RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 C17orf53Q8N3J3 647 aaPredicted RBP16.57■□□□□ 0.24
PCNX3-202ENST00000439247 CCDC61Q9Y6R9 512 aa16.57■□□□□ 0.24
PCNX3-202ENST00000439247 PNPLA6Q8IY17 1366 aa16.57■□□□□ 0.24
PCNX3-202ENST00000439247 NEK4P51957 841 aa16.56■□□□□ 0.24
PCNX3-202ENST00000439247 ZRANB1Q9UGI0 708 aa16.56■□□□□ 0.24
PCNX3-202ENST00000439247 PTMAP06454 111 aaKnown RBP16.56■□□□□ 0.24
PCNX3-202ENST00000439247 GNAI1P63096 354 aa16.56■□□□□ 0.24
PCNX3-202ENST00000439247 CWC22Q9HCG8 908 aaKnown RBP16.56■□□□□ 0.24
PCNX3-202ENST00000439247 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.55■□□□□ 0.24
PCNX3-202ENST00000439247 TMX3Q96JJ7 454 aa16.55■□□□□ 0.24
PCNX3-202ENST00000439247 CHMP4BQ9H444 224 aaKnown RBP16.55■□□□□ 0.24
PCNX3-202ENST00000439247 STRCQ7RTU9 1775 aa16.55■□□□□ 0.24
PCNX3-202ENST00000439247 GADD45BO75293 160 aaPredicted RBP16.54■□□□□ 0.24
PCNX3-202ENST00000439247 HDGFL2Q7Z4V5 671 aaPredicted RBP16.54■□□□□ 0.24
PCNX3-202ENST00000439247 ZNF428Q96B54 188 aa16.54■□□□□ 0.24
PCNX3-202ENST00000439247 CCDC39Q9UFE4 941 aa16.54■□□□□ 0.24
PCNX3-202ENST00000439247 NALCNQ8IZF0 1738 aa16.54■□□□□ 0.24
PCNX3-202ENST00000439247 ZNF853P0CG23 659 aa16.54■□□□□ 0.24
PCNX3-202ENST00000439247 MEIS3Q99687 375 aa16.54■□□□□ 0.24
PCNX3-202ENST00000439247 IFT57Q9NWB7 429 aa16.54■□□□□ 0.24
PCNX3-202ENST00000439247 CEP85Q6P2H3 762 aa16.54■□□□□ 0.24
PCNX3-202ENST00000439247 ZHX1Q9UKY1 873 aaPredicted RBP16.54■□□□□ 0.24
PCNX3-202ENST00000439247 RGPD8O14715 1765 aaPredicted RBP16.54■□□□□ 0.24
PCNX3-202ENST00000439247 DNTTIP2Q5QJE6 756 aaKnown RBP16.53■□□□□ 0.24
PCNX3-202ENST00000439247 API5Q9BZZ5 524 aaKnown RBP16.53■□□□□ 0.24
PCNX3-202ENST00000439247 PALD1Q9ULE6 856 aa16.53■□□□□ 0.24
PCNX3-202ENST00000439247 DTNBO60941 627 aa16.53■□□□□ 0.24
PCNX3-202ENST00000439247 SASS6Q6UVJ0 657 aa16.53■□□□□ 0.24
PCNX3-202ENST00000439247 ANKRD44Q8N8A2 993 aa16.53■□□□□ 0.24
PCNX3-202ENST00000439247 STRCP1A6NGW2 1772 aa16.53■□□□□ 0.24
PCNX3-202ENST00000439247 C14orf37Q86TY3 774 aa16.52■□□□□ 0.24
PCNX3-202ENST00000439247 CPSF1Q10570 1443 aaKnown RBP16.52■□□□□ 0.24
PCNX3-202ENST00000439247 DYNC1I1O14576 645 aa16.52■□□□□ 0.24
PCNX3-202ENST00000439247 PROSER2Q86WR7 435 aaPredicted RBP16.52■□□□□ 0.24
PCNX3-202ENST00000439247 ATP10DQ9P241 1426 aa16.52■□□□□ 0.23
PCNX3-202ENST00000439247 ACEP12821 1306 aa16.52■□□□□ 0.23
PCNX3-202ENST00000439247 CSPP1Q1MSJ5 1256 aa16.51■□□□□ 0.23
PCNX3-202ENST00000439247 CFAP44Q96MT7 982 aa16.51■□□□□ 0.23
PCNX3-202ENST00000439247 MAP7D2Q96T17 732 aa16.51■□□□□ 0.23
PCNX3-202ENST00000439247 ERC2O15083 957 aa16.5■□□□□ 0.23
PCNX3-202ENST00000439247 RRS1Q15050 365 aaKnown RBP16.5■□□□□ 0.23
PCNX3-202ENST00000439247 CASC1Q6TDU7 716 aa16.5■□□□□ 0.23
PCNX3-202ENST00000439247 TSPY26PQ9H489 355 aa16.5■□□□□ 0.23
PCNX3-202ENST00000439247 MSH6P52701 1360 aa16.5■□□□□ 0.23
PCNX3-202ENST00000439247 NME9Q86XW9 330 aa16.5■□□□□ 0.23
PCNX3-202ENST00000439247 NWD1Q149M9 1564 aa16.5■□□□□ 0.23
PCNX3-202ENST00000439247 CDC42BPGQ6DT37 1551 aa16.5■□□□□ 0.23
PCNX3-202ENST00000439247 UPF3BQ9BZI7 483 aaKnown RBP16.5■□□□□ 0.23
PCNX3-202ENST00000439247 TTC12Q9H892 705 aaPredicted RBP16.5■□□□□ 0.23
PCNX3-202ENST00000439247 TOPAZ1Q8N9V7 1692 aa16.49■□□□□ 0.23
PCNX3-202ENST00000439247 USP25Q9UHP3 1055 aa16.49■□□□□ 0.23
PCNX3-202ENST00000439247 REC8O95072 547 aa16.49■□□□□ 0.23
PCNX3-202ENST00000439247 IL13P35225 146 aa16.49■□□□□ 0.23
PCNX3-202ENST00000439247 BRD1O95696 1058 aa16.48■□□□□ 0.23
PCNX3-202ENST00000439247 KIAA2012Q0VF49 1180 aa16.48■□□□□ 0.23
PCNX3-202ENST00000439247 ADGRL3Q9HAR2 1447 aa16.48■□□□□ 0.23
PCNX3-202ENST00000439247 ZNF335Q9H4Z2 1342 aaPredicted RBP16.48■□□□□ 0.23
PCNX3-202ENST00000439247 EXOC6BQ9Y2D4 811 aa16.48■□□□□ 0.23
PCNX3-202ENST00000439247 PLEKHG3A1L390 1219 aa16.47■□□□□ 0.23
PCNX3-202ENST00000439247 MCM5P33992 734 aa16.47■□□□□ 0.23
PCNX3-202ENST00000439247 ZNF710Q8N1W2 664 aa16.47■□□□□ 0.23
PCNX3-202ENST00000439247 LARP6Q9BRS8 491 aaKnown RBP16.47■□□□□ 0.23
PCNX3-202ENST00000439247 RTL1A6NKG5 1358 aa16.47■□□□□ 0.23
PCNX3-202ENST00000439247 ANKRD26Q9UPS8 1709 aa16.47■□□□□ 0.23
PCNX3-202ENST00000439247 F6X3S4 739 aa16.47■□□□□ 0.23
PCNX3-202ENST00000439247 SLC4A10Q6U841 1118 aa16.47■□□□□ 0.23
PCNX3-202ENST00000439247 MIS18AQ9NYP9 233 aa16.47■□□□□ 0.23
PCNX3-202ENST00000439247 MAP2P11137 1827 aaKnown RBP16.47■□□□□ 0.23
PCNX3-202ENST00000439247 TMEM94Q12767 1356 aa16.46■□□□□ 0.23
PCNX3-202ENST00000439247 MCM10Q7L590 875 aa16.46■□□□□ 0.23
PCNX3-202ENST00000439247 AEBP1Q8IUX7 1158 aa16.46■□□□□ 0.23
PCNX3-202ENST00000439247 FMN2Q9NZ56 1722 aa16.46■□□□□ 0.23
PCNX3-202ENST00000439247 MBD3O95983 291 aa16.46■□□□□ 0.23
PCNX3-202ENST00000439247 PDE1AP54750 535 aa16.46■□□□□ 0.23
PCNX3-202ENST00000439247 USP48Q86UV5 1035 aa16.46■□□□□ 0.23
PCNX3-202ENST00000439247 RGS12O14924 1447 aa16.46■□□□□ 0.22
PCNX3-202ENST00000439247 CBX1P83916 185 aa16.45■□□□□ 0.22
PCNX3-202ENST00000439247 NGDNQ8NEJ9 315 aaKnown RBP16.45■□□□□ 0.22
PCNX3-202ENST00000439247 EDC4Q6P2E9 1401 aaKnown RBP16.45■□□□□ 0.22
PCNX3-202ENST00000439247 DLG5Q8TDM6 1919 aa16.45■□□□□ 0.22
PCNX3-202ENST00000439247 PLCB2Q00722 1185 aa16.45■□□□□ 0.22
PCNX3-202ENST00000439247 RPAP2Q8IXW5 612 aaPredicted RBP16.45■□□□□ 0.22
PCNX3-202ENST00000439247 ANO2Q9NQ90 1003 aa16.45■□□□□ 0.22
PCNX3-202ENST00000439247 TCHHQ07283 1943 aa16.45■□□□□ 0.22
PCNX3-202ENST00000439247 AKAP12Q02952 1782 aa16.44■□□□□ 0.22
PCNX3-202ENST00000439247 RILPL2Q969X0 211 aa16.44■□□□□ 0.22
PCNX3-202ENST00000439247 ORAI2Q96SN7 254 aa16.44■□□□□ 0.22
PCNX3-202ENST00000439247 ITSN1Q15811 1721 aa16.44■□□□□ 0.22
PCNX3-202ENST00000439247 MON2Q7Z3U7 1717 aa16.44■□□□□ 0.22
PCNX3-202ENST00000439247 MYRIPQ8NFW9 859 aa16.44■□□□□ 0.22
PCNX3-202ENST00000439247 IL25Q9H293 177 aa16.44■□□□□ 0.22
PCNX3-202ENST00000439247 HCLS1P14317 486 aaPredicted RBP16.43■□□□□ 0.22
PCNX3-202ENST00000439247 SMAP1Q8IYB5 467 aaPredicted RBP16.43■□□□□ 0.22
PCNX3-202ENST00000439247 USP6P35125 1406 aa16.43■□□□□ 0.22
PCNX3-202ENST00000439247 ESCO1Q5FWF5 840 aa16.43■□□□□ 0.22
PCNX3-202ENST00000439247 G2E3Q7L622 706 aa16.43■□□□□ 0.22
PCNX3-202ENST00000439247 NOLC1Q14978 699 aaKnown RBP eCLIP16.43■□□□□ 0.22
PCNX3-202ENST00000439247 CCDC94Q9BW85 323 aaPredicted RBP16.43■□□□□ 0.22
PCNX3-202ENST00000439247 TTC21BQ7Z4L5 1316 aa16.42■□□□□ 0.22
PCNX3-202ENST00000439247 UNC5CLQ8IV45 518 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms