RNA–Protein interactions for RNA: ENST00000440053.1

VIL1-204, Transcript of villin 1, humanhuman

TSL 1 (best) BASIC

Gene VIL1, Length 1,454 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIL1-204ENST00000440053 RBM42Q9BTD8 480 aaKnown RBP27.97■■■□□ 2.07
VIL1-204ENST00000440053 LGR6Q9HBX8 967 aa27.97■■■□□ 2.07
VIL1-204ENST00000440053 MTHFSDQ2M296 383 aaKnown RBP27.96■■■□□ 2.07
VIL1-204ENST00000440053 MSL1Q68DK7 614 aa27.96■■■□□ 2.07
VIL1-204ENST00000440053 AK7Q96M32 723 aa27.96■■■□□ 2.07
VIL1-204ENST00000440053 COL3A1P02461 1466 aaPredicted RBP27.96■■■□□ 2.07
VIL1-204ENST00000440053 QSER1Q2KHR3 1735 aa27.96■■■□□ 2.07
VIL1-204ENST00000440053 AKAP4Q5JQC9 854 aa27.95■■■□□ 2.07
VIL1-204ENST00000440053 TAF1LQ8IZX4 1826 aa27.95■■■□□ 2.06
VIL1-204ENST00000440053 PHF14O94880 888 aa27.95■■■□□ 2.06
VIL1-204ENST00000440053 PPP2R1AP30153 589 aa27.94■■■□□ 2.06
VIL1-204ENST00000440053 C4BP0C0L5 1744 aa27.93■■■□□ 2.06
VIL1-204ENST00000440053 POLD1P28340 1107 aa27.92■■■□□ 2.06
VIL1-204ENST00000440053 KLHL34Q8N239 644 aa27.91■■■□□ 2.06
VIL1-204ENST00000440053 PTCD1O75127 700 aaKnown RBP27.9■■■□□ 2.06
VIL1-204ENST00000440053 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.89■■■□□ 2.06
VIL1-204ENST00000440053 RNMTO43148 476 aaKnown RBP27.89■■■□□ 2.06
VIL1-204ENST00000440053 HMGB2P26583 209 aaKnown RBP27.89■■■□□ 2.06
VIL1-204ENST00000440053 FLAD1Q8NFF5 587 aa27.89■■■□□ 2.06
VIL1-204ENST00000440053 GNPATO15228 680 aa27.88■■■□□ 2.05
VIL1-204ENST00000440053 CFAP53Q96M91 514 aa27.87■■■□□ 2.05
VIL1-204ENST00000440053 SLC52A2Q9HAB3 445 aa27.86■■■□□ 2.05
VIL1-204ENST00000440053 DCAF8L1A6NGE4 600 aa27.84■■■□□ 2.05
VIL1-204ENST00000440053 SLC39A6Q13433 755 aa27.84■■■□□ 2.05
VIL1-204ENST00000440053 PHACTR3Q96KR7 559 aa27.84■■■□□ 2.05
VIL1-204ENST00000440053 SSFA2P28290 1259 aa27.83■■■□□ 2.05
VIL1-204ENST00000440053 COL24A1Q17RW2 1714 aa27.83■■■□□ 2.05
VIL1-204ENST00000440053 NLGN2Q8NFZ4 835 aa27.82■■■□□ 2.04
VIL1-204ENST00000440053 UBR3Q6ZT12 1888 aa27.81■■■□□ 2.04
VIL1-204ENST00000440053 PRKAR2BP31323 418 aa27.81■■■□□ 2.04
VIL1-204ENST00000440053 RSPH6AQ9H0K4 717 aa27.81■■■□□ 2.04
VIL1-204ENST00000440053 SCN11AQ9UI33 1791 aa27.8■■■□□ 2.04
VIL1-204ENST00000440053 U2AF1L5P0DN76 240 aaPredicted RBP27.8■■■□□ 2.04
VIL1-204ENST00000440053 U2AF1Q01081 240 aaKnown RBP eCLIP27.8■■■□□ 2.04
VIL1-204ENST00000440053 MAP3K5Q99683 1374 aa27.8■■■□□ 2.04
VIL1-204ENST00000440053 UTRNP46939 3433 aa27.8■■■□□ 2.04
VIL1-204ENST00000440053 IL17REQ8NFR9 667 aa27.79■■■□□ 2.04
VIL1-204ENST00000440053 NUDCQ9Y266 331 aa27.79■■■□□ 2.04
VIL1-204ENST00000440053 RC3H1Q5TC82 1133 aaKnown RBP27.78■■■□□ 2.04
VIL1-204ENST00000440053 RTCBQ9Y3I0 505 aaKnown RBP27.78■■■□□ 2.04
VIL1-204ENST00000440053 DDX10Q13206 875 aaKnown RBP27.77■■■□□ 2.04
VIL1-204ENST00000440053 TRAPPC3LQ5T215 181 aa27.77■■■□□ 2.04
VIL1-204ENST00000440053 GNAT3A8MTJ3 354 aa27.76■■■□□ 2.04
VIL1-204ENST00000440053 ARHGEF1Q92888 912 aaKnown RBP27.76■■■□□ 2.04
VIL1-204ENST00000440053 GAS2L2Q8NHY3 880 aa27.76■■■□□ 2.03
VIL1-204ENST00000440053 CNTNAP4Q9C0A0 1308 aa27.75■■■□□ 2.03
VIL1-204ENST00000440053 RPS6KA4O75676 772 aa27.75■■■□□ 2.03
VIL1-204ENST00000440053 CRKLP46109 303 aaKnown RBP27.75■■■□□ 2.03
VIL1-204ENST00000440053 DNAJC10Q8IXB1 793 aa27.75■■■□□ 2.03
VIL1-204ENST00000440053 YY1P25490 414 aa27.74■■■□□ 2.03
VIL1-204ENST00000440053 ZNF831Q5JPB2 1677 aa27.73■■■□□ 2.03
VIL1-204ENST00000440053 GPR162Q16538 588 aa27.72■■■□□ 2.03
VIL1-204ENST00000440053 PELP1Q8IZL8 1130 aaKnown RBP27.72■■■□□ 2.03
VIL1-204ENST00000440053 MRC1P22897 1456 aa27.72■■■□□ 2.03
VIL1-204ENST00000440053 INTS5Q6P9B9 1019 aaKnown RBP27.71■■■□□ 2.03
VIL1-204ENST00000440053 FCHSD2O94868 740 aa27.7■■■□□ 2.03
VIL1-204ENST00000440053 COL5A3P25940 1745 aaPredicted RBP27.7■■■□□ 2.03
VIL1-204ENST00000440053 ADAMTS7Q9UKP4 1686 aa27.7■■■□□ 2.03
VIL1-204ENST00000440053 MYH14Q7Z406 1995 aaKnown RBP27.7■■■□□ 2.02
VIL1-204ENST00000440053 RFC4P35249 363 aa27.69■■■□□ 2.02
VIL1-204ENST00000440053 TEFQ10587 303 aa27.69■■■□□ 2.02
VIL1-204ENST00000440053 GOLGB1Q14789 3259 aaKnown RBP27.68■■■□□ 2.02
VIL1-204ENST00000440053 TJP1Q07157 1748 aa27.68■■■□□ 2.02
VIL1-204ENST00000440053 VIRMAQ69YN4 1812 aaKnown RBP27.68■■■□□ 2.02
VIL1-204ENST00000440053 MMP10P09238 476 aa27.67■■■□□ 2.02
VIL1-204ENST00000440053 CYP19A1P11511 503 aaPredicted RBP27.67■■■□□ 2.02
VIL1-204ENST00000440053 GYS1P13807 737 aa27.67■■■□□ 2.02
VIL1-204ENST00000440053 ADRA2BP18089 450 aa27.67■■■□□ 2.02
VIL1-204ENST00000440053 SRP68Q9UHB9 627 aaKnown RBP27.67■■■□□ 2.02
VIL1-204ENST00000440053 KCPQ6ZWJ8 1503 aa27.67■■■□□ 2.02
VIL1-204ENST00000440053 CD2APQ9Y5K6 639 aa27.66■■■□□ 2.02
VIL1-204ENST00000440053 KCNQ3O43525 872 aa27.64■■■□□ 2.02
VIL1-204ENST00000440053 DCTN1Q14203 1278 aa27.64■■■□□ 2.02
VIL1-204ENST00000440053 MCM10Q7L590 875 aa27.64■■■□□ 2.02
VIL1-204ENST00000440053 CCDC87Q9NVE4 849 aa27.64■■■□□ 2.02
VIL1-204ENST00000440053 YBX3P16989 372 aaKnown RBP eCLIP27.64■■■□□ 2.01
VIL1-204ENST00000440053 ZNF790Q6PG37 636 aa27.64■■■□□ 2.01
VIL1-204ENST00000440053 TTC5Q8N0Z6 440 aa27.64■■■□□ 2.01
VIL1-204ENST00000440053 NLGN1Q8N2Q7 840 aa27.64■■■□□ 2.01
VIL1-204ENST00000440053 ZNF496Q96IT1 587 aaPredicted RBP27.64■■■□□ 2.01
VIL1-204ENST00000440053 CEMIPQ8WUJ3 1361 aa27.63■■■□□ 2.01
VIL1-204ENST00000440053 WWC3Q9ULE0 1092 aa27.63■■■□□ 2.01
VIL1-204ENST00000440053 VSIG10Q8N0Z9 540 aa27.61■■■□□ 2.01
VIL1-204ENST00000440053 FKBP8Q14318 412 aa27.6■■■□□ 2.01
VIL1-204ENST00000440053 RALBP1Q15311 655 aa27.6■■■□□ 2.01
VIL1-204ENST00000440053 ZBTB1Q9Y2K1 713 aa27.6■■■□□ 2.01
VIL1-204ENST00000440053 BTBD11A6QL63 1104 aa27.59■■■□□ 2.01
VIL1-204ENST00000440053 RTF1Q92541 710 aaKnown RBP27.59■■■□□ 2.01
VIL1-204ENST00000440053 PLEKHF1Q96S99 279 aa27.58■■■□□ 2.01
VIL1-204ENST00000440053 SOS1Q07889 1333 aaPredicted RBP27.58■■■□□ 2.01
VIL1-204ENST00000440053 CICQ96RK0 1608 aaPredicted RBP27.58■■■□□ 2.01
VIL1-204ENST00000440053 CANXP27824 592 aaKnown RBP27.57■■■□□ 2
VIL1-204ENST00000440053 USP42Q9H9J4 1324 aaKnown RBP27.57■■■□□ 2
VIL1-204ENST00000440053 USPL1Q5W0Q7 1092 aa27.57■■■□□ 2
VIL1-204ENST00000440053 HEG1Q9ULI3 1381 aa27.56■■■□□ 2
VIL1-204ENST00000440053 C4AP0C0L4 1744 aa27.54■■■□□ 2
VIL1-204ENST00000440053 FMNL2Q96PY5 1086 aa27.54■■■□□ 2
VIL1-204ENST00000440053 PARP3Q9Y6F1 533 aa27.54■■■□□ 2
VIL1-204ENST00000440053 SIPA1L3O60292 1781 aaPredicted RBP27.54■■■□□ 2
VIL1-204ENST00000440053 UBR2Q8IWV8 1755 aa27.54■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 211.7 ms