RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 LOC102724428A0A0B4J2F2 783 aa15.65■□□□□ 0.1
HSPG2-206ENST00000439717 SIK1P57059 783 aa15.65■□□□□ 0.1
HSPG2-206ENST00000439717 SLC15A2Q16348 729 aa15.65■□□□□ 0.1
HSPG2-206ENST00000439717 IL17REQ8NFR9 667 aa15.65■□□□□ 0.1
HSPG2-206ENST00000439717 RTF1Q92541 710 aaKnown RBP15.65■□□□□ 0.1
HSPG2-206ENST00000439717 ANO8Q9HCE9 1232 aaPredicted RBP15.65■□□□□ 0.1
HSPG2-206ENST00000439717 CEMIPQ8WUJ3 1361 aa15.64■□□□□ 0.09
HSPG2-206ENST00000439717 PSDA5PKW4 1024 aaPredicted RBP15.64■□□□□ 0.09
HSPG2-206ENST00000439717 TEFQ10587 303 aa15.64■□□□□ 0.09
HSPG2-206ENST00000439717 NFE2L2Q16236 605 aa15.64■□□□□ 0.09
HSPG2-206ENST00000439717 AKT1S1Q96B36 256 aa15.63■□□□□ 0.09
HSPG2-206ENST00000439717 RUNDC1Q96C34 613 aa15.63■□□□□ 0.09
HSPG2-206ENST00000439717 ADAMTS8Q9UP79 889 aa15.63■□□□□ 0.09
HSPG2-206ENST00000439717 KCNQ4P56696 695 aa15.62■□□□□ 0.09
HSPG2-206ENST00000439717 VIRMAQ69YN4 1812 aaKnown RBP15.61■□□□□ 0.09
HSPG2-206ENST00000439717 ATP6V1AP38606 617 aa15.61■□□□□ 0.09
HSPG2-206ENST00000439717 ZNF831Q5JPB2 1677 aa15.6■□□□□ 0.09
HSPG2-206ENST00000439717 ZNF827Q17R98 1081 aa15.6■□□□□ 0.09
HSPG2-206ENST00000439717 CCDC184Q52MB2 194 aa15.6■□□□□ 0.09
HSPG2-206ENST00000439717 MCM10Q7L590 875 aa15.6■□□□□ 0.09
HSPG2-206ENST00000439717 RBM42Q9BTD8 480 aaKnown RBP15.6■□□□□ 0.09
HSPG2-206ENST00000439717 MRS2Q9HD23 443 aa15.6■□□□□ 0.09
HSPG2-206ENST00000439717 C5P01031 1676 aa15.6■□□□□ 0.09
HSPG2-206ENST00000439717 TMPOP42166 694 aaKnown RBP15.59■□□□□ 0.09
HSPG2-206ENST00000439717 LMOD3Q0VAK6 560 aa15.59■□□□□ 0.09
HSPG2-206ENST00000439717 CCDC146Q8IYE0 955 aa15.59■□□□□ 0.09
HSPG2-206ENST00000439717 SIPA1L3O60292 1781 aaPredicted RBP15.58■□□□□ 0.08
HSPG2-206ENST00000439717 PTCD1O75127 700 aaKnown RBP15.58■□□□□ 0.08
HSPG2-206ENST00000439717 RIPK4P57078 832 aa15.58■□□□□ 0.08
HSPG2-206ENST00000439717 SLC39A6Q13433 755 aa15.58■□□□□ 0.08
HSPG2-206ENST00000439717 ITPK1Q13572 414 aa15.58■□□□□ 0.08
HSPG2-206ENST00000439717 PNISRQ8TF01 805 aaKnown RBP15.58■□□□□ 0.08
HSPG2-206ENST00000439717 SLC4A9Q96Q91 983 aa15.58■□□□□ 0.08
HSPG2-206ENST00000439717 TFCP2L1Q9NZI6 479 aa15.58■□□□□ 0.08
HSPG2-206ENST00000439717 TAF1LQ8IZX4 1826 aa15.57■□□□□ 0.08
HSPG2-206ENST00000439717 BTBD11A6QL63 1104 aa15.57■□□□□ 0.08
HSPG2-206ENST00000439717 DCTN1Q14203 1278 aa15.57■□□□□ 0.08
HSPG2-206ENST00000439717 ZNF790Q6PG37 636 aa15.57■□□□□ 0.08
HSPG2-206ENST00000439717 TTC5Q8N0Z6 440 aa15.57■□□□□ 0.08
HSPG2-206ENST00000439717 LINC00116Q8NCU8 138 aa15.57■□□□□ 0.08
HSPG2-206ENST00000439717 C4BP0C0L5 1744 aa15.57■□□□□ 0.08
HSPG2-206ENST00000439717 QSER1Q2KHR3 1735 aa15.57■□□□□ 0.08
HSPG2-206ENST00000439717 DLG5Q8TDM6 1919 aa15.56■□□□□ 0.08
HSPG2-206ENST00000439717 TAF7Q15545 349 aaPredicted RBP15.56■□□□□ 0.08
HSPG2-206ENST00000439717 VSIG10Q8N0Z9 540 aa15.56■□□□□ 0.08
HSPG2-206ENST00000439717 AK7Q96M32 723 aa15.56■□□□□ 0.08
HSPG2-206ENST00000439717 KCPQ6ZWJ8 1503 aa15.56■□□□□ 0.08
HSPG2-206ENST00000439717 CICQ96RK0 1608 aaPredicted RBP15.56■□□□□ 0.08
HSPG2-206ENST00000439717 CASZ1Q86V15 1759 aa15.55■□□□□ 0.08
HSPG2-206ENST00000439717 PNPLA7Q6ZV29 1317 aa15.55■□□□□ 0.08
HSPG2-206ENST00000439717 RC3H1Q5TC82 1133 aaKnown RBP15.55■□□□□ 0.08
HSPG2-206ENST00000439717 FLAD1Q8NFF5 587 aa15.55■□□□□ 0.08
HSPG2-206ENST00000439717 CNTNAP4Q9C0A0 1308 aa15.54■□□□□ 0.08
HSPG2-206ENST00000439717 UBR2Q8IWV8 1755 aa15.54■□□□□ 0.08
HSPG2-206ENST00000439717 SLC16A10Q8TF71 515 aa15.53■□□□□ 0.08
HSPG2-206ENST00000439717 FMNL2Q96PY5 1086 aa15.53■□□□□ 0.08
HSPG2-206ENST00000439717 PDGFDQ9GZP0 370 aaPredicted RBP15.53■□□□□ 0.08
HSPG2-206ENST00000439717 RRP7AQ9Y3A4 280 aaKnown RBP15.53■□□□□ 0.08
HSPG2-206ENST00000439717 COL5A3P25940 1745 aaPredicted RBP15.53■□□□□ 0.08
HSPG2-206ENST00000439717 SSFA2P28290 1259 aa15.52■□□□□ 0.08
HSPG2-206ENST00000439717 NEUROD2Q15784 382 aa15.52■□□□□ 0.08
HSPG2-206ENST00000439717 ZNF496Q96IT1 587 aaPredicted RBP15.52■□□□□ 0.08
HSPG2-206ENST00000439717 TEX13AQ9BXU3 409 aaPredicted RBP15.52■□□□□ 0.08
HSPG2-206ENST00000439717 SPON1Q9HCB6 807 aa15.52■□□□□ 0.08
HSPG2-206ENST00000439717 BABAM1Q9NWV8 329 aa15.52■□□□□ 0.08
HSPG2-206ENST00000439717 LRP5O75197 1615 aa15.52■□□□□ 0.08
HSPG2-206ENST00000439717 TJP1Q07157 1748 aa15.51■□□□□ 0.07
HSPG2-206ENST00000439717 HEG1Q9ULI3 1381 aa15.51■□□□□ 0.07
HSPG2-206ENST00000439717 APAF1O14727 1248 aa15.51■□□□□ 0.07
HSPG2-206ENST00000439717 GNPATO15228 680 aa15.51■□□□□ 0.07
HSPG2-206ENST00000439717 DNAJC10Q8IXB1 793 aa15.51■□□□□ 0.07
HSPG2-206ENST00000439717 THUMPD2Q9BTF0 503 aaKnown RBP15.51■□□□□ 0.07
HSPG2-206ENST00000439717 MTFR1LQ9H019 292 aa15.51■□□□□ 0.07
HSPG2-206ENST00000439717 TRIM35Q9UPQ4 493 aa15.51■□□□□ 0.07
HSPG2-206ENST00000439717 TUBGCP6Q96RT7 1819 aa15.51■□□□□ 0.07
HSPG2-206ENST00000439717 KCNQ3O43525 872 aa15.5■□□□□ 0.07
HSPG2-206ENST00000439717 RPS6KA4O75676 772 aa15.5■□□□□ 0.07
HSPG2-206ENST00000439717 CRKLP46109 303 aaKnown RBP15.5■□□□□ 0.07
HSPG2-206ENST00000439717 DIEXFQ68CQ4 756 aaKnown RBP15.5■□□□□ 0.07
HSPG2-206ENST00000439717 COL23A1Q86Y22 540 aaPredicted RBP15.5■□□□□ 0.07
HSPG2-206ENST00000439717 RTCBQ9Y3I0 505 aaKnown RBP15.5■□□□□ 0.07
HSPG2-206ENST00000439717 UBR3Q6ZT12 1888 aa15.49■□□□□ 0.07
HSPG2-206ENST00000439717 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.49■□□□□ 0.07
HSPG2-206ENST00000439717 CCER2I3L3R5 266 aa15.49■□□□□ 0.07
HSPG2-206ENST00000439717 ZBTB7AO95365 584 aa15.49■□□□□ 0.07
HSPG2-206ENST00000439717 STARD3NLO95772 234 aa15.49■□□□□ 0.07
HSPG2-206ENST00000439717 CYP19A1P11511 503 aaPredicted RBP15.49■□□□□ 0.07
HSPG2-206ENST00000439717 ADRA2BP18089 450 aa15.49■□□□□ 0.07
HSPG2-206ENST00000439717 NCBP3Q53F19 620 aaKnown RBP15.49■□□□□ 0.07
HSPG2-206ENST00000439717 MSH5O43196 834 aa15.48■□□□□ 0.07
HSPG2-206ENST00000439717 TRAPPC3LQ5T215 181 aa15.48■□□□□ 0.07
HSPG2-206ENST00000439717 INTS5Q6P9B9 1019 aaKnown RBP15.48■□□□□ 0.07
HSPG2-206ENST00000439717 AMIGO3Q86WK7 504 aa15.48■□□□□ 0.07
HSPG2-206ENST00000439717 CCDC87Q9NVE4 849 aa15.48■□□□□ 0.07
HSPG2-206ENST00000439717 MIS18AQ9NYP9 233 aa15.48■□□□□ 0.07
HSPG2-206ENST00000439717 PHF14O94880 888 aa15.47■□□□□ 0.07
HSPG2-206ENST00000439717 SNRPA1P09661 255 aaKnown RBP15.47■□□□□ 0.07
HSPG2-206ENST00000439717 CALD1Q05682 793 aaKnown RBP15.47■□□□□ 0.07
HSPG2-206ENST00000439717 TSPYL4Q9UJ04 414 aa15.47■□□□□ 0.07
HSPG2-206ENST00000439717 KDM3BQ7LBC6 1761 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms