RNA–Protein interactions for RNA: ENST00000442218.2

SLC48A1-201, Transcript of solute carrier family 48 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC48A1, Length 3,010 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-201ENST00000442218 INTS3Q68E01 1043 aaKnown RBP16.13■□□□□ 0.17
SLC48A1-201ENST00000442218 LMOD3Q0VAK6 560 aa16.13■□□□□ 0.17
SLC48A1-201ENST00000442218 EYA1Q99502 592 aa16.13■□□□□ 0.17
SLC48A1-201ENST00000442218 NRKQ7Z2Y5 1582 aa16.12■□□□□ 0.17
SLC48A1-201ENST00000442218 PALD1Q9ULE6 856 aa16.12■□□□□ 0.17
SLC48A1-201ENST00000442218 CIZ1Q9ULV3 898 aaPredicted RBP16.12■□□□□ 0.17
SLC48A1-201ENST00000442218 PRIM1P49642 420 aaKnown RBP16.11■□□□□ 0.17
SLC48A1-201ENST00000442218 RABEP1Q15276 862 aa16.11■□□□□ 0.17
SLC48A1-201ENST00000442218 ANO2Q9NQ90 1003 aa16.11■□□□□ 0.17
SLC48A1-201ENST00000442218 FKBP5Q13451 457 aaPredicted RBP16.11■□□□□ 0.17
SLC48A1-201ENST00000442218 CHMP4BQ9H444 224 aaKnown RBP16.11■□□□□ 0.17
SLC48A1-201ENST00000442218 PNMA6EA0A0J9YXQ4 647 aa16.11■□□□□ 0.17
SLC48A1-201ENST00000442218 RBSNQ9H1K0 784 aa16.11■□□□□ 0.17
SLC48A1-201ENST00000442218 SSH2Q76I76 1423 aa16.1■□□□□ 0.17
SLC48A1-201ENST00000442218 RTL1A6NKG5 1358 aa16.1■□□□□ 0.17
SLC48A1-201ENST00000442218 SYCE3A1L190 88 aa16.1■□□□□ 0.17
SLC48A1-201ENST00000442218 ANXA1P04083 346 aa16.1■□□□□ 0.17
SLC48A1-201ENST00000442218 BRPF1P55201 1214 aaPredicted RBP16.1■□□□□ 0.17
SLC48A1-201ENST00000442218 ZSCAN23Q3MJ62 389 aa16.1■□□□□ 0.17
SLC48A1-201ENST00000442218 RTF1Q92541 710 aaKnown RBP16.1■□□□□ 0.17
SLC48A1-201ENST00000442218 ZDHHC9Q9Y397 364 aa16.1■□□□□ 0.17
SLC48A1-201ENST00000442218 NALCNQ8IZF0 1738 aa16.1■□□□□ 0.17
SLC48A1-201ENST00000442218 AATKQ6ZMQ8 1374 aa16.1■□□□□ 0.17
SLC48A1-201ENST00000442218 UNC5CLQ8IV45 518 aa16.09■□□□□ 0.17
SLC48A1-201ENST00000442218 GPT2Q8TD30 523 aa16.09■□□□□ 0.17
SLC48A1-201ENST00000442218 CHL1O00533 1208 aa16.09■□□□□ 0.17
SLC48A1-201ENST00000442218 NUTM1Q86Y26 1132 aa16.09■□□□□ 0.17
SLC48A1-201ENST00000442218 DDX54Q8TDD1 881 aaKnown RBP16.09■□□□□ 0.17
SLC48A1-201ENST00000442218 LMBRD1Q9NUN5 540 aa16.09■□□□□ 0.17
SLC48A1-201ENST00000442218 OVOS2A0A0J9YW53 1432 aa16.08■□□□□ 0.17
SLC48A1-201ENST00000442218 OVOS2Q6IE36 1432 aa16.08■□□□□ 0.17
SLC48A1-201ENST00000442218 RBM10P98175 930 aaKnown RBP16.08■□□□□ 0.16
SLC48A1-201ENST00000442218 SKOR2Q2VWA4 1001 aaPredicted RBP16.08■□□□□ 0.16
SLC48A1-201ENST00000442218 CASC1Q6TDU7 716 aa16.08■□□□□ 0.16
SLC48A1-201ENST00000442218 IL25Q9H293 177 aa16.08■□□□□ 0.16
SLC48A1-201ENST00000442218 FMN2Q9NZ56 1722 aa16.08■□□□□ 0.16
SLC48A1-201ENST00000442218 CDK12Q9NYV4 1490 aaPredicted RBP16.08■□□□□ 0.16
SLC48A1-201ENST00000442218 DLG5Q8TDM6 1919 aa16.08■□□□□ 0.16
SLC48A1-201ENST00000442218 ATP10DQ9P241 1426 aa16.08■□□□□ 0.16
SLC48A1-201ENST00000442218 ST18O60284 1047 aa16.08■□□□□ 0.16
SLC48A1-201ENST00000442218 PDE1AP54750 535 aa16.08■□□□□ 0.16
SLC48A1-201ENST00000442218 LMOD2Q6P5Q4 547 aa16.08■□□□□ 0.16
SLC48A1-201ENST00000442218 EIF2S2P20042 333 aaKnown RBP16.07■□□□□ 0.16
SLC48A1-201ENST00000442218 HSPA2P54652 639 aa16.07■□□□□ 0.16
SLC48A1-201ENST00000442218 ANP32BQ92688 251 aaKnown RBP16.07■□□□□ 0.16
SLC48A1-201ENST00000442218 KLHL40Q2TBA0 621 aa16.07■□□□□ 0.16
SLC48A1-201ENST00000442218 ABTB2Q8N961 1025 aa16.06■□□□□ 0.16
SLC48A1-201ENST00000442218 ANKARQ7Z5J8 1434 aa16.06■□□□□ 0.16
SLC48A1-201ENST00000442218 RPAP2Q8IXW5 612 aaPredicted RBP16.06■□□□□ 0.16
SLC48A1-201ENST00000442218 ERC2O15083 957 aa16.05■□□□□ 0.16
SLC48A1-201ENST00000442218 TMEM63CQ9P1W3 806 aa16.05■□□□□ 0.16
SLC48A1-201ENST00000442218 LRRFIP2Q9Y608 721 aaKnown RBP16.05■□□□□ 0.16
SLC48A1-201ENST00000442218 RGS12O14924 1447 aa16.05■□□□□ 0.16
SLC48A1-201ENST00000442218 HSP90AA2PQ14568 343 aaPredicted RBP16.05■□□□□ 0.16
SLC48A1-201ENST00000442218 TMX3Q96JJ7 454 aa16.05■□□□□ 0.16
SLC48A1-201ENST00000442218 CPA1P15085 419 aa16.04■□□□□ 0.16
SLC48A1-201ENST00000442218 KIAA1211Q6ZU35 1233 aa16.04■□□□□ 0.16
SLC48A1-201ENST00000442218 TTC21AQ8NDW8 1320 aa16.04■□□□□ 0.16
SLC48A1-201ENST00000442218 PHF8Q9UPP1 1060 aa16.04■□□□□ 0.16
SLC48A1-201ENST00000442218 ADGRL3Q9HAR2 1447 aa16.04■□□□□ 0.16
SLC48A1-201ENST00000442218 UBE2Q2Q8WVN8 375 aa16.03■□□□□ 0.16
SLC48A1-201ENST00000442218 LRRC59Q96AG4 307 aaKnown RBP16.03■□□□□ 0.16
SLC48A1-201ENST00000442218 PHAXQ9H814 394 aaKnown RBP16.03■□□□□ 0.16
SLC48A1-201ENST00000442218 KCNQ3O43525 872 aa16.03■□□□□ 0.16
SLC48A1-201ENST00000442218 ESCO1Q5FWF5 840 aa16.03■□□□□ 0.16
SLC48A1-201ENST00000442218 STK31Q9BXU1 1019 aa16.03■□□□□ 0.16
SLC48A1-201ENST00000442218 REC8O95072 547 aa16.03■□□□□ 0.16
SLC48A1-201ENST00000442218 MSNP26038 577 aaKnown RBP16.03■□□□□ 0.16
SLC48A1-201ENST00000442218 NUCB2P80303 420 aa16.03■□□□□ 0.16
SLC48A1-201ENST00000442218 PROSER2Q86WR7 435 aaPredicted RBP16.03■□□□□ 0.16
SLC48A1-201ENST00000442218 VSIG10Q8N0Z9 540 aa16.03■□□□□ 0.16
SLC48A1-201ENST00000442218 USP31Q70CQ4 1352 aa16.02■□□□□ 0.16
SLC48A1-201ENST00000442218 IL17REQ8NFR9 667 aa16.02■□□□□ 0.16
SLC48A1-201ENST00000442218 R3HCC1Q9Y3T6 440 aaKnown RBP16.02■□□□□ 0.16
SLC48A1-201ENST00000442218 PIK3C2AO00443 1686 aa16.02■□□□□ 0.15
SLC48A1-201ENST00000442218 PEAK1Q9H792 1746 aa16.02■□□□□ 0.15
SLC48A1-201ENST00000442218 KDM4FA0A1W2PPD8 638 aa16.01■□□□□ 0.15
SLC48A1-201ENST00000442218 HMMRO75330 724 aa16.01■□□□□ 0.15
SLC48A1-201ENST00000442218 GNAI2P04899 355 aa16.01■□□□□ 0.15
SLC48A1-201ENST00000442218 FLIIQ13045 1269 aa16.01■□□□□ 0.15
SLC48A1-201ENST00000442218 ORAI2Q96SN7 254 aa16.01■□□□□ 0.15
SLC48A1-201ENST00000442218 GADD45BO75293 160 aaPredicted RBP16.01■□□□□ 0.15
SLC48A1-201ENST00000442218 LGR6Q9HBX8 967 aa16.01■□□□□ 0.15
SLC48A1-201ENST00000442218 MX1P20591 662 aa16■□□□□ 0.15
SLC48A1-201ENST00000442218 PLCB2Q00722 1185 aa16■□□□□ 0.15
SLC48A1-201ENST00000442218 CCDC173Q0VFZ6 552 aa16■□□□□ 0.15
SLC48A1-201ENST00000442218 LRRCC1Q9C099 1032 aa16■□□□□ 0.15
SLC48A1-201ENST00000442218 CYP2E1P05181 493 aaPredicted RBP15.99■□□□□ 0.15
SLC48A1-201ENST00000442218 ZNF830Q96NB3 372 aaPredicted RBP15.99■□□□□ 0.15
SLC48A1-201ENST00000442218 ESYT1Q9BSJ8 1104 aa15.99■□□□□ 0.15
SLC48A1-201ENST00000442218 CRB1P82279 1406 aa15.99■□□□□ 0.15
SLC48A1-201ENST00000442218 HOXC9P31274 260 aa15.98■□□□□ 0.15
SLC48A1-201ENST00000442218 JARID2Q92833 1246 aaPredicted RBP15.98■□□□□ 0.15
SLC48A1-201ENST00000442218 SURF6O75683 361 aaKnown RBP15.98■□□□□ 0.15
SLC48A1-201ENST00000442218 SPG7Q9UQ90 795 aa15.98■□□□□ 0.15
SLC48A1-201ENST00000442218 ZSCAN30Q86W11 494 aa15.97■□□□□ 0.15
SLC48A1-201ENST00000442218 PRAMEF22A3QJZ6 481 aa15.97■□□□□ 0.15
SLC48A1-201ENST00000442218 PSME1Q06323 249 aa15.97■□□□□ 0.15
SLC48A1-201ENST00000442218 CHMP3Q9Y3E7 222 aa15.97■□□□□ 0.15
SLC48A1-201ENST00000442218 NWD1Q149M9 1564 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms