RNA–Protein interactions for RNA: ENST00000443501.1

FNDC3B-206, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 3

Gene FNDC3B, Length 678 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-206ENST00000443501 SMC1BQ8NDV3 1235 aa11.69□□□□□ -0.54
FNDC3B-206ENST00000443501 USP47Q96K76 1375 aa11.68□□□□□ -0.54
FNDC3B-206ENST00000443501 TTC21AQ8NDW8 1320 aa11.68□□□□□ -0.54
FNDC3B-206ENST00000443501 KDM2BQ8NHM5 1336 aa11.68□□□□□ -0.54
FNDC3B-206ENST00000443501 ANKRD24Q8TF21 1146 aa11.67□□□□□ -0.54
FNDC3B-206ENST00000443501 TAOK2Q9UL54 1235 aa11.67□□□□□ -0.54
FNDC3B-206ENST00000443501 USP54Q70EL1 1684 aa11.67□□□□□ -0.54
FNDC3B-206ENST00000443501 KAT6BQ8WYB5 2073 aa11.67□□□□□ -0.54
FNDC3B-206ENST00000443501 PXDNLA1KZ92 1463 aa11.66□□□□□ -0.54
FNDC3B-206ENST00000443501 TGFB2P61812 414 aa11.66□□□□□ -0.54
FNDC3B-206ENST00000443501 ARHGAP27Q6ZUM4 889 aa11.66□□□□□ -0.54
FNDC3B-206ENST00000443501 C9orf131Q5VYM1 1079 aa11.65□□□□□ -0.54
FNDC3B-206ENST00000443501 KIF12Q96FN5 646 aa11.65□□□□□ -0.54
FNDC3B-206ENST00000443501 PRDM10Q9NQV6 1147 aa11.65□□□□□ -0.54
FNDC3B-206ENST00000443501 BCS1LQ9Y276 419 aa11.65□□□□□ -0.54
FNDC3B-206ENST00000443501 STK24Q9Y6E0 443 aa11.65□□□□□ -0.54
FNDC3B-206ENST00000443501 DOT1LQ8TEK3 1739 aa11.65□□□□□ -0.54
FNDC3B-206ENST00000443501 C5P01031 1676 aa11.65□□□□□ -0.55
FNDC3B-206ENST00000443501 CENPJQ9HC77 1338 aaPredicted RBP11.64□□□□□ -0.55
FNDC3B-206ENST00000443501 MAP3K13O43283 966 aa11.64□□□□□ -0.55
FNDC3B-206ENST00000443501 CD44P16070 742 aaKnown RBP11.64□□□□□ -0.55
FNDC3B-206ENST00000443501 FAM161AQ3B820 660 aa11.64□□□□□ -0.55
FNDC3B-206ENST00000443501 ZNF467Q7Z7K2 595 aaPredicted RBP11.64□□□□□ -0.55
FNDC3B-206ENST00000443501 PCGF6Q9BYE7 350 aa11.64□□□□□ -0.55
FNDC3B-206ENST00000443501 RRAGCQ9HB90 399 aa11.64□□□□□ -0.55
FNDC3B-206ENST00000443501 KCPQ6ZWJ8 1503 aa11.64□□□□□ -0.55
FNDC3B-206ENST00000443501 NSD3Q9BZ95 1437 aa11.63□□□□□ -0.55
FNDC3B-206ENST00000443501 AMIGO3Q86WK7 504 aa11.63□□□□□ -0.55
FNDC3B-206ENST00000443501 TSHZ2Q9NRE2 1034 aa11.63□□□□□ -0.55
FNDC3B-206ENST00000443501 USP31Q70CQ4 1352 aa11.63□□□□□ -0.55
FNDC3B-206ENST00000443501 GTPBP6O43824 516 aaPredicted RBP11.62□□□□□ -0.55
FNDC3B-206ENST00000443501 IFNL1Q8IU54 200 aa11.62□□□□□ -0.55
FNDC3B-206ENST00000443501 AK7Q96M32 723 aa11.62□□□□□ -0.55
FNDC3B-206ENST00000443501 KIAA1551Q9HCM1 1747 aa11.61□□□□□ -0.55
FNDC3B-206ENST00000443501 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.61□□□□□ -0.55
FNDC3B-206ENST00000443501 SSFA2P28290 1259 aa11.61□□□□□ -0.55
FNDC3B-206ENST00000443501 ZNF579Q8NAF0 562 aaKnown RBP11.61□□□□□ -0.55
FNDC3B-206ENST00000443501 ZCRB1Q8TBF4 217 aaKnown RBP11.61□□□□□ -0.55
FNDC3B-206ENST00000443501 TNRC6CQ9HCJ0 1690 aaKnown RBP11.61□□□□□ -0.55
FNDC3B-206ENST00000443501 TOGARAM1Q9Y4F4 1720 aa11.6□□□□□ -0.55
FNDC3B-206ENST00000443501 PALLDQ8WX93 1383 aa11.6□□□□□ -0.55
FNDC3B-206ENST00000443501 A0A0G2JLW4 131 aa11.6□□□□□ -0.55
FNDC3B-206ENST00000443501 FCHSD2O94868 740 aa11.6□□□□□ -0.55
FNDC3B-206ENST00000443501 PHF12Q96QT6 1004 aa11.6□□□□□ -0.55
FNDC3B-206ENST00000443501 KIF13BQ9NQT8 1826 aa11.6□□□□□ -0.55
FNDC3B-206ENST00000443501 C4BP0C0L5 1744 aa11.6□□□□□ -0.55
FNDC3B-206ENST00000443501 KIAA1210Q9ULL0 1709 aa11.6□□□□□ -0.55
FNDC3B-206ENST00000443501 TAF1LQ8IZX4 1826 aa11.59□□□□□ -0.55
FNDC3B-206ENST00000443501 C19orf67A6NJJ6 358 aa11.59□□□□□ -0.55
FNDC3B-206ENST00000443501 FOXN1O15353 648 aa11.59□□□□□ -0.55
FNDC3B-206ENST00000443501 PHF14O94880 888 aa11.59□□□□□ -0.55
FNDC3B-206ENST00000443501 VSIG10Q8N0Z9 540 aa11.59□□□□□ -0.55
FNDC3B-206ENST00000443501 PKD1L3Q7Z443 1732 aa11.59□□□□□ -0.55
FNDC3B-206ENST00000443501 KTN1Q86UP2 1357 aaKnown RBP11.58□□□□□ -0.56
FNDC3B-206ENST00000443501 MMP10P09238 476 aa11.58□□□□□ -0.56
FNDC3B-206ENST00000443501 RGS19P49795 217 aa11.58□□□□□ -0.56
FNDC3B-206ENST00000443501 MLLT1Q03111 559 aaPredicted RBP11.58□□□□□ -0.56
FNDC3B-206ENST00000443501 PDAP1Q13442 181 aaKnown RBP11.58□□□□□ -0.56
FNDC3B-206ENST00000443501 NBPF1Q3BBV0 1214 aa11.58□□□□□ -0.56
FNDC3B-206ENST00000443501 SMIM5Q71RC9 77 aa11.58□□□□□ -0.56
FNDC3B-206ENST00000443501 RNF181Q9P0P0 153 aa11.58□□□□□ -0.56
FNDC3B-206ENST00000443501 EVC2Q86UK5 1308 aa11.58□□□□□ -0.56
FNDC3B-206ENST00000443501 ZC3H4Q9UPT8 1303 aaKnown RBP11.58□□□□□ -0.56
FNDC3B-206ENST00000443501 FAM208AQ9UK61 1670 aaKnown RBP11.57□□□□□ -0.56
FNDC3B-206ENST00000443501 VEGFAP15692 232 aaPredicted RBP11.57□□□□□ -0.56
FNDC3B-206ENST00000443501 DPEP1P16444 411 aa11.57□□□□□ -0.56
FNDC3B-206ENST00000443501 CTCFP49711 727 aaPredicted RBP11.57□□□□□ -0.56
FNDC3B-206ENST00000443501 IP6K1Q92551 441 aa11.57□□□□□ -0.56
FNDC3B-206ENST00000443501 ABHD8Q96I13 439 aa11.57□□□□□ -0.56
FNDC3B-206ENST00000443501 UBR3Q6ZT12 1888 aa11.57□□□□□ -0.56
FNDC3B-206ENST00000443501 LTN1O94822 1766 aa11.56□□□□□ -0.56
FNDC3B-206ENST00000443501 PSEN1P49768 467 aa11.56□□□□□ -0.56
FNDC3B-206ENST00000443501 SMARCC1Q92922 1105 aaPredicted RBP11.56□□□□□ -0.56
FNDC3B-206ENST00000443501 DCAF5Q96JK2 942 aa11.56□□□□□ -0.56
FNDC3B-206ENST00000443501 N4BP2Q86UW6 1770 aaPredicted RBP11.56□□□□□ -0.56
FNDC3B-206ENST00000443501 KCNA3P22001 575 aa11.55□□□□□ -0.56
FNDC3B-206ENST00000443501 CGNL1Q0VF96 1302 aa11.55□□□□□ -0.56
FNDC3B-206ENST00000443501 MEGF6O75095 1541 aa11.55□□□□□ -0.56
FNDC3B-206ENST00000443501 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.54□□□□□ -0.564e-7■□□□□ 9.9
FNDC3B-206ENST00000443501 NLGN1Q8N2Q7 840 aa11.54□□□□□ -0.56
FNDC3B-206ENST00000443501 CCDC87Q9NVE4 849 aa11.54□□□□□ -0.56
FNDC3B-206ENST00000443501 PIM2Q9P1W9 311 aa11.54□□□□□ -0.56
FNDC3B-206ENST00000443501 ARFGEF1Q9Y6D6 1849 aa11.53□□□□□ -0.56
FNDC3B-206ENST00000443501 BRCA1P38398 1863 aaKnown RBP11.53□□□□□ -0.56
FNDC3B-206ENST00000443501 GLTPD2A6NH11 291 aa11.53□□□□□ -0.56
FNDC3B-206ENST00000443501 MPRIPQ6WCQ1 1025 aa11.53□□□□□ -0.56
FNDC3B-206ENST00000443501 NME9Q86XW9 330 aa11.53□□□□□ -0.56
FNDC3B-206ENST00000443501 AIDAQ96BJ3 306 aa11.53□□□□□ -0.56
FNDC3B-206ENST00000443501 LTV1Q96GA3 475 aaPredicted RBP11.53□□□□□ -0.56
FNDC3B-206ENST00000443501 MKRN1Q9UHC7 482 aaKnown RBP11.53□□□□□ -0.56
FNDC3B-206ENST00000443501 DALRD3Q5D0E6 543 aaKnown RBP11.52□□□□□ -0.57
FNDC3B-206ENST00000443501 LINC00116Q8NCU8 138 aa11.52□□□□□ -0.57
FNDC3B-206ENST00000443501 SBNO2Q9Y2G9 1366 aa11.52□□□□□ -0.57
FNDC3B-206ENST00000443501 KDM6AO15550 1401 aaPredicted RBP11.52□□□□□ -0.57
FNDC3B-206ENST00000443501 GNPATO15228 680 aa11.51□□□□□ -0.57
FNDC3B-206ENST00000443501 TMF1P82094 1093 aa11.51□□□□□ -0.57
FNDC3B-206ENST00000443501 MON2Q7Z3U7 1717 aa11.51□□□□□ -0.57
FNDC3B-206ENST00000443501 CNTNAP1P78357 1384 aa11.51□□□□□ -0.57
FNDC3B-206ENST00000443501 LBX1P52954 281 aa11.5□□□□□ -0.57
FNDC3B-206ENST00000443501 WBP1LQ9NX94 342 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms