RNA–Protein interactions for RNA: ENST00000446046.5

FN1-212, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-212ENST00000446046 BAG3O95817 575 aa13.76□□□□□ -0.21
FN1-212ENST00000446046 RFC4P35249 363 aa13.76□□□□□ -0.21
FN1-212ENST00000446046 EXOSC9Q06265 439 aaKnown RBP13.76□□□□□ -0.21
FN1-212ENST00000446046 PPFIBP1Q86W92 1011 aa13.76□□□□□ -0.21
FN1-212ENST00000446046 KRT85P78386 507 aa13.76□□□□□ -0.21
FN1-212ENST00000446046 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.76□□□□□ -0.21
FN1-212ENST00000446046 PHAXQ9H814 394 aaKnown RBP13.76□□□□□ -0.21
FN1-212ENST00000446046 CFAP43Q8NDM7 1665 aa13.76□□□□□ -0.21
FN1-212ENST00000446046 GOLGA6L10A6NI86 522 aa13.76□□□□□ -0.21
FN1-212ENST00000446046 ZGPATQ8N5A5 531 aaKnown RBP13.76□□□□□ -0.21
FN1-212ENST00000446046 CBFA2T2O43439 604 aa13.76□□□□□ -0.21
FN1-212ENST00000446046 HMGB1P09429 215 aaKnown RBP13.76□□□□□ -0.21
FN1-212ENST00000446046 GSE1Q14687 1217 aa13.76□□□□□ -0.21
FN1-212ENST00000446046 TTF1Q15361 905 aaPredicted RBP13.76□□□□□ -0.21
FN1-212ENST00000446046 BICDL1Q6ZP65 573 aa13.76□□□□□ -0.21
FN1-212ENST00000446046 RRS1Q15050 365 aaKnown RBP13.75□□□□□ -0.21
FN1-212ENST00000446046 NOM1Q5C9Z4 860 aaKnown RBP13.75□□□□□ -0.21
FN1-212ENST00000446046 MPRIPQ6WCQ1 1025 aa13.75□□□□□ -0.21
FN1-212ENST00000446046 ZNF397Q8NF99 534 aaPredicted RBP13.75□□□□□ -0.21
FN1-212ENST00000446046 ZSCAN31Q96LW9 406 aaPredicted RBP13.75□□□□□ -0.21
FN1-212ENST00000446046 PHF8Q9UPP1 1060 aa13.75□□□□□ -0.21
FN1-212ENST00000446046 WDR97A6NE52 1622 aa13.75□□□□□ -0.21
FN1-212ENST00000446046 ATP2B1P20020 1258 aa13.75□□□□□ -0.21
FN1-212ENST00000446046 GBP2P32456 591 aaPredicted RBP13.75□□□□□ -0.21
FN1-212ENST00000446046 DDX46Q7L014 1031 aaKnown RBP13.75□□□□□ -0.21
FN1-212ENST00000446046 ZNF444Q8N0Y2 327 aaPredicted RBP13.75□□□□□ -0.21
FN1-212ENST00000446046 DRC1Q96MC2 740 aa13.75□□□□□ -0.21
FN1-212ENST00000446046 SPDYE4A6NLX3 237 aa13.75□□□□□ -0.21
FN1-212ENST00000446046 FMNL2Q96PY5 1086 aa13.75□□□□□ -0.21
FN1-212ENST00000446046 AMOTL2Q9Y2J4 779 aa13.75□□□□□ -0.21
FN1-212ENST00000446046 IDH1O75874 414 aaKnown RBP13.74□□□□□ -0.21
FN1-212ENST00000446046 CCDC39Q9UFE4 941 aa13.74□□□□□ -0.21
FN1-212ENST00000446046 NAPBQ9H115 298 aa13.74□□□□□ -0.21
FN1-212ENST00000446046 ME1P48163 572 aa13.74□□□□□ -0.21
FN1-212ENST00000446046 CCDC12Q8WUD4 166 aaPredicted RBP13.74□□□□□ -0.21
FN1-212ENST00000446046 NEFHP12036 1026 aa13.74□□□□□ -0.21
FN1-212ENST00000446046 TNRQ92752 1358 aa13.74□□□□□ -0.21
FN1-212ENST00000446046 LDHCP07864 332 aa13.74□□□□□ -0.21
FN1-212ENST00000446046 FBXO3Q9UK99 471 aa13.74□□□□□ -0.21
FN1-212ENST00000446046 NPHP3Q7Z494 1330 aa13.74□□□□□ -0.21
FN1-212ENST00000446046 GLRX3O76003 335 aaKnown RBP13.74□□□□□ -0.21
FN1-212ENST00000446046 ANKRD18BA2A2Z9 1011 aa13.73□□□□□ -0.21
FN1-212ENST00000446046 TRIM5Q9C035 493 aa13.73□□□□□ -0.21
FN1-212ENST00000446046 HLA-DOAP06340 250 aa13.73□□□□□ -0.21
FN1-212ENST00000446046 CCDC192P0DO97 292 aa13.73□□□□□ -0.21
FN1-212ENST00000446046 PTCD1O75127 700 aaKnown RBP13.73□□□□□ -0.21
FN1-212ENST00000446046 XPCQ01831 940 aaPredicted RBP13.73□□□□□ -0.21
FN1-212ENST00000446046 TANGO6Q9C0B7 1094 aa13.73□□□□□ -0.21
FN1-212ENST00000446046 PTPRCP08575 1304 aa13.73□□□□□ -0.21
FN1-212ENST00000446046 SMARCC1Q92922 1105 aaPredicted RBP13.73□□□□□ -0.21
FN1-212ENST00000446046 DHX29Q7Z478 1369 aaKnown RBP13.73□□□□□ -0.21
FN1-212ENST00000446046 GSTO1P78417 241 aa13.73□□□□□ -0.21
FN1-212ENST00000446046 TMEM266Q2M3C6 531 aa13.72□□□□□ -0.21
FN1-212ENST00000446046 KRT28Q7Z3Y7 464 aa13.72□□□□□ -0.21
FN1-212ENST00000446046 RPAP2Q8IXW5 612 aaPredicted RBP13.72□□□□□ -0.21
FN1-212ENST00000446046 IL27Q8NEV9 243 aa13.72□□□□□ -0.21
FN1-212ENST00000446046 TTC21AQ8NDW8 1320 aa13.72□□□□□ -0.21
FN1-212ENST00000446046 MVPQ14764 893 aaKnown RBP13.72□□□□□ -0.21
FN1-212ENST00000446046 SCLT1Q96NL6 688 aa13.72□□□□□ -0.21
FN1-212ENST00000446046 WASLO00401 505 aaPredicted RBP13.72□□□□□ -0.21
FN1-212ENST00000446046 UHRF1BP1LA0JNW5 1464 aa13.71□□□□□ -0.21
FN1-212ENST00000446046 CTCFLQ8NI51 663 aaPredicted RBP13.71□□□□□ -0.21
FN1-212ENST00000446046 B4DLN1 442 aa13.71□□□□□ -0.21
FN1-212ENST00000446046 KIF20AO95235 890 aa13.71□□□□□ -0.21
FN1-212ENST00000446046 SERPINC1P01008 464 aa13.71□□□□□ -0.21
FN1-212ENST00000446046 MRPL12P52815 198 aaKnown RBP13.71□□□□□ -0.21
FN1-212ENST00000446046 DBF4Q9UBU7 674 aaPredicted RBP13.71□□□□□ -0.21
FN1-212ENST00000446046 HSP90AA2PQ14568 343 aaPredicted RBP13.71□□□□□ -0.21
FN1-212ENST00000446046 ALDH1L2Q3SY69 923 aa13.71□□□□□ -0.21
FN1-212ENST00000446046 CCDC191Q8NCU4 936 aa13.71□□□□□ -0.21
FN1-212ENST00000446046 EZRP15311 586 aaKnown RBP13.71□□□□□ -0.21
FN1-212ENST00000446046 TMPOP42166 694 aaKnown RBP13.71□□□□□ -0.21
FN1-212ENST00000446046 KIF5BP33176 963 aa13.71□□□□□ -0.22
FN1-212ENST00000446046 BRPF1P55201 1214 aaPredicted RBP13.71□□□□□ -0.22
FN1-212ENST00000446046 FEZ1Q99689 392 aa13.71□□□□□ -0.22
FN1-212ENST00000446046 NASPP49321 788 aaPredicted RBP13.7□□□□□ -0.22
FN1-212ENST00000446046 NYXQ9GZU5 481 aa13.7□□□□□ -0.22
FN1-212ENST00000446046 RSPH6AQ9H0K4 717 aa13.7□□□□□ -0.22
FN1-212ENST00000446046 SCAF11Q99590 1463 aaKnown RBP13.7□□□□□ -0.22
FN1-212ENST00000446046 ARID3AQ99856 593 aa13.7□□□□□ -0.22
FN1-212ENST00000446046 PYM1Q9BRP8 204 aaKnown RBP13.7□□□□□ -0.22
FN1-212ENST00000446046 TRMT112Q9UI30 125 aaKnown RBP13.7□□□□□ -0.22
FN1-212ENST00000446046 JAKMIP3Q5VZ66 844 aa13.7□□□□□ -0.22
FN1-212ENST00000446046 LARP1BQ659C4 914 aaKnown RBP13.7□□□□□ -0.22
FN1-212ENST00000446046 TSG101Q99816 390 aa13.7□□□□□ -0.22
FN1-212ENST00000446046 BCL11BQ9C0K0 894 aaPredicted RBP13.7□□□□□ -0.22
FN1-212ENST00000446046 DUSP27Q5VZP5 1158 aa13.69□□□□□ -0.22
FN1-212ENST00000446046 VPS36Q86VN1 386 aa13.69□□□□□ -0.22
FN1-212ENST00000446046 CCDC181Q5TID7 509 aa13.69□□□□□ -0.22
FN1-212ENST00000446046 CATIPQ7Z7H3 387 aa13.69□□□□□ -0.22
FN1-212ENST00000446046 SMTNL1A8MU46 457 aa13.69□□□□□ -0.22
FN1-212ENST00000446046 PDE4BQ07343 736 aa13.69□□□□□ -0.22
FN1-212ENST00000446046 NBPF1Q3BBV0 1214 aa13.69□□□□□ -0.22
FN1-212ENST00000446046 STXBP4Q6ZWJ1 553 aa13.69□□□□□ -0.22
FN1-212ENST00000446046 MTERF4Q7Z6M4 381 aaKnown RBP13.69□□□□□ -0.22
FN1-212ENST00000446046 CHD1LQ86WJ1 897 aa13.69□□□□□ -0.22
FN1-212ENST00000446046 IFNL2Q8IZJ0 200 aa13.69□□□□□ -0.22
FN1-212ENST00000446046 BAG4O95429 457 aaKnown RBP13.69□□□□□ -0.22
FN1-212ENST00000446046 OGFOD1Q8N543 542 aa13.69□□□□□ -0.22
FN1-212ENST00000446046 HDAC9Q9UKV0 1011 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms