RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 C1orf141Q5JVX7 400 aa20.94■□□□□ 0.94
LAPTM4B-201ENST00000445593 BTBD11A6QL63 1104 aa20.93■□□□□ 0.94
LAPTM4B-201ENST00000445593 DNAJC5Q9H3Z4 198 aa20.93■□□□□ 0.94
LAPTM4B-201ENST00000445593 DCTPP1Q9H773 170 aa20.93■□□□□ 0.94
LAPTM4B-201ENST00000445593 ZNF142P52746 1687 aaPredicted RBP20.93■□□□□ 0.94
LAPTM4B-201ENST00000445593 VIRMAQ69YN4 1812 aaKnown RBP20.92■□□□□ 0.94
LAPTM4B-201ENST00000445593 PRAMEF22A3QJZ6 481 aa20.92■□□□□ 0.94
LAPTM4B-201ENST00000445593 HTATSF1O43719 755 aaKnown RBP20.92■□□□□ 0.94
LAPTM4B-201ENST00000445593 CHPF2Q9P2E5 772 aa20.92■□□□□ 0.94
LAPTM4B-201ENST00000445593 PLEKHO1Q53GL0 409 aaPredicted RBP20.92■□□□□ 0.94
LAPTM4B-201ENST00000445593 GSPT1P15170 499 aaKnown RBP20.91■□□□□ 0.94
LAPTM4B-201ENST00000445593 TBC1D9Q6ZT07 1266 aa20.91■□□□□ 0.94
LAPTM4B-201ENST00000445593 ATP10DQ9P241 1426 aa20.91■□□□□ 0.94
LAPTM4B-201ENST00000445593 BMP2KLQ5H9B9 411 aa20.91■□□□□ 0.94
LAPTM4B-201ENST00000445593 PLEKHM2Q8IWE5 1019 aa20.91■□□□□ 0.94
LAPTM4B-201ENST00000445593 KIF24Q5T7B8 1368 aa20.91■□□□□ 0.94
LAPTM4B-201ENST00000445593 NFAT5O94916 1531 aa20.9■□□□□ 0.94
LAPTM4B-201ENST00000445593 CCT4P50991 539 aaKnown RBP20.9■□□□□ 0.94
LAPTM4B-201ENST00000445593 C1orf167Q5SNV9 1468 aa20.9■□□□□ 0.94
LAPTM4B-201ENST00000445593 RPAP2Q8IXW5 612 aaPredicted RBP20.9■□□□□ 0.94
LAPTM4B-201ENST00000445593 RGPD2P0DJD1 1756 aa20.9■□□□□ 0.94
LAPTM4B-201ENST00000445593 LRRFIP2Q9Y608 721 aaKnown RBP20.89■□□□□ 0.94
LAPTM4B-201ENST00000445593 PNMA6EA0A0J9YXQ4 647 aa20.89■□□□□ 0.93
LAPTM4B-201ENST00000445593 FOXD4L1Q9NU39 408 aa20.89■□□□□ 0.93
LAPTM4B-201ENST00000445593 GNAI2P04899 355 aa20.88■□□□□ 0.93
LAPTM4B-201ENST00000445593 SLC39A6Q13433 755 aa20.88■□□□□ 0.93
LAPTM4B-201ENST00000445593 EIF4A1P60842 406 aaKnown RBP20.88■□□□□ 0.93
LAPTM4B-201ENST00000445593 PXDNQ92626 1479 aa20.87■□□□□ 0.93
LAPTM4B-201ENST00000445593 AKAP4Q5JQC9 854 aa20.87■□□□□ 0.93
LAPTM4B-201ENST00000445593 RBM42Q9BTD8 480 aaKnown RBP20.86■□□□□ 0.93
LAPTM4B-201ENST00000445593 PI4KAP2A4QPH2 592 aa20.85■□□□□ 0.93
LAPTM4B-201ENST00000445593 RNMTO43148 476 aaKnown RBP20.85■□□□□ 0.93
LAPTM4B-201ENST00000445593 AIMP1Q12904 312 aaKnown RBP20.85■□□□□ 0.93
LAPTM4B-201ENST00000445593 PI4KAP1Q8N8J0 262 aa20.85■□□□□ 0.93
LAPTM4B-201ENST00000445593 HMMRO75330 724 aa20.85■□□□□ 0.93
LAPTM4B-201ENST00000445593 RAPGEF4Q8WZA2 1011 aa20.85■□□□□ 0.93
LAPTM4B-201ENST00000445593 PROSER3Q2NL68 480 aa20.84■□□□□ 0.93
LAPTM4B-201ENST00000445593 PIP4K2AP48426 406 aaPredicted RBP20.84■□□□□ 0.93
LAPTM4B-201ENST00000445593 UBTFL1P0CB47 393 aaPredicted RBP20.83■□□□□ 0.93
LAPTM4B-201ENST00000445593 IL1RAPL2Q9NP60 686 aa20.83■□□□□ 0.93
LAPTM4B-201ENST00000445593 ERBB3P21860 1342 aa20.83■□□□□ 0.92
LAPTM4B-201ENST00000445593 TTC22Q5TAA0 569 aa20.83■□□□□ 0.92
LAPTM4B-201ENST00000445593 USP44Q9H0E7 712 aa20.82■□□□□ 0.92
LAPTM4B-201ENST00000445593 CDC45O75419 566 aa20.82■□□□□ 0.92
LAPTM4B-201ENST00000445593 CEMIPQ8WUJ3 1361 aa20.82■□□□□ 0.92
LAPTM4B-201ENST00000445593 HSCBQ8IWL3 235 aa20.81■□□□□ 0.92
LAPTM4B-201ENST00000445593 NBPF7P0C2Y1 421 aaPredicted RBP20.81■□□□□ 0.92
LAPTM4B-201ENST00000445593 SDSP20132 328 aa20.81■□□□□ 0.92
LAPTM4B-201ENST00000445593 AMOTQ4VCS5 1084 aa20.81■□□□□ 0.92
LAPTM4B-201ENST00000445593 GNAI3P08754 354 aa20.8■□□□□ 0.92
LAPTM4B-201ENST00000445593 SRCIN1Q9C0H9 1055 aa20.8■□□□□ 0.92
LAPTM4B-201ENST00000445593 A0A0U1RQG5 324 aaPredicted RBP20.79■□□□□ 0.92
LAPTM4B-201ENST00000445593 MYL6BP14649 208 aa20.79■□□□□ 0.92
LAPTM4B-201ENST00000445593 CD2BP2O95400 341 aaKnown RBP20.78■□□□□ 0.92
LAPTM4B-201ENST00000445593 CADPS2Q86UW7 1296 aa20.78■□□□□ 0.92
LAPTM4B-201ENST00000445593 NFATC2IPQ8NCF5 419 aa20.78■□□□□ 0.92
LAPTM4B-201ENST00000445593 MST1RQ04912 1400 aa20.77■□□□□ 0.92
LAPTM4B-201ENST00000445593 DNAAF4Q8WXU2 420 aa20.77■□□□□ 0.92
LAPTM4B-201ENST00000445593 MAP4K4O95819 1239 aaPredicted RBP20.77■□□□□ 0.91
LAPTM4B-201ENST00000445593 HSP90AA1P07900 732 aaKnown RBP20.77■□□□□ 0.91
LAPTM4B-201ENST00000445593 CWF19L2Q2TBE0 894 aaKnown RBP20.77■□□□□ 0.91
LAPTM4B-201ENST00000445593 RILPL2Q969X0 211 aa20.77■□□□□ 0.91
LAPTM4B-201ENST00000445593 USP35Q9P2H5 1018 aa20.77■□□□□ 0.91
LAPTM4B-201ENST00000445593 PPP1R42Q7Z4L9 355 aa20.76■□□□□ 0.91
LAPTM4B-201ENST00000445593 NUTM1Q86Y26 1132 aa20.76■□□□□ 0.91
LAPTM4B-201ENST00000445593 ARXQ96QS3 562 aa20.76■□□□□ 0.91
LAPTM4B-201ENST00000445593 TRIM6-TRIM34B2RNG4 842 aa20.76■□□□□ 0.91
LAPTM4B-201ENST00000445593 SURF6O75683 361 aaKnown RBP20.76■□□□□ 0.91
LAPTM4B-201ENST00000445593 HSP90AB1P08238 724 aaKnown RBP20.76■□□□□ 0.91
LAPTM4B-201ENST00000445593 TATP17735 454 aaPredicted RBP20.76■□□□□ 0.91
LAPTM4B-201ENST00000445593 LRRCC1Q9C099 1032 aa20.76■□□□□ 0.91
LAPTM4B-201ENST00000445593 NPHP3Q7Z494 1330 aa20.75■□□□□ 0.91
LAPTM4B-201ENST00000445593 SRGAP3O43295 1099 aa20.75■□□□□ 0.91
LAPTM4B-201ENST00000445593 MAP3K2Q9Y2U5 619 aa20.75■□□□□ 0.91
LAPTM4B-201ENST00000445593 GIGYF1O75420 1035 aaPredicted RBP20.75■□□□□ 0.91
LAPTM4B-201ENST00000445593 LRRC37A3O60309 1634 aa20.75■□□□□ 0.91
LAPTM4B-201ENST00000445593 ZNF335Q9H4Z2 1342 aaPredicted RBP20.74■□□□□ 0.91
LAPTM4B-201ENST00000445593 PDE1AP54750 535 aa20.74■□□□□ 0.91
LAPTM4B-201ENST00000445593 ATP8B2P98198 1209 aa20.74■□□□□ 0.91
LAPTM4B-201ENST00000445593 RGPD5Q99666 1765 aa20.74■□□□□ 0.91
LAPTM4B-201ENST00000445593 RBM25P49756 843 aaKnown RBP20.73■□□□□ 0.91
LAPTM4B-201ENST00000445593 ANTXR1Q9H6X2 564 aa20.73■□□□□ 0.91
LAPTM4B-201ENST00000445593 JARID2Q92833 1246 aaPredicted RBP20.73■□□□□ 0.91
LAPTM4B-201ENST00000445593 BABAM1Q9NWV8 329 aa20.73■□□□□ 0.91
LAPTM4B-201ENST00000445593 VSIG10Q8N0Z9 540 aa20.73■□□□□ 0.91
LAPTM4B-201ENST00000445593 KIF2CQ99661 725 aa20.73■□□□□ 0.91
LAPTM4B-201ENST00000445593 C9orf78Q9NZ63 289 aaPredicted RBP20.73■□□□□ 0.91
LAPTM4B-201ENST00000445593 OS9Q13438 667 aaPredicted RBP20.72■□□□□ 0.91
LAPTM4B-201ENST00000445593 PRDM11Q9NQV5 511 aa20.72■□□□□ 0.91
LAPTM4B-201ENST00000445593 DBF4Q9UBU7 674 aaPredicted RBP20.72■□□□□ 0.91
LAPTM4B-201ENST00000445593 STRN4Q9NRL3 753 aa20.72■□□□□ 0.91
LAPTM4B-201ENST00000445593 FAM208AQ9UK61 1670 aaKnown RBP20.72■□□□□ 0.91
LAPTM4B-201ENST00000445593 MED1Q15648 1581 aaPredicted RBP20.71■□□□□ 0.91
LAPTM4B-201ENST00000445593 USP54Q70EL1 1684 aa20.71■□□□□ 0.91
LAPTM4B-201ENST00000445593 BEND3Q5T5X7 828 aa20.71■□□□□ 0.91
LAPTM4B-201ENST00000445593 BRINP3Q76B58 766 aa20.71■□□□□ 0.91
LAPTM4B-201ENST00000445593 SLIT3O75094 1523 aa20.71■□□□□ 0.91
LAPTM4B-201ENST00000445593 MX1P20591 662 aa20.7■□□□□ 0.9
LAPTM4B-201ENST00000445593 STRCP1A6NGW2 1772 aa20.7■□□□□ 0.9
LAPTM4B-201ENST00000445593 ADCY9O60503 1353 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 997.6 ms