RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 SPINK5Q9NQ38 1064 aaPredicted RBP11.77□□□□□ -0.53
HDAC6-209ENST00000440653 POLKQ9UBT6 870 aa11.77□□□□□ -0.53
HDAC6-209ENST00000440653 TTC21BQ7Z4L5 1316 aa11.77□□□□□ -0.53
HDAC6-209ENST00000440653 TMPOP42166 694 aaKnown RBP11.76□□□□□ -0.53
HDAC6-209ENST00000440653 FAM161AQ3B820 660 aa11.76□□□□□ -0.53
HDAC6-209ENST00000440653 NGDNQ8NEJ9 315 aaKnown RBP11.76□□□□□ -0.53
HDAC6-209ENST00000440653 ZNF428Q96B54 188 aa11.76□□□□□ -0.53
HDAC6-209ENST00000440653 PNPLA7Q6ZV29 1317 aa11.76□□□□□ -0.53
HDAC6-209ENST00000440653 KDM2BQ8NHM5 1336 aa11.76□□□□□ -0.53
HDAC6-209ENST00000440653 BCL9O00512 1426 aa11.76□□□□□ -0.53
HDAC6-209ENST00000440653 PLIN1O60240 522 aa11.75□□□□□ -0.53
HDAC6-209ENST00000440653 NME9Q86XW9 330 aa11.75□□□□□ -0.53
HDAC6-209ENST00000440653 AKT1S1Q96B36 256 aa11.75□□□□□ -0.53
HDAC6-209ENST00000440653 RSPH6AQ9H0K4 717 aa11.75□□□□□ -0.53
HDAC6-209ENST00000440653 ACEP12821 1306 aa11.75□□□□□ -0.53
HDAC6-209ENST00000440653 CRB1P82279 1406 aa11.75□□□□□ -0.53
HDAC6-209ENST00000440653 COL5A2P05997 1499 aaPredicted RBP11.75□□□□□ -0.53
HDAC6-209ENST00000440653 NMRK2Q9NPI5 230 aa11.74□□□□□ -0.53
HDAC6-209ENST00000440653 RRP7AQ9Y3A4 280 aaKnown RBP11.74□□□□□ -0.53
HDAC6-209ENST00000440653 KIF16BQ96L93 1317 aa11.74□□□□□ -0.53
HDAC6-209ENST00000440653 RTL1A6NKG5 1358 aa11.74□□□□□ -0.53
HDAC6-209ENST00000440653 LTN1O94822 1766 aa11.74□□□□□ -0.53
HDAC6-209ENST00000440653 FLT4P35916 1363 aa11.73□□□□□ -0.53
HDAC6-209ENST00000440653 RARSP54136 660 aaKnown RBP11.73□□□□□ -0.53
HDAC6-209ENST00000440653 ACSBG1Q96GR2 724 aa11.73□□□□□ -0.53
HDAC6-209ENST00000440653 IL13P35225 146 aa11.72□□□□□ -0.53
HDAC6-209ENST00000440653 NEUROD2Q15784 382 aa11.72□□□□□ -0.53
HDAC6-209ENST00000440653 NFE2L2Q16236 605 aa11.72□□□□□ -0.53
HDAC6-209ENST00000440653 CPDO75976 1380 aa11.71□□□□□ -0.53
HDAC6-209ENST00000440653 PRKAR2BP31323 418 aa11.71□□□□□ -0.53
HDAC6-209ENST00000440653 C20orf194Q5TEA3 1177 aa11.71□□□□□ -0.53
HDAC6-209ENST00000440653 TRIM35Q9UPQ4 493 aa11.71□□□□□ -0.53
HDAC6-209ENST00000440653 EMILIN1Q9Y6C2 1016 aa11.71□□□□□ -0.53
HDAC6-209ENST00000440653 TUBGCP6Q96RT7 1819 aa11.71□□□□□ -0.54
HDAC6-209ENST00000440653 QSER1Q2KHR3 1735 aa11.7□□□□□ -0.54
HDAC6-209ENST00000440653 ZBTB7CA1YPR0 619 aa11.7□□□□□ -0.54
HDAC6-209ENST00000440653 ANP32AP39687 249 aaKnown RBP11.7□□□□□ -0.54
HDAC6-209ENST00000440653 KCNQ4P56696 695 aa11.7□□□□□ -0.54
HDAC6-209ENST00000440653 RIPK4P57078 832 aa11.7□□□□□ -0.54
HDAC6-209ENST00000440653 RBM46Q8TBY0 533 aaKnown RBP11.7□□□□□ -0.54
HDAC6-209ENST00000440653 CLUAP1Q96AJ1 413 aa11.7□□□□□ -0.54
HDAC6-209ENST00000440653 BCAR3O75815 825 aa11.69□□□□□ -0.54
HDAC6-209ENST00000440653 ALDH1L2Q3SY69 923 aa11.69□□□□□ -0.54
HDAC6-209ENST00000440653 MSL1Q68DK7 614 aa11.69□□□□□ -0.54
HDAC6-209ENST00000440653 TOM1L2Q6ZVM7 507 aa11.69□□□□□ -0.54
HDAC6-209ENST00000440653 IFT57Q9NWB7 429 aa11.69□□□□□ -0.54
HDAC6-209ENST00000440653 WNK3Q9BYP7 1800 aa11.69□□□□□ -0.54
HDAC6-209ENST00000440653 N4BP2Q86UW6 1770 aaPredicted RBP11.69□□□□□ -0.54
HDAC6-209ENST00000440653 KDRP35968 1356 aa11.68□□□□□ -0.54
HDAC6-209ENST00000440653 PPM1GO15355 546 aaPredicted RBP11.68□□□□□ -0.54
HDAC6-209ENST00000440653 GNAI1P63096 354 aa11.68□□□□□ -0.54
HDAC6-209ENST00000440653 ZKSCAN2Q63HK3 967 aa11.68□□□□□ -0.54
HDAC6-209ENST00000440653 TFCP2L1Q9NZI6 479 aa11.68□□□□□ -0.54
HDAC6-209ENST00000440653 NFAT5O94916 1531 aa11.68□□□□□ -0.54
HDAC6-209ENST00000440653 NHSQ6T4R5 1651 aa11.68□□□□□ -0.54
HDAC6-209ENST00000440653 SLIT3O75094 1523 aa11.67□□□□□ -0.54
HDAC6-209ENST00000440653 BRPF1P55201 1214 aaPredicted RBP11.67□□□□□ -0.54
HDAC6-209ENST00000440653 CD2APQ9Y5K6 639 aa11.67□□□□□ -0.54
HDAC6-209ENST00000440653 FAM208AQ9UK61 1670 aaKnown RBP11.66□□□□□ -0.54
HDAC6-209ENST00000440653 BTAF1O14981 1849 aa11.66□□□□□ -0.54
HDAC6-209ENST00000440653 EXOC5O00471 708 aa11.66□□□□□ -0.54
HDAC6-209ENST00000440653 GCP02774 474 aa11.66□□□□□ -0.54
HDAC6-209ENST00000440653 FTSJ3Q8IY81 847 aaKnown RBP11.66□□□□□ -0.54
HDAC6-209ENST00000440653 CHMP4BQ9H444 224 aaKnown RBP11.66□□□□□ -0.54
HDAC6-209ENST00000440653 SMC4Q9NTJ3 1288 aa11.66□□□□□ -0.54
HDAC6-209ENST00000440653 ABCC6O95255 1503 aa11.65□□□□□ -0.54
HDAC6-209ENST00000440653 USP19O94966 1318 aa11.65□□□□□ -0.54
HDAC6-209ENST00000440653 IPO8O15397 1037 aaKnown RBP11.65□□□□□ -0.54
HDAC6-209ENST00000440653 MSH5O43196 834 aa11.65□□□□□ -0.54
HDAC6-209ENST00000440653 FSTL1Q12841 308 aa11.65□□□□□ -0.54
HDAC6-209ENST00000440653 MVPQ14764 893 aaKnown RBP11.65□□□□□ -0.54
HDAC6-209ENST00000440653 COL23A1Q86Y22 540 aaPredicted RBP11.65□□□□□ -0.54
HDAC6-209ENST00000440653 ABTB2Q8N961 1025 aa11.65□□□□□ -0.54
HDAC6-209ENST00000440653 IGSF1Q8N6C5 1336 aa11.64□□□□□ -0.55
HDAC6-209ENST00000440653 EXOSC9Q06265 439 aaKnown RBP11.64□□□□□ -0.55
HDAC6-209ENST00000440653 EIF4A2Q14240 407 aaKnown RBP11.64□□□□□ -0.55
HDAC6-209ENST00000440653 RRS1Q15050 365 aaKnown RBP11.64□□□□□ -0.55
HDAC6-209ENST00000440653 DZIP1LQ8IYY4 767 aaKnown RBP11.64□□□□□ -0.55
HDAC6-209ENST00000440653 FRAT1Q92837 279 aaPredicted RBP11.64□□□□□ -0.55
HDAC6-209ENST00000440653 DDX19BQ9UMR2 479 aa11.64□□□□□ -0.55
HDAC6-209ENST00000440653 AXIN2Q9Y2T1 843 aa11.64□□□□□ -0.55
HDAC6-209ENST00000440653 CACNA1FO60840 1977 aa11.64□□□□□ -0.55
HDAC6-209ENST00000440653 ERICH6Q7L0X2 663 aa11.63□□□□□ -0.55
HDAC6-209ENST00000440653 C16orf71Q8IYS4 520 aaPredicted RBP11.63□□□□□ -0.55
HDAC6-209ENST00000440653 TSR2Q969E8 191 aaKnown RBP11.63□□□□□ -0.55
HDAC6-209ENST00000440653 CDCA7Q9BWT1 371 aaPredicted RBP11.63□□□□□ -0.55
HDAC6-209ENST00000440653 KAT6BQ8WYB5 2073 aa11.63□□□□□ -0.55
HDAC6-209ENST00000440653 MAP3K19Q56UN5 1328 aa11.62□□□□□ -0.55
HDAC6-209ENST00000440653 HMOX1P09601 288 aa11.62□□□□□ -0.55
HDAC6-209ENST00000440653 ZNF853P0CG23 659 aa11.62□□□□□ -0.55
HDAC6-209ENST00000440653 ATF7IPQ6VMQ6 1270 aa11.62□□□□□ -0.55
HDAC6-209ENST00000440653 PANK1Q8TE04 598 aa11.62□□□□□ -0.55
HDAC6-209ENST00000440653 CFAP44Q96MT7 982 aa11.62□□□□□ -0.55
HDAC6-209ENST00000440653 BACH2Q9BYV9 841 aa11.62□□□□□ -0.55
HDAC6-209ENST00000440653 COG6Q9Y2V7 657 aa11.62□□□□□ -0.55
HDAC6-209ENST00000440653 WDR17Q8IZU2 1322 aa11.61□□□□□ -0.55
HDAC6-209ENST00000440653 PDE4AP27815 886 aa11.61□□□□□ -0.55
HDAC6-209ENST00000440653 ARHGAP45Q92619 1136 aa11.61□□□□□ -0.55
HDAC6-209ENST00000440653 FOXN1O15353 648 aa11.6□□□□□ -0.55
HDAC6-209ENST00000440653 MLLT1Q03111 559 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms