicted RBP22.21■■□□□ 1.15
PTPA-223ENST00000452489 BRPF1P55201 1214 aaPredicted RBP22.21■■□□□ 1.15
PTPA-223ENST00000452489 SIRT1Q96EB6 747 aa22.21■■□□□ 1.15
PTPA-223ENST00000452489 ZSCAN22P10073 491 aaPredicted RBP22.21■■□□□ 1.15
PTPA-223ENST00000452489 TSPYL6Q8N831 410 aa22.21■■□□□ 1.15
PTPA-223ENST00000452489 MRVI1Q9Y6F6 885 aa22.21■■□□□ 1.15
PTPA-223ENST00000452489 SAMD9LQ8IVG5 1584 aa22.2■■□□□ 1.15
PTPA-223ENST00000452489 H2AFXP16104 143 aaPredicted RBP22.2■■□□□ 1.14
PTPA-223ENST00000452489 ZNF75DP51815 510 aa22.2■■□□□ 1.14
PTPA-223ENST00000452489 ST5P78524 1137 aa22.2■■□□□ 1.14
PTPA-223ENST00000452489 MUM1L1Q5H9M0 696 aa22.2■■□□□ 1.14
PTPA-223ENST00000452489 PNMA6AP0CW24 399 aaPredicted RBP22.2■■□□□ 1.14
PTPA-223ENST00000452489 PTPN14Q15678 1187 aa22.2■■□□□ 1.14
PTPA-223ENST00000452489 ERCC6LQ2NKX8 1250 aa22.2■■□□□ 1.14
PTPA-223ENST00000452489 EXOC6BQ9Y2D4 811 aa22.2■■□□□ 1.14
PTPA-223ENST00000452489 CLCN6P51797 869 aa22.19■■□□□ 1.14
PTPA-223ENST00000452489 ARID5BQ14865 1188 aa22.19■■□□□ 1.14
PTPA-223ENST00000452489 RGS12O14924 1447 aa22.19■■□□□ 1.14
PTPA-223ENST00000452489 DTNBO60941 627 aa22.19■■□□□ 1.14
PTPA-223ENST00000452489 SLU7O95391 586 aaKnown RBP22.19■■□□□ 1.14
PTPA-223ENST00000452489 CAMK4Q16566 473 aa22.19■■□□□ 1.14
PTPA-223ENST00000452489 NYAP1Q6ZVC0 841 aa22.19■■□□□ 1.14
PTPA-223ENST00000452489 PLA2G4DQ86XP0 818 aa22.19■■□□□ 1.14
PTPA-223ENST00000452489 LRRN4CLQ8ND94 238 aa22.19■■□□□ 1.14
PTPA-223ENST00000452489 ARHGAP45Q92619 1136 aa22.19■■□□□ 1.14
PTPA-223ENST00000452489 VAMP4O75379 141 aa22.18■■□□□ 1.14
PTPA-223ENST00000452489 MYCNP04198 464 aaPredicted RBP22.18■■□□□ 1.14
PTPA-223ENST00000452489 PRR29P0C7W0 189 aa22.18■■□□□ 1.14
PTPA-223ENST00000452489 CHMP3Q9Y3E7 222 aa22.18■■□□□ 1.14
PTPA-223ENST00000452489 MAST1Q9Y2H9 1570 aa22.18■■□□□ 1.14
PTPA-223ENST00000452489 TRAPPC8Q9Y2L5 1435 aa22.18■■□□□ 1.14
PTPA-223ENST00000452489 CASQ1P31415 396 aa22.18■■□□□ 1.14
PTPA-223ENST00000452489 SMARCE1Q969G3 411 aa22.18■■□□□ 1.14
PTPA-223ENST00000452489 CBX8Q9HC52 389 aa22.18■■□□□ 1.14
PTPA-223ENST00000452489 LRRFIP2Q9Y608 721 aaKnown RBP22.18■■□□□ 1.14
PTPA-223ENST00000452489 TYRO3Q06418 890 aa22.17■■□□□ 1.14
PTPA-223ENST00000452489 ICE2Q659A1 982 aa22.17■■□□□ 1.14
PTPA-223ENST00000452489 TXLNBQ8N3L3 684 aa22.17■■□□□ 1.14
PTPA-223ENST00000452489 CCDC191Q8NCU4 936 aa22.17■■□□□ 1.14
PTPA-223ENST00000452489 TRMT1Q9NXH9 659 aaKnown RBP22.17■■□□□ 1.14
PTPA-223ENST00000452489 CLIP2Q9UDT6 1046 aa22.17■■□□□ 1.14
PTPA-223ENST00000452489 BRD2P25440 801 aaKnown RBP22.17■■□□□ 1.14
PTPA-223ENST00000452489 DNM1Q05193 864 aaKnown RBP22.16■■□□□ 1.14
PTPA-223ENST00000452489 F13A1P00488 732 aa22.16■■□□□ 1.14
PTPA-223ENST00000452489 SYT1P21579 422 aa22.16■■□□□ 1.14
PTPA-223ENST00000452489 CCDC171Q6TFL3 1326 aa22.16■■□□□ 1.14
PTPA-223ENST00000452489 MYOM2P54296 1465 aa22.16■■□□□ 1.14
PTPA-223ENST00000452489 STX6O43752 255 aa22.15■■□□□ 1.14
PTPA-223ENST00000452489 ANO6Q4KMQ2 910 aa22.15■■□□□ 1.14
PTPA-223ENST00000452489 TEX35Q5T0J7 233 aa22.15■■□□□ 1.14
PTPA-223ENST00000452489 TSHZ3Q63HK5 1081 aa22.15■■□□□ 1.14
PTPA-223ENST00000452489 ANO2Q9NQ90 1003 aa22.15■■□□□ 1.14
PTPA-223ENST00000452489 CKAP2LQ8IYA6 745 aa22.15■■□□□ 1.14
PTPA-223ENST00000452489 RAD50Q92878 1312 aa22.15■■□□□ 1.14
PTPA-223ENST00000452489 LARP6Q9BRS8 491 aaKnown RBP22.15■■□□□ 1.14
PTPA-223ENST00000452489 ESYT1Q9BSJ8 1104 aa22.15■■□□□ 1.14
PTPA-223ENST00000452489 TOMM22Q9NS69 142 aa22.15■■□□□ 1.14
PTPA-223ENST00000452489 ATG3Q9NT62 314 aa22.15■■□□□ 1.14
PTPA-223ENST00000452489 MCCP23508 829 aa22.14■■□□□ 1.14
PTPA-223ENST00000452489 ZSCAN26Q16670 478 aa22.14■■□□□ 1.14
PTPA-223ENST00000452489 HTATSF1O43719 755 aaKnown RBP22.13■■□□□ 1.13
PTPA-223ENST00000452489 LRRC8AQ8IWT6 810 aa22.13■■□□□ 1.13
PTPA-223ENST00000452489 THUMPD2Q9BTF0 503 aaKnown RBP22.13■■□□□ 1.13
PTPA-223ENST00000452489 MAP3K11Q16584 847 aa22.13■■□□□ 1.13
PTPA-223ENST00000452489 DHX37Q8IY37 1157 aaKnown RBP22.13■■□□□ 1.13
PTPA-223ENST00000452489 ZCCHC17Q9NP64 241 aaKnown RBP22.13■■□□□ 1.13
PTPA-223ENST00000452489 APPP05067 770 aa22.12■■□□□ 1.13
PTPA-223ENST00000452489 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.12■■□□□ 1.13
PTPA-223ENST00000452489 ANKRD44Q8N8A2 993 aa22.12■■□□□ 1.13
PTPA-223ENST00000452489 SYCP2Q9BX26 1530 aa22.12■■□□□ 1.13
PTPA-223ENST00000452489 ZNF428Q96B54 188 aa22.12■■□□□ 1.13
PTPA-223ENST00000452489 ADGRF5Q8IZF2 1346 aa22.11■■□□□ 1.13
PTPA-223ENST00000452489 ATP10DQ9P241 1426 aa22.11■■□□□ 1.13
PTPA-223ENST00000452489 RNF20Q5VTR2 975 aa22.11■■□□□ 1.13
PTPA-223ENST00000452489 ANAPC15P60006 121 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms