RNA–Protein interactions for RNA: ENST00000449190.5

RFX3-207, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-207ENST00000449190 KAT6BQ8WYB5 2073 aa12.2□□□□□ -0.46
RFX3-207ENST00000449190 HSP90AB1P08238 724 aaKnown RBP12.2□□□□□ -0.46
RFX3-207ENST00000449190 ANO8Q9HCE9 1232 aaPredicted RBP12.2□□□□□ -0.46
RFX3-207ENST00000449190 HMOX1P09601 288 aa12.19□□□□□ -0.46
RFX3-207ENST00000449190 MPRIPQ6WCQ1 1025 aa12.19□□□□□ -0.46
RFX3-207ENST00000449190 AEBP1Q8IUX7 1158 aa12.19□□□□□ -0.46
RFX3-207ENST00000449190 SMARCC1Q92922 1105 aaPredicted RBP12.19□□□□□ -0.46
RFX3-207ENST00000449190 LRRC4BQ9NT99 713 aa12.19□□□□□ -0.46
RFX3-207ENST00000449190 NHSQ6T4R5 1651 aa12.19□□□□□ -0.46
RFX3-207ENST00000449190 CCER2I3L3R5 266 aa12.18□□□□□ -0.46
RFX3-207ENST00000449190 MIER1Q8N108 512 aa12.18□□□□□ -0.46
RFX3-207ENST00000449190 PIGBQ92521 554 aa12.18□□□□□ -0.46
RFX3-207ENST00000449190 DCAF5Q96JK2 942 aa12.18□□□□□ -0.46
RFX3-207ENST00000449190 RGPD3A6NKT7 1758 aaPredicted RBP12.18□□□□□ -0.46
RFX3-207ENST00000449190 RGPD4Q7Z3J3 1758 aa12.18□□□□□ -0.46
RFX3-207ENST00000449190 RREB1Q92766 1687 aa12.17□□□□□ -0.46
RFX3-207ENST00000449190 ERVV-2B6SEH9 535 aa12.17□□□□□ -0.46
RFX3-207ENST00000449190 FCHSD2O94868 740 aa12.17□□□□□ -0.46
RFX3-207ENST00000449190 ZNF530Q6P9A1 599 aaPredicted RBP12.17□□□□□ -0.46
RFX3-207ENST00000449190 KDRP35968 1356 aa12.17□□□□□ -0.46
RFX3-207ENST00000449190 ATXN8OSP0DMR3 200 aa12.16□□□□□ -0.46
RFX3-207ENST00000449190 C1orf141Q5JVX7 400 aa12.16□□□□□ -0.46
RFX3-207ENST00000449190 SPON1Q9HCB6 807 aa12.16□□□□□ -0.46
RFX3-207ENST00000449190 TMOD3Q9NYL9 352 aa12.16□□□□□ -0.46
RFX3-207ENST00000449190 CCNL1Q9UK58 526 aaPredicted RBP12.16□□□□□ -0.46
RFX3-207ENST00000449190 COL3A1P02461 1466 aaPredicted RBP12.15□□□□□ -0.46
RFX3-207ENST00000449190 NUP188Q5SRE5 1749 aa12.15□□□□□ -0.46
RFX3-207ENST00000449190 CCDC184Q52MB2 194 aa12.15□□□□□ -0.46
RFX3-207ENST00000449190 SHANK3Q9BYB0 1731 aa12.14□□□□□ -0.47
RFX3-207ENST00000449190 ZBTB22O15209 634 aa12.14□□□□□ -0.47
RFX3-207ENST00000449190 PRKAR2BP31323 418 aa12.14□□□□□ -0.47
RFX3-207ENST00000449190 KCNQ4P56696 695 aa12.14□□□□□ -0.47
RFX3-207ENST00000449190 AKAP4Q5JQC9 854 aa12.14□□□□□ -0.47
RFX3-207ENST00000449190 ADAMTS8Q9UP79 889 aa12.14□□□□□ -0.47
RFX3-207ENST00000449190 BTAF1O14981 1849 aa12.14□□□□□ -0.47
RFX3-207ENST00000449190 MAPK8IP3Q9UPT6 1336 aa12.13□□□□□ -0.47
RFX3-207ENST00000449190 CABP4P57796 275 aa12.13□□□□□ -0.47
RFX3-207ENST00000449190 ZNF827Q17R98 1081 aa12.13□□□□□ -0.47
RFX3-207ENST00000449190 FAM9BQ8IZU0 186 aa12.13□□□□□ -0.47
RFX3-207ENST00000449190 PNISRQ8TF01 805 aaKnown RBP12.13□□□□□ -0.47
RFX3-207ENST00000449190 SLC16A10Q8TF71 515 aa12.13□□□□□ -0.47
RFX3-207ENST00000449190 PDGFDQ9GZP0 370 aaPredicted RBP12.13□□□□□ -0.47
RFX3-207ENST00000449190 RSPH6AQ9H0K4 717 aa12.13□□□□□ -0.47
RFX3-207ENST00000449190 SSUH2Q9Y2M2 353 aa12.13□□□□□ -0.47
RFX3-207ENST00000449190 PKD1L3Q7Z443 1732 aa12.13□□□□□ -0.47
RFX3-207ENST00000449190 PALLDQ8WX93 1383 aa12.13□□□□□ -0.47
RFX3-207ENST00000449190 MTHFSDQ2M296 383 aaKnown RBP12.12□□□□□ -0.47
RFX3-207ENST00000449190 GAS2L2Q8NHY3 880 aa12.12□□□□□ -0.47
RFX3-207ENST00000449190 ATG3Q9NT62 314 aa12.12□□□□□ -0.47
RFX3-207ENST00000449190 TFCP2L1Q9NZI6 479 aa12.12□□□□□ -0.47
RFX3-207ENST00000449190 ASAP1Q9ULH1 1129 aa12.12□□□□□ -0.47
RFX3-207ENST00000449190 LOC102724428A0A0B4J2F2 783 aa12.11□□□□□ -0.47
RFX3-207ENST00000449190 SIK1P57059 783 aa12.11□□□□□ -0.47
RFX3-207ENST00000449190 CHADLQ6NUI6 762 aa12.11□□□□□ -0.47
RFX3-207ENST00000449190 NFATC2IPQ8NCF5 419 aa12.11□□□□□ -0.47
RFX3-207ENST00000449190 RUNDC1Q96C34 613 aa12.11□□□□□ -0.47
RFX3-207ENST00000449190 MTFR1LQ9H019 292 aa12.11□□□□□ -0.47
RFX3-207ENST00000449190 RNMTO43148 476 aaKnown RBP12.1□□□□□ -0.47
RFX3-207ENST00000449190 ZBTB7AO95365 584 aa12.1□□□□□ -0.47
RFX3-207ENST00000449190 FLAD1Q8NFF5 587 aa12.1□□□□□ -0.47
RFX3-207ENST00000449190 LGR6Q9HBX8 967 aa12.1□□□□□ -0.47
RFX3-207ENST00000449190 DOT1LQ8TEK3 1739 aa12.1□□□□□ -0.47
RFX3-207ENST00000449190 ATP6V1AP38606 617 aa12.09□□□□□ -0.47
RFX3-207ENST00000449190 MKRN4PQ13434 485 aaPredicted RBP12.09□□□□□ -0.47
RFX3-207ENST00000449190 CCDC146Q8IYE0 955 aa12.09□□□□□ -0.47
RFX3-207ENST00000449190 PPP1R1BQ9UD71 204 aaPredicted RBP12.09□□□□□ -0.47
RFX3-207ENST00000449190 PNPLA7Q6ZV29 1317 aa12.09□□□□□ -0.47
RFX3-207ENST00000449190 LRP5O75197 1615 aa12.08□□□□□ -0.48
RFX3-207ENST00000449190 PTGER2P43116 358 aa12.08□□□□□ -0.48
RFX3-207ENST00000449190 RTF1Q92541 710 aaKnown RBP12.08□□□□□ -0.48
RFX3-207ENST00000449190 PHACTR3Q96KR7 559 aa12.08□□□□□ -0.48
RFX3-207ENST00000449190 PLEKHF1Q96S99 279 aa12.08□□□□□ -0.48
RFX3-207ENST00000449190 SLC52A2Q9HAB3 445 aa12.08□□□□□ -0.48
RFX3-207ENST00000449190 GNAT3A8MTJ3 354 aa12.07□□□□□ -0.48
RFX3-207ENST00000449190 KDM6AO15550 1401 aaPredicted RBP12.07□□□□□ -0.48
RFX3-207ENST00000449190 NFE2L2Q16236 605 aa12.07□□□□□ -0.48
RFX3-207ENST00000449190 COL23A1Q86Y22 540 aaPredicted RBP12.07□□□□□ -0.48
RFX3-207ENST00000449190 POTEIP0CG38 1075 aa12.06□□□□□ -0.48
RFX3-207ENST00000449190 LMOD3Q0VAK6 560 aa12.06□□□□□ -0.48
RFX3-207ENST00000449190 ITPK1Q13572 414 aa12.06□□□□□ -0.48
RFX3-207ENST00000449190 RC3H1Q5TC82 1133 aaKnown RBP12.06□□□□□ -0.48
RFX3-207ENST00000449190 AK7Q96M32 723 aa12.06□□□□□ -0.48
RFX3-207ENST00000449190 SGIP1Q9BQI5 828 aa12.06□□□□□ -0.48
RFX3-207ENST00000449190 PAPPAQ13219 1627 aa12.06□□□□□ -0.48
RFX3-207ENST00000449190 LY75O60449 1722 aa12.06□□□□□ -0.48
RFX3-207ENST00000449190 ITGB4P16144 1822 aa12.05□□□□□ -0.48
RFX3-207ENST00000449190 HTATSF1O43719 755 aaKnown RBP12.05□□□□□ -0.48
RFX3-207ENST00000449190 RIPK4P57078 832 aa12.05□□□□□ -0.48
RFX3-207ENST00000449190 NEUROD2Q15784 382 aa12.05□□□□□ -0.48
RFX3-207ENST00000449190 LINC00116Q8NCU8 138 aa12.05□□□□□ -0.48
RFX3-207ENST00000449190 IL17REQ8NFR9 667 aa12.05□□□□□ -0.48
RFX3-207ENST00000449190 SLC4A9Q96Q91 983 aa12.05□□□□□ -0.48
RFX3-207ENST00000449190 TOGARAM1Q9Y4F4 1720 aa12.05□□□□□ -0.48
RFX3-207ENST00000449190 APAF1O14727 1248 aa12.04□□□□□ -0.48
RFX3-207ENST00000449190 PTCD1O75127 700 aaKnown RBP12.04□□□□□ -0.48
RFX3-207ENST00000449190 POLD1P28340 1107 aa12.04□□□□□ -0.48
RFX3-207ENST00000449190 TMPOP42166 694 aaKnown RBP12.04□□□□□ -0.48
RFX3-207ENST00000449190 ARXQ96QS3 562 aa12.04□□□□□ -0.48
RFX3-207ENST00000449190 MAP3K5Q99683 1374 aa12.04□□□□□ -0.48
RFX3-207ENST00000449190 SSFA2P28290 1259 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms