RNA–Protein interactions for RNA: ENST00000445855.1

R3HDM1-211, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 670 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-211ENST00000445855 LGR5O75473 907 aa7.03□□□□□ -1.28
R3HDM1-211ENST00000445855 FKBP5Q13451 457 aaPredicted RBP7.03□□□□□ -1.28
R3HDM1-211ENST00000445855 Q6ZVU0 165 aa7.03□□□□□ -1.28
R3HDM1-211ENST00000445855 TNS4Q8IZW8 715 aa7.03□□□□□ -1.28
R3HDM1-211ENST00000445855 CYP4X1Q8N118 509 aa7.03□□□□□ -1.28
R3HDM1-211ENST00000445855 RGS22Q8NE09 1264 aa7.03□□□□□ -1.28
R3HDM1-211ENST00000445855 XAGE2Q96GT9 111 aa7.03□□□□□ -1.28
R3HDM1-211ENST00000445855 KLF16Q9BXK1 252 aaPredicted RBP7.03□□□□□ -1.28
R3HDM1-211ENST00000445855 ARHGEF10LQ9HCE6 1279 aa7.03□□□□□ -1.28
R3HDM1-211ENST00000445855 SERTAD1Q9UHV2 236 aa7.03□□□□□ -1.28
R3HDM1-211ENST00000445855 A6NJY4 79 aa7.02□□□□□ -1.29
R3HDM1-211ENST00000445855 ZIC2O95409 532 aaPredicted RBP7.02□□□□□ -1.29
R3HDM1-211ENST00000445855 SCNN1AP37088 669 aa7.02□□□□□ -1.29
R3HDM1-211ENST00000445855 SMTNP53814 917 aa7.02□□□□□ -1.29
R3HDM1-211ENST00000445855 MTFR1Q15390 333 aa7.02□□□□□ -1.29
R3HDM1-211ENST00000445855 SCG3Q8WXD2 468 aaKnown RBP7.02□□□□□ -1.29
R3HDM1-211ENST00000445855 RAB6BQ9NRW1 208 aa7.02□□□□□ -1.29
R3HDM1-211ENST00000445855 TOR4AQ9NXH8 423 aa7.02□□□□□ -1.29
R3HDM1-211ENST00000445855 ATAD2Q6PL18 1390 aa7.01□□□□□ -1.29
R3HDM1-211ENST00000445855 J3QL48 77 aa7.01□□□□□ -1.29
R3HDM1-211ENST00000445855 IL2RAP01589 272 aa7.01□□□□□ -1.29
R3HDM1-211ENST00000445855 WDR4P57081 412 aaKnown RBP7.01□□□□□ -1.29
R3HDM1-211ENST00000445855 PRR20EP86478 221 aa7.01□□□□□ -1.29
R3HDM1-211ENST00000445855 PRR20CP86479 221 aa7.01□□□□□ -1.29
R3HDM1-211ENST00000445855 PRR20DP86480 221 aa7.01□□□□□ -1.29
R3HDM1-211ENST00000445855 PRR20BP86481 221 aa7.01□□□□□ -1.29
R3HDM1-211ENST00000445855 PRR20AP86496 221 aa7.01□□□□□ -1.29
R3HDM1-211ENST00000445855 FOXK2Q01167 660 aa7.01□□□□□ -1.29
R3HDM1-211ENST00000445855 CLN3Q13286 438 aa7.01□□□□□ -1.29
R3HDM1-211ENST00000445855 STAG2Q8N3U4 1231 aa7.01□□□□□ -1.29
R3HDM1-211ENST00000445855 ITPKCQ96DU7 683 aa7.01□□□□□ -1.29
R3HDM1-211ENST00000445855 ESYT1Q9BSJ8 1104 aa7.01□□□□□ -1.29
R3HDM1-211ENST00000445855 TSPAN10Q9H1Z9 355 aaPredicted RBP7.01□□□□□ -1.29
R3HDM1-211ENST00000445855 SCHIP1Q9P0W5 487 aaPredicted RBP7.01□□□□□ -1.29
R3HDM1-211ENST00000445855 TNFRSF10AO00220 468 aa7□□□□□ -1.29
R3HDM1-211ENST00000445855 C21orf2O43822 256 aa7□□□□□ -1.29
R3HDM1-211ENST00000445855 TIMP2P16035 220 aa7□□□□□ -1.29
R3HDM1-211ENST00000445855 PTGIRP43119 386 aa7□□□□□ -1.29
R3HDM1-211ENST00000445855 CBLBQ13191 982 aa7□□□□□ -1.29
R3HDM1-211ENST00000445855 SLC9A9Q8IVB4 645 aa7□□□□□ -1.29
R3HDM1-211ENST00000445855 NBPF15Q8N660 670 aa7□□□□□ -1.29
R3HDM1-211ENST00000445855 KDF1Q8NAX2 398 aaPredicted RBP7□□□□□ -1.29
R3HDM1-211ENST00000445855 CNKSR1Q969H4 720 aa7□□□□□ -1.29
R3HDM1-211ENST00000445855 VTI1AQ96AJ9 217 aa7□□□□□ -1.29
R3HDM1-211ENST00000445855 PURBQ96QR8 312 aaKnown RBP7□□□□□ -1.29
R3HDM1-211ENST00000445855 MKNK1Q9BUB5 465 aa7□□□□□ -1.29
R3HDM1-211ENST00000445855 HRH3Q9Y5N1 445 aa7□□□□□ -1.29
R3HDM1-211ENST00000445855 A0A1W2PRU2 124 aa6.99□□□□□ -1.29
R3HDM1-211ENST00000445855 CDK2AP1O14519 115 aa6.99□□□□□ -1.29
R3HDM1-211ENST00000445855 PPP1R12BO60237 982 aaPredicted RBP6.99□□□□□ -1.29
R3HDM1-211ENST00000445855 ABL1P00519 1130 aa6.99□□□□□ -1.29
R3HDM1-211ENST00000445855 SMPD1P17405 629 aa6.99□□□□□ -1.29
R3HDM1-211ENST00000445855 PSMA6P60900 246 aaKnown RBP6.99□□□□□ -1.29
R3HDM1-211ENST00000445855 TLR1Q15399 786 aa6.99□□□□□ -1.29
R3HDM1-211ENST00000445855 GTF3C2Q8WUA4 911 aaPredicted RBP6.99□□□□□ -1.29
R3HDM1-211ENST00000445855 ZFAND3Q9H8U3 227 aa6.99□□□□□ -1.29
R3HDM1-211ENST00000445855 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.99□□□□□ -1.292e-6■■■■■ 96.1
R3HDM1-211ENST00000445855 SEPT3Q9UH03 358 aa6.99□□□□□ -1.29
R3HDM1-211ENST00000445855 ICMTO60725 284 aa6.98□□□□□ -1.29
R3HDM1-211ENST00000445855 SF3B2Q13435 895 aaKnown RBP6.98□□□□□ -1.29
R3HDM1-211ENST00000445855 TRIM67Q6ZTA4 783 aa6.98□□□□□ -1.29
R3HDM1-211ENST00000445855 NPM2Q86SE8 214 aaKnown RBP6.98□□□□□ -1.29
R3HDM1-211ENST00000445855 MEIOBQ8N635 442 aa6.98□□□□□ -1.29
R3HDM1-211ENST00000445855 CHMP3Q9Y3E7 222 aa6.98□□□□□ -1.29
R3HDM1-211ENST00000445855 H3BRB1 525 aa6.97□□□□□ -1.29
R3HDM1-211ENST00000445855 ZNF211Q13398 564 aaPredicted RBP6.97□□□□□ -1.29
R3HDM1-211ENST00000445855 CAPN12Q6ZSI9 719 aa6.97□□□□□ -1.29
R3HDM1-211ENST00000445855 GLYCTKQ8IVS8 523 aa6.97□□□□□ -1.29
R3HDM1-211ENST00000445855 HELQQ8TDG4 1101 aa6.97□□□□□ -1.29
R3HDM1-211ENST00000445855 CHMP7Q8WUX9 453 aaPredicted RBP6.97□□□□□ -1.29
R3HDM1-211ENST00000445855 NLRP3Q96P20 1036 aa6.97□□□□□ -1.29
R3HDM1-211ENST00000445855 C2orf49Q9BVC5 232 aaPredicted RBP6.97□□□□□ -1.29
R3HDM1-211ENST00000445855 FHDC1Q9C0D6 1143 aaPredicted RBP6.97□□□□□ -1.29
R3HDM1-211ENST00000445855 TUT1Q9H6E5 874 aaKnown RBP6.97□□□□□ -1.29
R3HDM1-211ENST00000445855 BIN2Q9UBW5 565 aaPredicted RBP6.97□□□□□ -1.29
R3HDM1-211ENST00000445855 IQSEC3Q9UPP2 1182 aaPredicted RBP6.97□□□□□ -1.29
R3HDM1-211ENST00000445855 MEN1O00255 615 aa6.96□□□□□ -1.3
R3HDM1-211ENST00000445855 ERCC3P19447 782 aa6.96□□□□□ -1.3
R3HDM1-211ENST00000445855 RELBQ01201 579 aa6.96□□□□□ -1.3
R3HDM1-211ENST00000445855 FKBP4Q02790 459 aaKnown RBP eCLIP6.96□□□□□ -1.3
R3HDM1-211ENST00000445855 CENPCQ03188 943 aa6.96□□□□□ -1.3
R3HDM1-211ENST00000445855 TBCELQ5QJ74 424 aa6.96□□□□□ -1.3
R3HDM1-211ENST00000445855 POTEAQ6S8J7 498 aa6.96□□□□□ -1.3
R3HDM1-211ENST00000445855 AGBL1Q96MI9 1066 aa6.96□□□□□ -1.3
R3HDM1-211ENST00000445855 DNMT3AQ9Y6K1 912 aaPredicted RBP6.96□□□□□ -1.3
R3HDM1-211ENST00000445855 RGS20O76081 388 aa6.95□□□□□ -1.3
R3HDM1-211ENST00000445855 GPC1P35052 558 aa6.95□□□□□ -1.3
R3HDM1-211ENST00000445855 C16orf46Q6P387 395 aa6.95□□□□□ -1.3
R3HDM1-211ENST00000445855 HPS1Q92902 700 aa6.95□□□□□ -1.3
R3HDM1-211ENST00000445855 TSEN34Q9BSV6 310 aaKnown RBP6.95□□□□□ -1.3
R3HDM1-211ENST00000445855 ANO2Q9NQ90 1003 aa6.95□□□□□ -1.3
R3HDM1-211ENST00000445855 GTF2E1P29083 439 aaPredicted RBP6.94□□□□□ -1.3
R3HDM1-211ENST00000445855 HIRAP54198 1017 aaPredicted RBP6.94□□□□□ -1.3
R3HDM1-211ENST00000445855 NAA30Q147X3 362 aaPredicted RBP6.94□□□□□ -1.3
R3HDM1-211ENST00000445855 TEAD4Q15561 434 aa6.94□□□□□ -1.3
R3HDM1-211ENST00000445855 PPARGC1BQ86YN6 1023 aaKnown RBP6.94□□□□□ -1.3
R3HDM1-211ENST00000445855 ZSCAN10Q96SZ4 725 aaPredicted RBP6.94□□□□□ -1.3
R3HDM1-211ENST00000445855 AMOTL2Q9Y2J4 779 aa6.94□□□□□ -1.3
R3HDM1-211ENST00000445855 USP3Q9Y6I4 520 aa6.94□□□□□ -1.3
R3HDM1-211ENST00000445855 SERTM1A2A2V5 107 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms