RNA–Protein interactions for RNA: ENST00000441708.1

CTNNB1-208, Transcript of catenin beta 1, humanhuman

TSL 4

Gene CTNNB1, Length 608 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-208ENST00000441708 PXDNLA1KZ92 1463 aa12.88□□□□□ -0.35
CTNNB1-208ENST00000441708 KIF24Q5T7B8 1368 aa12.86□□□□□ -0.35
CTNNB1-208ENST00000441708 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.86□□□□□ -0.35
CTNNB1-208ENST00000441708 LINC00116Q8NCU8 138 aa12.86□□□□□ -0.35
CTNNB1-208ENST00000441708 PIGBQ92521 554 aa12.86□□□□□ -0.35
CTNNB1-208ENST00000441708 EMILIN1Q9Y6C2 1016 aa12.85□□□□□ -0.35
CTNNB1-208ENST00000441708 KIF3CO14782 793 aa12.84□□□□□ -0.35
CTNNB1-208ENST00000441708 SSFA2P28290 1259 aa12.84□□□□□ -0.35
CTNNB1-208ENST00000441708 SMARCC1Q92922 1105 aaPredicted RBP12.84□□□□□ -0.35
CTNNB1-208ENST00000441708 NRXN2Q9P2S2 1712 aa12.84□□□□□ -0.35
CTNNB1-208ENST00000441708 ANKRD31Q8N7Z5 1873 aa12.84□□□□□ -0.35
CTNNB1-208ENST00000441708 C10orf71Q711Q0 1435 aa12.83□□□□□ -0.36
CTNNB1-208ENST00000441708 LOC102724428A0A0B4J2F2 783 aa12.83□□□□□ -0.36
CTNNB1-208ENST00000441708 SIK1P57059 783 aa12.83□□□□□ -0.36
CTNNB1-208ENST00000441708 TMF1P82094 1093 aa12.83□□□□□ -0.36
CTNNB1-208ENST00000441708 ITPK1Q13572 414 aa12.83□□□□□ -0.36
CTNNB1-208ENST00000441708 CDCA8Q53HL2 280 aa12.83□□□□□ -0.36
CTNNB1-208ENST00000441708 KDRP35968 1356 aa12.82□□□□□ -0.36
CTNNB1-208ENST00000441708 EIF4G2P78344 907 aaKnown RBP eCLIP12.82□□□□□ -0.36
CTNNB1-208ENST00000441708 NKX1-1Q15270 411 aaPredicted RBP12.82□□□□□ -0.36
CTNNB1-208ENST00000441708 ASAP1Q9ULH1 1129 aa12.82□□□□□ -0.36
CTNNB1-208ENST00000441708 UBR2Q8IWV8 1755 aa12.81□□□□□ -0.36
CTNNB1-208ENST00000441708 GNPATO15228 680 aa12.81□□□□□ -0.36
CTNNB1-208ENST00000441708 PCNTO95613 3336 aa12.8□□□□□ -0.36
CTNNB1-208ENST00000441708 HMGB2P26583 209 aaKnown RBP12.8□□□□□ -0.36
CTNNB1-208ENST00000441708 CARD14Q9BXL6 1004 aa12.8□□□□□ -0.36
CTNNB1-208ENST00000441708 TMOD3Q9NYL9 352 aa12.8□□□□□ -0.36
CTNNB1-208ENST00000441708 FER1L6Q2WGJ9 1857 aa12.8□□□□□ -0.36
CTNNB1-208ENST00000441708 ARFGEF2Q9Y6D5 1785 aa12.79□□□□□ -0.36
CTNNB1-208ENST00000441708 MMP10P09238 476 aa12.79□□□□□ -0.36
CTNNB1-208ENST00000441708 ATP6V1AP38606 617 aa12.79□□□□□ -0.36
CTNNB1-208ENST00000441708 EYA1Q99502 592 aa12.79□□□□□ -0.36
CTNNB1-208ENST00000441708 SPG7Q9UQ90 795 aa12.79□□□□□ -0.36
CTNNB1-208ENST00000441708 COL11A2P13942 1736 aaPredicted RBP12.79□□□□□ -0.36
CTNNB1-208ENST00000441708 SIPA1L3O60292 1781 aaPredicted RBP12.79□□□□□ -0.36
CTNNB1-208ENST00000441708 PPM1GO15355 546 aaPredicted RBP12.78□□□□□ -0.36
CTNNB1-208ENST00000441708 PHKG2P15735 406 aa12.78□□□□□ -0.36
CTNNB1-208ENST00000441708 ATG3Q9NT62 314 aa12.78□□□□□ -0.36
CTNNB1-208ENST00000441708 SLC4A9Q96Q91 983 aa12.77□□□□□ -0.37
CTNNB1-208ENST00000441708 BCS1LQ9Y276 419 aa12.77□□□□□ -0.37
CTNNB1-208ENST00000441708 WASHC2AQ641Q2 1341 aa12.77□□□□□ -0.37
CTNNB1-208ENST00000441708 KDM6AO15550 1401 aaPredicted RBP12.77□□□□□ -0.37
CTNNB1-208ENST00000441708 KCPQ6ZWJ8 1503 aa12.77□□□□□ -0.37
CTNNB1-208ENST00000441708 A0A0G2JLW4 131 aa12.76□□□□□ -0.37
CTNNB1-208ENST00000441708 IFNL2Q8IZJ0 200 aa12.76□□□□□ -0.37
CTNNB1-208ENST00000441708 NMRK2Q9NPI5 230 aa12.76□□□□□ -0.37
CTNNB1-208ENST00000441708 HSPA5P11021 654 aaKnown RBP12.75□□□□□ -0.37
CTNNB1-208ENST00000441708 SCN7AQ01118 1682 aa12.74□□□□□ -0.37
CTNNB1-208ENST00000441708 DPEP1P16444 411 aa12.74□□□□□ -0.37
CTNNB1-208ENST00000441708 APLP1P51693 650 aa12.74□□□□□ -0.37
CTNNB1-208ENST00000441708 DNAJC5GQ8N7S2 189 aa12.74□□□□□ -0.37
CTNNB1-208ENST00000441708 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.74□□□□□ -0.371e-7■■□□□ 12.1
CTNNB1-208ENST00000441708 BCORQ6W2J9 1755 aa12.74□□□□□ -0.37
CTNNB1-208ENST00000441708 TOMM70O94826 608 aa12.73□□□□□ -0.37
CTNNB1-208ENST00000441708 GYS1P13807 737 aa12.73□□□□□ -0.37
CTNNB1-208ENST00000441708 TGFB2P61812 414 aa12.73□□□□□ -0.37
CTNNB1-208ENST00000441708 EIF4A2Q14240 407 aaKnown RBP12.73□□□□□ -0.37
CTNNB1-208ENST00000441708 ARHGAP27Q6ZUM4 889 aa12.73□□□□□ -0.37
CTNNB1-208ENST00000441708 ARHGEF1Q92888 912 aaKnown RBP12.73□□□□□ -0.37
CTNNB1-208ENST00000441708 RBM42Q9BTD8 480 aaKnown RBP12.73□□□□□ -0.37
CTNNB1-208ENST00000441708 POLKQ9UBT6 870 aa12.73□□□□□ -0.37
CTNNB1-208ENST00000441708 RTCBQ9Y3I0 505 aaKnown RBP12.73□□□□□ -0.37
CTNNB1-208ENST00000441708 CNTNAP4Q9C0A0 1308 aa12.72□□□□□ -0.37
CTNNB1-208ENST00000441708 FCHSD2O94868 740 aa12.72□□□□□ -0.37
CTNNB1-208ENST00000441708 HTRA3P83110 453 aa12.72□□□□□ -0.37
CTNNB1-208ENST00000441708 TRAPPC3LQ5T215 181 aa12.72□□□□□ -0.37
CTNNB1-208ENST00000441708 PLEKHG2Q9H7P9 1386 aa12.71□□□□□ -0.37
CTNNB1-208ENST00000441708 KCNA3P22001 575 aa12.71□□□□□ -0.37
CTNNB1-208ENST00000441708 ZEB1P37275 1124 aaPredicted RBP12.71□□□□□ -0.37
CTNNB1-208ENST00000441708 NLGN1Q8N2Q7 840 aa12.71□□□□□ -0.37
CTNNB1-208ENST00000441708 POLR3GLQ9BT43 218 aa12.71□□□□□ -0.37
CTNNB1-208ENST00000441708 CCDC87Q9NVE4 849 aa12.71□□□□□ -0.37
CTNNB1-208ENST00000441708 SLX4Q8IY92 1834 aa12.7□□□□□ -0.38
CTNNB1-208ENST00000441708 RPS6KA4O75676 772 aa12.69□□□□□ -0.38
CTNNB1-208ENST00000441708 ADRA2BP18089 450 aa12.69□□□□□ -0.38
CTNNB1-208ENST00000441708 RFC4P35249 363 aa12.69□□□□□ -0.38
CTNNB1-208ENST00000441708 TNNT2P45379 298 aaPredicted RBP12.69□□□□□ -0.38
CTNNB1-208ENST00000441708 RC3H1Q5TC82 1133 aaKnown RBP12.69□□□□□ -0.38
CTNNB1-208ENST00000441708 C9orf131Q5VYM1 1079 aa12.69□□□□□ -0.38
CTNNB1-208ENST00000441708 SRP68Q9UHB9 627 aaKnown RBP12.69□□□□□ -0.38
CTNNB1-208ENST00000441708 PARP3Q9Y6F1 533 aa12.69□□□□□ -0.38
CTNNB1-208ENST00000441708 MRC1P22897 1456 aa12.68□□□□□ -0.38
CTNNB1-208ENST00000441708 ERVV-2B6SEH9 535 aa12.68□□□□□ -0.38
CTNNB1-208ENST00000441708 RBM46Q8TBY0 533 aaKnown RBP12.68□□□□□ -0.38
CTNNB1-208ENST00000441708 DDR1Q08345 913 aa12.67□□□□□ -0.38
CTNNB1-208ENST00000441708 DCAF5Q96JK2 942 aa12.67□□□□□ -0.38
CTNNB1-208ENST00000441708 SCN4AP35499 1836 aa12.67□□□□□ -0.38
CTNNB1-208ENST00000441708 USP42Q9H9J4 1324 aaKnown RBP12.66□□□□□ -0.38
CTNNB1-208ENST00000441708 PTCD1O75127 700 aaKnown RBP12.66□□□□□ -0.38
CTNNB1-208ENST00000441708 CRKLP46109 303 aaKnown RBP12.66□□□□□ -0.38
CTNNB1-208ENST00000441708 FKBP8Q14318 412 aa12.66□□□□□ -0.38
CTNNB1-208ENST00000441708 ZNF530Q6P9A1 599 aaPredicted RBP12.66□□□□□ -0.38
CTNNB1-208ENST00000441708 DLG5Q8TDM6 1919 aa12.66□□□□□ -0.38
CTNNB1-208ENST00000441708 CHRNA5P30532 468 aa12.65□□□□□ -0.38
CTNNB1-208ENST00000441708 AEBP1Q8IUX7 1158 aa12.65□□□□□ -0.38
CTNNB1-208ENST00000441708 C16orf71Q8IYS4 520 aaPredicted RBP12.65□□□□□ -0.38
CTNNB1-208ENST00000441708 KLRG1Q96E93 195 aa12.65□□□□□ -0.38
CTNNB1-208ENST00000441708 RNF181Q9P0P0 153 aa12.65□□□□□ -0.38
CTNNB1-208ENST00000441708 PIM2Q9P1W9 311 aa12.65□□□□□ -0.38
CTNNB1-208ENST00000441708 HSP90AB1P08238 724 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms