RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 PAPPAQ13219 1627 aa14.33□□□□□ -0.12
HDAC6-211ENST00000443563 C5P01031 1676 aa14.33□□□□□ -0.12
HDAC6-211ENST00000443563 SIPA1L3O60292 1781 aaPredicted RBP14.32□□□□□ -0.12
HDAC6-211ENST00000443563 TAF1LQ8IZX4 1826 aa14.32□□□□□ -0.12
HDAC6-211ENST00000443563 NFE2L2Q16236 605 aa14.32□□□□□ -0.12
HDAC6-211ENST00000443563 ATG3Q9NT62 314 aa14.32□□□□□ -0.12
HDAC6-211ENST00000443563 ASAP1Q9ULH1 1129 aa14.32□□□□□ -0.12
HDAC6-211ENST00000443563 RUNDC1Q96C34 613 aa14.31□□□□□ -0.12
HDAC6-211ENST00000443563 LRRC4BQ9NT99 713 aa14.31□□□□□ -0.12
HDAC6-211ENST00000443563 ADAMTS8Q9UP79 889 aa14.31□□□□□ -0.12
HDAC6-211ENST00000443563 CEMIPQ8WUJ3 1361 aa14.31□□□□□ -0.12
HDAC6-211ENST00000443563 QSER1Q2KHR3 1735 aa14.3□□□□□ -0.12
HDAC6-211ENST00000443563 LOC102724428A0A0B4J2F2 783 aa14.3□□□□□ -0.12
HDAC6-211ENST00000443563 SIK1P57059 783 aa14.3□□□□□ -0.12
HDAC6-211ENST00000443563 R3HDM1Q15032 1099 aaKnown RBP14.3□□□□□ -0.12
HDAC6-211ENST00000443563 SLC15A2Q16348 729 aa14.3□□□□□ -0.12
HDAC6-211ENST00000443563 IL17REQ8NFR9 667 aa14.3□□□□□ -0.12
HDAC6-211ENST00000443563 MRS2Q9HD23 443 aa14.3□□□□□ -0.12
HDAC6-211ENST00000443563 LMOD3Q0VAK6 560 aa14.29□□□□□ -0.12
HDAC6-211ENST00000443563 PSDA5PKW4 1024 aaPredicted RBP14.28□□□□□ -0.12
HDAC6-211ENST00000443563 ATP6V1AP38606 617 aa14.28□□□□□ -0.12
HDAC6-211ENST00000443563 RBM42Q9BTD8 480 aaKnown RBP14.28□□□□□ -0.12
HDAC6-211ENST00000443563 ANO8Q9HCE9 1232 aaPredicted RBP14.28□□□□□ -0.12
HDAC6-211ENST00000443563 UBR2Q8IWV8 1755 aa14.27□□□□□ -0.12
HDAC6-211ENST00000443563 C4BP0C0L5 1744 aa14.27□□□□□ -0.12
HDAC6-211ENST00000443563 CICQ96RK0 1608 aaPredicted RBP14.27□□□□□ -0.12
HDAC6-211ENST00000443563 TMPOP42166 694 aaKnown RBP14.27□□□□□ -0.13
HDAC6-211ENST00000443563 RIPK4P57078 832 aa14.27□□□□□ -0.13
HDAC6-211ENST00000443563 MCM10Q7L590 875 aa14.27□□□□□ -0.13
HDAC6-211ENST00000443563 CCDC146Q8IYE0 955 aa14.27□□□□□ -0.13
HDAC6-211ENST00000443563 TTC5Q8N0Z6 440 aa14.27□□□□□ -0.13
HDAC6-211ENST00000443563 KCNQ4P56696 695 aa14.26□□□□□ -0.13
HDAC6-211ENST00000443563 CCDC184Q52MB2 194 aa14.26□□□□□ -0.13
HDAC6-211ENST00000443563 PNISRQ8TF01 805 aaKnown RBP14.26□□□□□ -0.13
HDAC6-211ENST00000443563 AKT1S1Q96B36 256 aa14.26□□□□□ -0.13
HDAC6-211ENST00000443563 COL5A3P25940 1745 aaPredicted RBP14.26□□□□□ -0.13
HDAC6-211ENST00000443563 BTBD11A6QL63 1104 aa14.25□□□□□ -0.13
HDAC6-211ENST00000443563 PTCD1O75127 700 aaKnown RBP14.25□□□□□ -0.13
HDAC6-211ENST00000443563 TAF7Q15545 349 aaPredicted RBP14.25□□□□□ -0.13
HDAC6-211ENST00000443563 AK7Q96M32 723 aa14.25□□□□□ -0.13
HDAC6-211ENST00000443563 TFCP2L1Q9NZI6 479 aa14.25□□□□□ -0.13
HDAC6-211ENST00000443563 TUBGCP6Q96RT7 1819 aa14.25□□□□□ -0.13
HDAC6-211ENST00000443563 CASZ1Q86V15 1759 aa14.24□□□□□ -0.13
HDAC6-211ENST00000443563 SLC39A6Q13433 755 aa14.24□□□□□ -0.13
HDAC6-211ENST00000443563 DCTN1Q14203 1278 aa14.24□□□□□ -0.13
HDAC6-211ENST00000443563 ZNF827Q17R98 1081 aa14.24□□□□□ -0.13
HDAC6-211ENST00000443563 ZNF790Q6PG37 636 aa14.24□□□□□ -0.13
HDAC6-211ENST00000443563 VSIG10Q8N0Z9 540 aa14.24□□□□□ -0.13
HDAC6-211ENST00000443563 FLAD1Q8NFF5 587 aa14.24□□□□□ -0.13
HDAC6-211ENST00000443563 KCPQ6ZWJ8 1503 aa14.24□□□□□ -0.13
HDAC6-211ENST00000443563 TJP1Q07157 1748 aa14.24□□□□□ -0.13
HDAC6-211ENST00000443563 DIEXFQ68CQ4 756 aaKnown RBP14.23□□□□□ -0.13
HDAC6-211ENST00000443563 UBR3Q6ZT12 1888 aa14.23□□□□□ -0.13
HDAC6-211ENST00000443563 SRCAPQ6ZRS2 3230 aa14.22□□□□□ -0.13
HDAC6-211ENST00000443563 ITPK1Q13572 414 aa14.22□□□□□ -0.13
HDAC6-211ENST00000443563 NEUROD2Q15784 382 aa14.22□□□□□ -0.13
HDAC6-211ENST00000443563 RC3H1Q5TC82 1133 aaKnown RBP14.22□□□□□ -0.13
HDAC6-211ENST00000443563 LINC00116Q8NCU8 138 aa14.22□□□□□ -0.13
HDAC6-211ENST00000443563 FMNL2Q96PY5 1086 aa14.22□□□□□ -0.13
HDAC6-211ENST00000443563 TEX13AQ9BXU3 409 aaPredicted RBP14.22□□□□□ -0.13
HDAC6-211ENST00000443563 SLC16A10Q8TF71 515 aa14.21□□□□□ -0.13
HDAC6-211ENST00000443563 SLC4A9Q96Q91 983 aa14.21□□□□□ -0.13
HDAC6-211ENST00000443563 BABAM1Q9NWV8 329 aa14.21□□□□□ -0.13
HDAC6-211ENST00000443563 RRP7AQ9Y3A4 280 aaKnown RBP14.21□□□□□ -0.13
HDAC6-211ENST00000443563 LRP5O75197 1615 aa14.21□□□□□ -0.13
HDAC6-211ENST00000443563 KDM3BQ7LBC6 1761 aa14.21□□□□□ -0.13
HDAC6-211ENST00000443563 CNTNAP4Q9C0A0 1308 aa14.2□□□□□ -0.14
HDAC6-211ENST00000443563 CCER2I3L3R5 266 aa14.2□□□□□ -0.14
HDAC6-211ENST00000443563 APAF1O14727 1248 aa14.2□□□□□ -0.14
HDAC6-211ENST00000443563 SSFA2P28290 1259 aa14.2□□□□□ -0.14
HDAC6-211ENST00000443563 CALD1Q05682 793 aaKnown RBP14.2□□□□□ -0.14
HDAC6-211ENST00000443563 HEG1Q9ULI3 1381 aa14.2□□□□□ -0.14
HDAC6-211ENST00000443563 PNPLA7Q6ZV29 1317 aa14.19□□□□□ -0.14
HDAC6-211ENST00000443563 STARD3NLO95772 234 aa14.19□□□□□ -0.14
HDAC6-211ENST00000443563 ZNF496Q96IT1 587 aaPredicted RBP14.19□□□□□ -0.14
HDAC6-211ENST00000443563 RTCBQ9Y3I0 505 aaKnown RBP14.19□□□□□ -0.14
HDAC6-211ENST00000443563 GNPATO15228 680 aa14.18□□□□□ -0.14
HDAC6-211ENST00000443563 MSH5O43196 834 aa14.18□□□□□ -0.14
HDAC6-211ENST00000443563 NCBP3Q53F19 620 aaKnown RBP14.18□□□□□ -0.14
HDAC6-211ENST00000443563 FAM9BQ8IZU0 186 aa14.18□□□□□ -0.14
HDAC6-211ENST00000443563 THUMPD2Q9BTF0 503 aaKnown RBP14.18□□□□□ -0.14
HDAC6-211ENST00000443563 MTFR1LQ9H019 292 aa14.18□□□□□ -0.14
HDAC6-211ENST00000443563 SPON1Q9HCB6 807 aa14.18□□□□□ -0.14
HDAC6-211ENST00000443563 TRIM35Q9UPQ4 493 aa14.18□□□□□ -0.14
HDAC6-211ENST00000443563 MYH14Q7Z406 1995 aaKnown RBP14.17□□□□□ -0.14
HDAC6-211ENST00000443563 RPS6KA4O75676 772 aa14.17□□□□□ -0.14
HDAC6-211ENST00000443563 ADRA2BP18089 450 aa14.17□□□□□ -0.14
HDAC6-211ENST00000443563 CRKLP46109 303 aaKnown RBP14.17□□□□□ -0.14
HDAC6-211ENST00000443563 DNAJC10Q8IXB1 793 aa14.17□□□□□ -0.14
HDAC6-211ENST00000443563 TSPYL4Q9UJ04 414 aa14.17□□□□□ -0.14
HDAC6-211ENST00000443563 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.16□□□□□ -0.14
HDAC6-211ENST00000443563 SNRPA1P09661 255 aaKnown RBP14.16□□□□□ -0.14
HDAC6-211ENST00000443563 CYP19A1P11511 503 aaPredicted RBP14.16□□□□□ -0.14
HDAC6-211ENST00000443563 TRAPPC3LQ5T215 181 aa14.16□□□□□ -0.14
HDAC6-211ENST00000443563 NGEFQ8N5V2 710 aa14.16□□□□□ -0.14
HDAC6-211ENST00000443563 CCDC87Q9NVE4 849 aa14.16□□□□□ -0.14
HDAC6-211ENST00000443563 LAMB4A4D0S4 1761 aa14.16□□□□□ -0.14
HDAC6-211ENST00000443563 KCNQ3O43525 872 aa14.15□□□□□ -0.14
HDAC6-211ENST00000443563 PHF14O94880 888 aa14.15□□□□□ -0.14
HDAC6-211ENST00000443563 ZBTB7AO95365 584 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms