RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 TSPYL6Q8N831 410 aa20.46■□□□□ 0.87
PMS1-213ENST00000441310 U2AF2P26368 475 aaKnown RBP eCLIP20.46■□□□□ 0.872e-7■■■■□ 24.4
PMS1-213ENST00000441310 ZBTB40Q9NUA8 1239 aa20.46■□□□□ 0.87
PMS1-213ENST00000441310 PDIA4P13667 645 aaKnown RBP20.45■□□□□ 0.86
PMS1-213ENST00000441310 TTC12Q9H892 705 aaPredicted RBP20.45■□□□□ 0.86
PMS1-213ENST00000441310 EIF4A2Q14240 407 aaKnown RBP20.44■□□□□ 0.86
PMS1-213ENST00000441310 ZNF771Q7L3S4 317 aaPredicted RBP20.44■□□□□ 0.86
PMS1-213ENST00000441310 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.44■□□□□ 0.86
PMS1-213ENST00000441310 TBX22Q9Y458 520 aa20.44■□□□□ 0.86
PMS1-213ENST00000441310 CDC42BPGQ6DT37 1551 aa20.43■□□□□ 0.86
PMS1-213ENST00000441310 C14orf37Q86TY3 774 aa20.43■□□□□ 0.86
PMS1-213ENST00000441310 PIBF1Q8WXW3 757 aa20.43■□□□□ 0.86
PMS1-213ENST00000441310 PLEKHG3A1L390 1219 aa20.42■□□□□ 0.86
PMS1-213ENST00000441310 GTF2F1P35269 517 aaKnown RBP eCLIP20.42■□□□□ 0.86
PMS1-213ENST00000441310 RABEP1Q15276 862 aa20.42■□□□□ 0.86
PMS1-213ENST00000441310 TSPY26PQ9H489 355 aa20.42■□□□□ 0.86
PMS1-213ENST00000441310 C1orf115Q9H7X2 142 aa20.42■□□□□ 0.86
PMS1-213ENST00000441310 ZDHHC9Q9Y397 364 aa20.42■□□□□ 0.86
PMS1-213ENST00000441310 NCBP3Q53F19 620 aaKnown RBP20.41■□□□□ 0.86
PMS1-213ENST00000441310 IL16Q14005 1332 aa20.41■□□□□ 0.86
PMS1-213ENST00000441310 PLCD3Q8N3E9 789 aa20.4■□□□□ 0.86
PMS1-213ENST00000441310 C3P01024 1663 aa20.4■□□□□ 0.86
PMS1-213ENST00000441310 MBIPQ9NS73 344 aa20.4■□□□□ 0.86
PMS1-213ENST00000441310 MAPK8IP2Q13387 824 aaPredicted RBP20.4■□□□□ 0.86
PMS1-213ENST00000441310 CDC45O75419 566 aa20.39■□□□□ 0.85
PMS1-213ENST00000441310 MCM10Q7L590 875 aa20.39■□□□□ 0.85
PMS1-213ENST00000441310 AATKQ6ZMQ8 1374 aa20.39■□□□□ 0.85
PMS1-213ENST00000441310 USP25Q9UHP3 1055 aa20.38■□□□□ 0.85
PMS1-213ENST00000441310 CDK11BP21127 795 aaKnown RBP20.38■□□□□ 0.85
PMS1-213ENST00000441310 KRT24Q2M2I5 525 aa20.38■□□□□ 0.85
PMS1-213ENST00000441310 NLRP6P59044 892 aa20.38■□□□□ 0.85
PMS1-213ENST00000441310 CT47B1P0C2W7 299 aaPredicted RBP20.37■□□□□ 0.85
PMS1-213ENST00000441310 FOXD4L6Q3SYB3 417 aaPredicted RBP20.37■□□□□ 0.85
PMS1-213ENST00000441310 FOXD4L3Q6VB84 417 aaPredicted RBP20.37■□□□□ 0.85
PMS1-213ENST00000441310 C8orf58Q8NAV2 365 aa20.37■□□□□ 0.85
PMS1-213ENST00000441310 USP6P35125 1406 aa20.37■□□□□ 0.85
PMS1-213ENST00000441310 TPRNQ4KMQ1 711 aa20.37■□□□□ 0.85
PMS1-213ENST00000441310 LTV1Q96GA3 475 aaPredicted RBP20.36■□□□□ 0.85
PMS1-213ENST00000441310 CDK12Q9NYV4 1490 aaPredicted RBP20.36■□□□□ 0.85
PMS1-213ENST00000441310 MAP3K19Q56UN5 1328 aa20.36■□□□□ 0.85
PMS1-213ENST00000441310 IPO4Q8TEX9 1081 aaKnown RBP20.36■□□□□ 0.85
PMS1-213ENST00000441310 CWC22Q9HCG8 908 aaKnown RBP20.36■□□□□ 0.85
PMS1-213ENST00000441310 VAMP4O75379 141 aa20.36■□□□□ 0.85
PMS1-213ENST00000441310 AMPHP49418 695 aa20.36■□□□□ 0.85
PMS1-213ENST00000441310 MBD3O95983 291 aa20.35■□□□□ 0.85
PMS1-213ENST00000441310 GNAI1P63096 354 aa20.35■□□□□ 0.85
PMS1-213ENST00000441310 MIS18AQ9NYP9 233 aa20.35■□□□□ 0.85
PMS1-213ENST00000441310 FOXO3O43524 673 aa20.35■□□□□ 0.85
PMS1-213ENST00000441310 KNDC1Q76NI1 1749 aa20.35■□□□□ 0.85
PMS1-213ENST00000441310 FER1L4A9Z1Z3 1794 aa20.34■□□□□ 0.85
PMS1-213ENST00000441310 RIOK3O14730 519 aaKnown RBP20.34■□□□□ 0.85
PMS1-213ENST00000441310 PLCB2Q00722 1185 aa20.34■□□□□ 0.85
PMS1-213ENST00000441310 FKBP5Q13451 457 aaPredicted RBP20.34■□□□□ 0.85
PMS1-213ENST00000441310 TWISTNBQ3B726 338 aaPredicted RBP20.34■□□□□ 0.85
PMS1-213ENST00000441310 TAF3Q5VWG9 929 aa20.34■□□□□ 0.85
PMS1-213ENST00000441310 IPO8O15397 1037 aaKnown RBP20.33■□□□□ 0.85
PMS1-213ENST00000441310 ITSN1Q15811 1721 aa20.32■□□□□ 0.84
PMS1-213ENST00000441310 ADCY5O95622 1261 aa20.32■□□□□ 0.84
PMS1-213ENST00000441310 MON2Q7Z3U7 1717 aa20.32■□□□□ 0.84
PMS1-213ENST00000441310 IFT57Q9NWB7 429 aa20.32■□□□□ 0.84
PMS1-213ENST00000441310 ST18O60284 1047 aa20.31■□□□□ 0.84
PMS1-213ENST00000441310 GSPT1P15170 499 aaKnown RBP20.31■□□□□ 0.84
PMS1-213ENST00000441310 ARHGAP23Q9P227 1491 aa20.31■□□□□ 0.84
PMS1-213ENST00000441310 CHAF1AQ13111 956 aaPredicted RBP20.31■□□□□ 0.84
PMS1-213ENST00000441310 ABTB2Q8N961 1025 aa20.31■□□□□ 0.84
PMS1-213ENST00000441310 GCC1Q96CN9 775 aa20.31■□□□□ 0.84
PMS1-213ENST00000441310 CFAP44Q96MT7 982 aa20.31■□□□□ 0.84
PMS1-213ENST00000441310 GDPD2Q9HCC8 539 aa20.31■□□□□ 0.84
PMS1-213ENST00000441310 ANKLE2Q86XL3 938 aa20.3■□□□□ 0.84
PMS1-213ENST00000441310 USP26Q9BXU7 913 aa20.3■□□□□ 0.84
PMS1-213ENST00000441310 OVOS2A0A0J9YW53 1432 aa20.29■□□□□ 0.84
PMS1-213ENST00000441310 OVOS2Q6IE36 1432 aa20.29■□□□□ 0.84
PMS1-213ENST00000441310 SLIT1O75093 1534 aa20.29■□□□□ 0.84
PMS1-213ENST00000441310 ZNF853P0CG23 659 aa20.29■□□□□ 0.84
PMS1-213ENST00000441310 KCNJ4P48050 445 aa20.29■□□□□ 0.84
PMS1-213ENST00000441310 LMOD3Q0VAK6 560 aa20.29■□□□□ 0.84
PMS1-213ENST00000441310 AKAP12Q02952 1782 aa20.29■□□□□ 0.84
PMS1-213ENST00000441310 MRPL50Q8N5N7 158 aaKnown RBP20.29■□□□□ 0.84
PMS1-213ENST00000441310 SYAP1Q96A49 352 aaPredicted RBP20.29■□□□□ 0.84
PMS1-213ENST00000441310 RGPD8O14715 1765 aaPredicted RBP20.28■□□□□ 0.84
PMS1-213ENST00000441310 DIAPH3Q9NSV4 1193 aa20.28■□□□□ 0.84
PMS1-213ENST00000441310 SPTLC3Q9NUV7 552 aa20.28■□□□□ 0.84
PMS1-213ENST00000441310 ALDH1L2Q3SY69 923 aa20.28■□□□□ 0.84
PMS1-213ENST00000441310 ANKRD7Q92527 254 aa20.28■□□□□ 0.84
PMS1-213ENST00000441310 EYA1Q99502 592 aa20.27■□□□□ 0.83
PMS1-213ENST00000441310 GADD45BO75293 160 aaPredicted RBP20.26■□□□□ 0.83
PMS1-213ENST00000441310 NOL8Q76FK4 1167 aaKnown RBP20.25■□□□□ 0.83
PMS1-213ENST00000441310 OGFRQ9NZT2 677 aa20.25■□□□□ 0.83
PMS1-213ENST00000441310 HCLS1P14317 486 aaPredicted RBP20.25■□□□□ 0.83
PMS1-213ENST00000441310 IRX5P78411 483 aaPredicted RBP20.25■□□□□ 0.83
PMS1-213ENST00000441310 MTHFSDQ2M296 383 aaKnown RBP20.25■□□□□ 0.83
PMS1-213ENST00000441310 ESCO1Q5FWF5 840 aa20.25■□□□□ 0.83
PMS1-213ENST00000441310 USHBP1Q8N6Y0 703 aa20.25■□□□□ 0.83
PMS1-213ENST00000441310 PYCARDQ9ULZ3 195 aa20.25■□□□□ 0.83
PMS1-213ENST00000441310 LMOD2Q6P5Q4 547 aa20.25■□□□□ 0.83
PMS1-213ENST00000441310 DIP2AQ14689 1571 aa20.24■□□□□ 0.83
PMS1-213ENST00000441310 TTC21AQ8NDW8 1320 aa20.24■□□□□ 0.83
PMS1-213ENST00000441310 SIRT2Q8IXJ6 389 aa20.24■□□□□ 0.83
PMS1-213ENST00000441310 FEZ1Q99689 392 aa20.24■□□□□ 0.83
PMS1-213ENST00000441310 ZBTB7BO15156 539 aaPredicted RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms