RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 PHF14O94880 888 aa28.24■■■□□ 2.11
CDKN3-204ENST00000442975 COL23A1Q86Y22 540 aaPredicted RBP28.24■■■□□ 2.11
CDKN3-204ENST00000442975 NFATC2IPQ8NCF5 419 aa28.24■■■□□ 2.11
CDKN3-204ENST00000442975 SGIP1Q9BQI5 828 aa28.24■■■□□ 2.11
CDKN3-204ENST00000442975 NUDCQ9Y266 331 aa28.24■■■□□ 2.11
CDKN3-204ENST00000442975 C4BP0C0L5 1744 aa28.23■■■□□ 2.11
CDKN3-204ENST00000442975 POLD1P28340 1107 aa28.22■■■□□ 2.11
CDKN3-204ENST00000442975 ARXQ96QS3 562 aa28.22■■■□□ 2.11
CDKN3-204ENST00000442975 U2AF1L5P0DN76 240 aaPredicted RBP28.21■■■□□ 2.11
CDKN3-204ENST00000442975 U2AF1Q01081 240 aaKnown RBP eCLIP28.21■■■□□ 2.11
CDKN3-204ENST00000442975 PRKAR2BP31323 418 aa28.2■■■□□ 2.1
CDKN3-204ENST00000442975 DDX10Q13206 875 aaKnown RBP28.2■■■□□ 2.1
CDKN3-204ENST00000442975 MSL1Q68DK7 614 aa28.2■■■□□ 2.1
CDKN3-204ENST00000442975 FHDC1Q9C0D6 1143 aaPredicted RBP28.2■■■□□ 2.1
CDKN3-204ENST00000442975 LGR6Q9HBX8 967 aa28.2■■■□□ 2.1
CDKN3-204ENST00000442975 GNPATO15228 680 aa28.19■■■□□ 2.1
CDKN3-204ENST00000442975 RNMTO43148 476 aaKnown RBP28.19■■■□□ 2.1
CDKN3-204ENST00000442975 PTCD1O75127 700 aaKnown RBP28.19■■■□□ 2.1
CDKN3-204ENST00000442975 SMIM5Q71RC9 77 aa28.19■■■□□ 2.1
CDKN3-204ENST00000442975 AMIGO3Q86WK7 504 aa28.19■■■□□ 2.1
CDKN3-204ENST00000442975 FLAD1Q8NFF5 587 aa28.19■■■□□ 2.1
CDKN3-204ENST00000442975 GAS2L2Q8NHY3 880 aa28.19■■■□□ 2.1
CDKN3-204ENST00000442975 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.18■■■□□ 2.1
CDKN3-204ENST00000442975 KLHL34Q8N239 644 aa28.18■■■□□ 2.1
CDKN3-204ENST00000442975 SLC4A9Q96Q91 983 aa28.18■■■□□ 2.1
CDKN3-204ENST00000442975 SLC52A2Q9HAB3 445 aa28.18■■■□□ 2.1
CDKN3-204ENST00000442975 TAF1LQ8IZX4 1826 aa28.18■■■□□ 2.1
CDKN3-204ENST00000442975 MRC1P22897 1456 aa28.17■■■□□ 2.1
CDKN3-204ENST00000442975 MAP3K5Q99683 1374 aa28.17■■■□□ 2.1
CDKN3-204ENST00000442975 RSPH6AQ9H0K4 717 aa28.17■■■□□ 2.1
CDKN3-204ENST00000442975 SSFA2P28290 1259 aa28.14■■■□□ 2.1
CDKN3-204ENST00000442975 PHACTR3Q96KR7 559 aa28.13■■■□□ 2.09
CDKN3-204ENST00000442975 SCN11AQ9UI33 1791 aa28.12■■■□□ 2.09
CDKN3-204ENST00000442975 GNAT3A8MTJ3 354 aa28.12■■■□□ 2.09
CDKN3-204ENST00000442975 SYT17Q9BSW7 474 aa28.12■■■□□ 2.09
CDKN3-204ENST00000442975 DCAF8L1A6NGE4 600 aa28.11■■■□□ 2.09
CDKN3-204ENST00000442975 ZEB1P37275 1124 aaPredicted RBP28.11■■■□□ 2.09
CDKN3-204ENST00000442975 SLC39A6Q13433 755 aa28.1■■■□□ 2.09
CDKN3-204ENST00000442975 TEFQ10587 303 aa28.09■■■□□ 2.09
CDKN3-204ENST00000442975 RTCBQ9Y3I0 505 aaKnown RBP28.09■■■□□ 2.09
CDKN3-204ENST00000442975 CNTNAP4Q9C0A0 1308 aa28.09■■■□□ 2.09
CDKN3-204ENST00000442975 RALBP1Q15311 655 aa28.08■■■□□ 2.09
CDKN3-204ENST00000442975 ADAMTS7Q9UKP4 1686 aa28.07■■■□□ 2.08
CDKN3-204ENST00000442975 UBR3Q6ZT12 1888 aa28.07■■■□□ 2.08
CDKN3-204ENST00000442975 FCHSD2O94868 740 aa28.07■■■□□ 2.08
CDKN3-204ENST00000442975 IL17REQ8NFR9 667 aa28.06■■■□□ 2.08
CDKN3-204ENST00000442975 ZNF831Q5JPB2 1677 aa28.06■■■□□ 2.08
CDKN3-204ENST00000442975 CRKLP46109 303 aaKnown RBP28.04■■■□□ 2.08
CDKN3-204ENST00000442975 RC3H1Q5TC82 1133 aaKnown RBP28.04■■■□□ 2.08
CDKN3-204ENST00000442975 TTC5Q8N0Z6 440 aa28.04■■■□□ 2.08
CDKN3-204ENST00000442975 KCPQ6ZWJ8 1503 aa28.03■■■□□ 2.08
CDKN3-204ENST00000442975 TRAPPC3LQ5T215 181 aa28.03■■■□□ 2.08
CDKN3-204ENST00000442975 DNAJC10Q8IXB1 793 aa28.03■■■□□ 2.08
CDKN3-204ENST00000442975 COL5A3P25940 1745 aaPredicted RBP28.03■■■□□ 2.08
CDKN3-204ENST00000442975 COL24A1Q17RW2 1714 aa28.02■■■□□ 2.08
CDKN3-204ENST00000442975 NEFMP07197 916 aa28.01■■■□□ 2.07
CDKN3-204ENST00000442975 RTF1Q92541 710 aaKnown RBP28.01■■■□□ 2.07
CDKN3-204ENST00000442975 TJP1Q07157 1748 aa28.01■■■□□ 2.07
CDKN3-204ENST00000442975 RPS6KA4O75676 772 aa28■■■□□ 2.07
CDKN3-204ENST00000442975 ADRA2BP18089 450 aa28■■■□□ 2.07
CDKN3-204ENST00000442975 CEMIPQ8WUJ3 1361 aa27.99■■■□□ 2.07
CDKN3-204ENST00000442975 MYBBP1AQ9BQG0 1328 aaKnown RBP27.99■■■□□ 2.07
CDKN3-204ENST00000442975 RFC4P35249 363 aa27.98■■■□□ 2.07
CDKN3-204ENST00000442975 MCM10Q7L590 875 aa27.98■■■□□ 2.07
CDKN3-204ENST00000442975 NLGN2Q8NFZ4 835 aa27.98■■■□□ 2.07
CDKN3-204ENST00000442975 ARHGEF1Q92888 912 aaKnown RBP27.98■■■□□ 2.07
CDKN3-204ENST00000442975 CICQ96RK0 1608 aaPredicted RBP27.97■■■□□ 2.07
CDKN3-204ENST00000442975 CCDC87Q9NVE4 849 aa27.97■■■□□ 2.07
CDKN3-204ENST00000442975 ZNF790Q6PG37 636 aa27.96■■■□□ 2.07
CDKN3-204ENST00000442975 PELP1Q8IZL8 1130 aaKnown RBP27.96■■■□□ 2.07
CDKN3-204ENST00000442975 MAPK8IP3Q9UPT6 1336 aa27.95■■■□□ 2.07
CDKN3-204ENST00000442975 DCTN1Q14203 1278 aa27.95■■■□□ 2.06
CDKN3-204ENST00000442975 INTS5Q6P9B9 1019 aaKnown RBP27.95■■■□□ 2.06
CDKN3-204ENST00000442975 BTBD11A6QL63 1104 aa27.94■■■□□ 2.06
CDKN3-204ENST00000442975 MMP10P09238 476 aa27.94■■■□□ 2.06
CDKN3-204ENST00000442975 CYP19A1P11511 503 aaPredicted RBP27.94■■■□□ 2.06
CDKN3-204ENST00000442975 VSIG10Q8N0Z9 540 aa27.94■■■□□ 2.06
CDKN3-204ENST00000442975 ZNF496Q96IT1 587 aaPredicted RBP27.94■■■□□ 2.06
CDKN3-204ENST00000442975 VIRMAQ69YN4 1812 aaKnown RBP27.93■■■□□ 2.06
CDKN3-204ENST00000442975 SRP68Q9UHB9 627 aaKnown RBP27.92■■■□□ 2.06
CDKN3-204ENST00000442975 GYS1P13807 737 aa27.91■■■□□ 2.06
CDKN3-204ENST00000442975 GPR162Q16538 588 aa27.91■■■□□ 2.06
CDKN3-204ENST00000442975 ZBTB1Q9Y2K1 713 aa27.91■■■□□ 2.06
CDKN3-204ENST00000442975 HEG1Q9ULI3 1381 aa27.9■■■□□ 2.06
CDKN3-204ENST00000442975 NLGN1Q8N2Q7 840 aa27.9■■■□□ 2.06
CDKN3-204ENST00000442975 FMNL2Q96PY5 1086 aa27.9■■■□□ 2.06
CDKN3-204ENST00000442975 PLEKHF1Q96S99 279 aa27.9■■■□□ 2.06
CDKN3-204ENST00000442975 PNNQ9H307 717 aaKnown RBP27.9■■■□□ 2.06
CDKN3-204ENST00000442975 CD2APQ9Y5K6 639 aa27.9■■■□□ 2.06
CDKN3-204ENST00000442975 UBR2Q8IWV8 1755 aa27.9■■■□□ 2.06
CDKN3-204ENST00000442975 SOS1Q07889 1333 aaPredicted RBP27.9■■■□□ 2.06
CDKN3-204ENST00000442975 UTRNP46939 3433 aa27.89■■■□□ 2.06
CDKN3-204ENST00000442975 KCNQ3O43525 872 aa27.89■■■□□ 2.06
CDKN3-204ENST00000442975 HTATSF1O43719 755 aaKnown RBP27.89■■■□□ 2.06
CDKN3-204ENST00000442975 STARD3NLO95772 234 aa27.89■■■□□ 2.06
CDKN3-204ENST00000442975 USP42Q9H9J4 1324 aaKnown RBP27.89■■■□□ 2.05
CDKN3-204ENST00000442975 MYH14Q7Z406 1995 aaKnown RBP27.88■■■□□ 2.05
CDKN3-204ENST00000442975 NFE2L2Q16236 605 aa27.88■■■□□ 2.05
CDKN3-204ENST00000442975 SIPA1L3O60292 1781 aaPredicted RBP27.88■■■□□ 2.05
CDKN3-204ENST00000442975 COL15A1P39059 1388 aa27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms