RNA–Protein interactions for RNA: ENST00000447310.5

ZNF550-204, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 4,305 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-204ENST00000447310 CKAP2LQ8IYA6 745 aa13.36□□□□□ -0.27
ZNF550-204ENST00000447310 LMBRD1Q9NUN5 540 aa13.36□□□□□ -0.27
ZNF550-204ENST00000447310 EIF4G3O43432 1585 aaKnown RBP13.35□□□□□ -0.27
ZNF550-204ENST00000447310 ZNF445P59923 1031 aa13.35□□□□□ -0.27
ZNF550-204ENST00000447310 TOMM22Q9NS69 142 aa13.35□□□□□ -0.27
ZNF550-204ENST00000447310 PKP1Q13835 747 aa13.35□□□□□ -0.27
ZNF550-204ENST00000447310 DNAJC2Q99543 621 aaKnown RBP13.35□□□□□ -0.27
ZNF550-204ENST00000447310 ZHX1Q9UKY1 873 aaPredicted RBP13.35□□□□□ -0.27
ZNF550-204ENST00000447310 CNPY2Q9Y2B0 182 aa13.35□□□□□ -0.27
ZNF550-204ENST00000447310 NOLC1Q14978 699 aaKnown RBP eCLIP13.35□□□□□ -0.27
ZNF550-204ENST00000447310 PRDM15P57071 1507 aaPredicted RBP13.35□□□□□ -0.27
ZNF550-204ENST00000447310 HIP1O00291 1037 aa13.35□□□□□ -0.27
ZNF550-204ENST00000447310 GLRX3O76003 335 aaKnown RBP13.35□□□□□ -0.27
ZNF550-204ENST00000447310 ERC1Q8IUD2 1116 aa13.35□□□□□ -0.27
ZNF550-204ENST00000447310 CHMP4CQ96CF2 233 aa13.35□□□□□ -0.27
ZNF550-204ENST00000447310 SLC26A8Q96RN1 970 aa13.34□□□□□ -0.27
ZNF550-204ENST00000447310 UBE2HP62256 183 aa13.34□□□□□ -0.27
ZNF550-204ENST00000447310 PPP6R1Q9UPN7 881 aa13.34□□□□□ -0.27
ZNF550-204ENST00000447310 GNAT3A8MTJ3 354 aa13.34□□□□□ -0.27
ZNF550-204ENST00000447310 ANKRD1Q15327 319 aa13.34□□□□□ -0.27
ZNF550-204ENST00000447310 HSP90AB2PQ58FF8 381 aa13.34□□□□□ -0.27
ZNF550-204ENST00000447310 CHAMP1Q96JM3 812 aa13.34□□□□□ -0.27
ZNF550-204ENST00000447310 TFIP11Q9UBB9 837 aaKnown RBP13.34□□□□□ -0.27
ZNF550-204ENST00000447310 RAB11FIP3O75154 756 aa13.33□□□□□ -0.27
ZNF550-204ENST00000447310 GSPT1P15170 499 aaKnown RBP13.33□□□□□ -0.27
ZNF550-204ENST00000447310 DDX11Q96FC9 970 aa13.33□□□□□ -0.27
ZNF550-204ENST00000447310 NAT10Q9H0A0 1025 aaKnown RBP13.33□□□□□ -0.27
ZNF550-204ENST00000447310 CD109Q6YHK3 1445 aa13.33□□□□□ -0.27
ZNF550-204ENST00000447310 SMC2O95347 1197 aa13.33□□□□□ -0.28
ZNF550-204ENST00000447310 PSME1Q06323 249 aa13.33□□□□□ -0.28
ZNF550-204ENST00000447310 ARHGEF5Q12774 1597 aa13.33□□□□□ -0.28
ZNF550-204ENST00000447310 TAF7Q15545 349 aaPredicted RBP13.33□□□□□ -0.28
ZNF550-204ENST00000447310 SYNE3Q6ZMZ3 975 aa13.33□□□□□ -0.28
ZNF550-204ENST00000447310 MNS1Q8NEH6 495 aa13.33□□□□□ -0.28
ZNF550-204ENST00000447310 ERVK-7P63135 1459 aa13.33□□□□□ -0.28
ZNF550-204ENST00000447310 GJB2P29033 226 aa13.33□□□□□ -0.28
ZNF550-204ENST00000447310 UVSSAQ2YD98 709 aa13.33□□□□□ -0.28
ZNF550-204ENST00000447310 C16orf45Q96MC5 204 aaPredicted RBP13.33□□□□□ -0.28
ZNF550-204ENST00000447310 LRRIQ1Q96JM4 1722 aa13.32□□□□□ -0.28
ZNF550-204ENST00000447310 ZSCAN22P10073 491 aaPredicted RBP13.32□□□□□ -0.28
ZNF550-204ENST00000447310 ME1P48163 572 aa13.32□□□□□ -0.28
ZNF550-204ENST00000447310 PPP4R3BQ5MIZ7 849 aa13.32□□□□□ -0.28
ZNF550-204ENST00000447310 PPP1R42Q7Z4L9 355 aa13.32□□□□□ -0.28
ZNF550-204ENST00000447310 TMEM63CQ9P1W3 806 aa13.32□□□□□ -0.28
ZNF550-204ENST00000447310 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.32□□□□□ -0.28
ZNF550-204ENST00000447310 SPDYE4A6NLX3 237 aa13.32□□□□□ -0.28
ZNF550-204ENST00000447310 NCBP3Q53F19 620 aaKnown RBP13.32□□□□□ -0.28
ZNF550-204ENST00000447310 TTC5Q8N0Z6 440 aa13.32□□□□□ -0.28
ZNF550-204ENST00000447310 ANAPC15P60006 121 aa13.32□□□□□ -0.28
ZNF550-204ENST00000447310 CCDC34Q96HJ3 373 aa13.32□□□□□ -0.28
ZNF550-204ENST00000447310 PRIMPOLQ96LW4 560 aa13.32□□□□□ -0.28
ZNF550-204ENST00000447310 CPLX2Q6PUV4 134 aaKnown RBP13.31□□□□□ -0.28
ZNF550-204ENST00000447310 PPP1R9BQ96SB3 815 aa13.31□□□□□ -0.28
ZNF550-204ENST00000447310 SH2B1Q9NRF2 756 aaPredicted RBP13.3□□□□□ -0.28
ZNF550-204ENST00000447310 FAM177BA6PVY3 158 aa13.3□□□□□ -0.28
ZNF550-204ENST00000447310 BOLA2Q9H3K6 86 aa13.3□□□□□ -0.28
ZNF550-204ENST00000447310 SYNMO15061 1565 aa13.3□□□□□ -0.28
ZNF550-204ENST00000447310 APPP05067 770 aa13.3□□□□□ -0.28
ZNF550-204ENST00000447310 ZNF530Q6P9A1 599 aaPredicted RBP13.3□□□□□ -0.28
ZNF550-204ENST00000447310 NECAB1Q8N987 351 aa13.3□□□□□ -0.28
ZNF550-204ENST00000447310 PLEKHF1Q96S99 279 aa13.3□□□□□ -0.28
ZNF550-204ENST00000447310 SCAND2PQ9GZW5 306 aaPredicted RBP13.3□□□□□ -0.28
ZNF550-204ENST00000447310 ATP10AO60312 1499 aa13.29□□□□□ -0.28
ZNF550-204ENST00000447310 KDM4AO75164 1064 aa13.29□□□□□ -0.28
ZNF550-204ENST00000447310 CHMLP26374 656 aa13.29□□□□□ -0.28
ZNF550-204ENST00000447310 EIF4A2Q14240 407 aaKnown RBP13.29□□□□□ -0.28
ZNF550-204ENST00000447310 WASHC4Q2M389 1173 aa13.29□□□□□ -0.28
ZNF550-204ENST00000447310 ARGLU1Q9NWB6 273 aaPredicted RBP13.29□□□□□ -0.28
ZNF550-204ENST00000447310 TNNT1P13805 278 aa13.29□□□□□ -0.28
ZNF550-204ENST00000447310 DNM1Q05193 864 aaKnown RBP13.29□□□□□ -0.28
ZNF550-204ENST00000447310 STK38Q15208 465 aa13.29□□□□□ -0.28
ZNF550-204ENST00000447310 RHPN1Q8TCX5 695 aa13.29□□□□□ -0.28
ZNF550-204ENST00000447310 CCDC8Q9H0W5 538 aaPredicted RBP13.29□□□□□ -0.28
ZNF550-204ENST00000447310 KDM5AP29375 1690 aaKnown RBP13.29□□□□□ -0.28
ZNF550-204ENST00000447310 TEX35Q5T0J7 233 aa13.29□□□□□ -0.28
ZNF550-204ENST00000447310 G2E3Q7L622 706 aa13.29□□□□□ -0.28
ZNF550-204ENST00000447310 CFAP45Q9UL16 551 aa13.29□□□□□ -0.28
ZNF550-204ENST00000447310 ERBB4Q15303 1308 aa13.28□□□□□ -0.28
ZNF550-204ENST00000447310 USHBP1Q8N6Y0 703 aa13.28□□□□□ -0.28
ZNF550-204ENST00000447310 INTS4Q96HW7 963 aaKnown RBP13.28□□□□□ -0.28
ZNF550-204ENST00000447310 TCEANC2Q96MN5 208 aa13.28□□□□□ -0.28
ZNF550-204ENST00000447310 SAMD9LQ8IVG5 1584 aa13.28□□□□□ -0.28
ZNF550-204ENST00000447310 NCKAP5LQ9HCH0 1330 aa13.28□□□□□ -0.28
ZNF550-204ENST00000447310 FOXO3O43524 673 aa13.28□□□□□ -0.28
ZNF550-204ENST00000447310 DTNBO60941 627 aa13.28□□□□□ -0.28
ZNF550-204ENST00000447310 ATP8B2P98198 1209 aa13.28□□□□□ -0.28
ZNF550-204ENST00000447310 TRDNQ13061 729 aa13.28□□□□□ -0.28
ZNF550-204ENST00000447310 SBNO2Q9Y2G9 1366 aa13.28□□□□□ -0.28
ZNF550-204ENST00000447310 RALYLQ86SE5 291 aaKnown RBP13.28□□□□□ -0.28
ZNF550-204ENST00000447310 ZNF396Q96N95 335 aaPredicted RBP13.28□□□□□ -0.28
ZNF550-204ENST00000447310 MSH6P52701 1360 aa13.28□□□□□ -0.28
ZNF550-204ENST00000447310 ANXA1P04083 346 aa13.27□□□□□ -0.28
ZNF550-204ENST00000447310 TRIM29Q14134 588 aa13.27□□□□□ -0.28
ZNF550-204ENST00000447310 PLEKHO1Q53GL0 409 aaPredicted RBP13.27□□□□□ -0.28
ZNF550-204ENST00000447310 TRPM1Q7Z4N2 1603 aa13.27□□□□□ -0.28
ZNF550-204ENST00000447310 CFAP65Q6ZU64 1925 aaKnown RBP13.27□□□□□ -0.28
ZNF550-204ENST00000447310 PPIP5K1Q6PFW1 1433 aa13.27□□□□□ -0.28
ZNF550-204ENST00000447310 LRRFIP1Q32MZ4 808 aaKnown RBP13.27□□□□□ -0.28
ZNF550-204ENST00000447310 DNAAF4Q8WXU2 420 aa13.27□□□□□ -0.28
ZNF550-204ENST00000447310 CLIP2Q9UDT6 1046 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms