RNA–Protein interactions for RNA: ENST00000438265.5

RPE-211, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 3

Gene RPE, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-211ENST00000438265 POLD1P28340 1107 aa11.33□□□□□ -0.6
RPE-211ENST00000438265 AEBP1Q8IUX7 1158 aa11.33□□□□□ -0.6
RPE-211ENST00000438265 ATG3Q9NT62 314 aa11.33□□□□□ -0.6
RPE-211ENST00000438265 CICQ96RK0 1608 aaPredicted RBP11.33□□□□□ -0.6
RPE-211ENST00000438265 SBF1O95248 1867 aa11.33□□□□□ -0.6
RPE-211ENST00000438265 CCDC88AQ3V6T2 1871 aa11.33□□□□□ -0.6
RPE-211ENST00000438265 IGSF1Q8N6C5 1336 aa11.33□□□□□ -0.6
RPE-211ENST00000438265 LOC102724428A0A0B4J2F2 783 aa11.32□□□□□ -0.6
RPE-211ENST00000438265 SIK1P57059 783 aa11.32□□□□□ -0.6
RPE-211ENST00000438265 PANK3Q9H999 370 aa11.32□□□□□ -0.6
RPE-211ENST00000438265 ARFGEF1Q9Y6D6 1849 aa11.32□□□□□ -0.6
RPE-211ENST00000438265 SIPA1L3O60292 1781 aaPredicted RBP11.31□□□□□ -0.6
RPE-211ENST00000438265 NPC1L1Q9UHC9 1359 aa11.31□□□□□ -0.6
RPE-211ENST00000438265 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.31□□□□□ -0.6
RPE-211ENST00000438265 UBR2Q8IWV8 1755 aa11.31□□□□□ -0.6
RPE-211ENST00000438265 C1QTNF8P60827 252 aa11.29□□□□□ -0.6
RPE-211ENST00000438265 SPG7Q9UQ90 795 aa11.29□□□□□ -0.6
RPE-211ENST00000438265 ADCY9O60503 1353 aa11.28□□□□□ -0.6
RPE-211ENST00000438265 PXDNLA1KZ92 1463 aa11.28□□□□□ -0.6
RPE-211ENST00000438265 IFNL2Q8IZJ0 200 aa11.28□□□□□ -0.6
RPE-211ENST00000438265 AK7Q96M32 723 aa11.28□□□□□ -0.6
RPE-211ENST00000438265 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.28□□□□□ -0.61e-7■■□□□ 14.3
RPE-211ENST00000438265 TMOD3Q9NYL9 352 aa11.28□□□□□ -0.6
RPE-211ENST00000438265 KNSTRNQ9Y448 316 aa11.28□□□□□ -0.6
RPE-211ENST00000438265 CACNA1SQ13698 1873 aa11.27□□□□□ -0.6
RPE-211ENST00000438265 ATP10DQ9P241 1426 aa11.27□□□□□ -0.6
RPE-211ENST00000438265 GNPATO15228 680 aa11.27□□□□□ -0.61
RPE-211ENST00000438265 ATP6V1AP38606 617 aa11.27□□□□□ -0.61
RPE-211ENST00000438265 SMARCC1Q92922 1105 aaPredicted RBP11.27□□□□□ -0.61
RPE-211ENST00000438265 ANKRD31Q8N7Z5 1873 aa11.26□□□□□ -0.61
RPE-211ENST00000438265 CD2APQ9Y5K6 639 aa11.26□□□□□ -0.61
RPE-211ENST00000438265 NRXN2Q9P2S2 1712 aa11.26□□□□□ -0.61
RPE-211ENST00000438265 DLEC1Q9Y238 1755 aa11.26□□□□□ -0.61
RPE-211ENST00000438265 KCPQ6ZWJ8 1503 aa11.25□□□□□ -0.61
RPE-211ENST00000438265 SENP3-EIF4A1A0A087X0R7 540 aa11.25□□□□□ -0.61
RPE-211ENST00000438265 PER1O15534 1290 aaPredicted RBP11.25□□□□□ -0.61
RPE-211ENST00000438265 SSFA2P28290 1259 aa11.25□□□□□ -0.61
RPE-211ENST00000438265 AMER1Q5JTC6 1135 aaPredicted RBP11.25□□□□□ -0.61
RPE-211ENST00000438265 COL3A1P02461 1466 aaPredicted RBP11.25□□□□□ -0.61
RPE-211ENST00000438265 IL13P35225 146 aa11.24□□□□□ -0.61
RPE-211ENST00000438265 ZNF530Q6P9A1 599 aaPredicted RBP11.24□□□□□ -0.61
RPE-211ENST00000438265 RBM42Q9BTD8 480 aaKnown RBP11.24□□□□□ -0.61
RPE-211ENST00000438265 C10orf71Q711Q0 1435 aa11.24□□□□□ -0.61
RPE-211ENST00000438265 MRC1P22897 1456 aa11.24□□□□□ -0.61
RPE-211ENST00000438265 DLG5Q8TDM6 1919 aa11.23□□□□□ -0.61
RPE-211ENST00000438265 MMP10P09238 476 aa11.23□□□□□ -0.61
RPE-211ENST00000438265 SULT6B1Q6IMI4 303 aa11.23□□□□□ -0.61
RPE-211ENST00000438265 FLAD1Q8NFF5 587 aa11.23□□□□□ -0.61
RPE-211ENST00000438265 ARHGEF1Q92888 912 aaKnown RBP11.23□□□□□ -0.61
RPE-211ENST00000438265 LGR6Q9HBX8 967 aa11.23□□□□□ -0.61
RPE-211ENST00000438265 SRP68Q9UHB9 627 aaKnown RBP11.23□□□□□ -0.61
RPE-211ENST00000438265 PLEKHG2Q9H7P9 1386 aa11.23□□□□□ -0.61
RPE-211ENST00000438265 ERVV-2B6SEH9 535 aa11.22□□□□□ -0.61
RPE-211ENST00000438265 GYS1P13807 737 aa11.22□□□□□ -0.61
RPE-211ENST00000438265 COL11A2P13942 1736 aaPredicted RBP11.22□□□□□ -0.61
RPE-211ENST00000438265 MORC1Q86VD1 984 aa11.22□□□□□ -0.61
RPE-211ENST00000438265 ZNF526Q8TF50 670 aaPredicted RBP11.22□□□□□ -0.61
RPE-211ENST00000438265 CNTNAP4Q9C0A0 1308 aa11.21□□□□□ -0.61
RPE-211ENST00000438265 PTCD1O75127 700 aaKnown RBP11.21□□□□□ -0.61
RPE-211ENST00000438265 GIGYF1O75420 1035 aaPredicted RBP11.21□□□□□ -0.61
RPE-211ENST00000438265 KCNA3P22001 575 aa11.21□□□□□ -0.61
RPE-211ENST00000438265 NFATC2IPQ8NCF5 419 aa11.21□□□□□ -0.61
RPE-211ENST00000438265 DCAF5Q96JK2 942 aa11.21□□□□□ -0.61
RPE-211ENST00000438265 A0A0G2JLW4 131 aa11.2□□□□□ -0.62
RPE-211ENST00000438265 GRIN3BO60391 1043 aa11.2□□□□□ -0.62
RPE-211ENST00000438265 HMOX1P09601 288 aa11.2□□□□□ -0.62
RPE-211ENST00000438265 DDR1Q08345 913 aa11.2□□□□□ -0.62
RPE-211ENST00000438265 SLC39A6Q13433 755 aa11.2□□□□□ -0.62
RPE-211ENST00000438265 PLEKHO1Q53GL0 409 aaPredicted RBP11.2□□□□□ -0.62
RPE-211ENST00000438265 BCORQ6W2J9 1755 aa11.19□□□□□ -0.62
RPE-211ENST00000438265 RPS6KA4O75676 772 aa11.19□□□□□ -0.62
RPE-211ENST00000438265 CRKLP46109 303 aaKnown RBP11.19□□□□□ -0.62
RPE-211ENST00000438265 MTHFSP49914 203 aa11.19□□□□□ -0.62
RPE-211ENST00000438265 CABP4P57796 275 aa11.19□□□□□ -0.62
RPE-211ENST00000438265 INTS5Q6P9B9 1019 aaKnown RBP11.19□□□□□ -0.62
RPE-211ENST00000438265 RTCBQ9Y3I0 505 aaKnown RBP11.19□□□□□ -0.62
RPE-211ENST00000438265 SCN7AQ01118 1682 aa11.19□□□□□ -0.62
RPE-211ENST00000438265 DICER1Q9UPY3 1922 aaKnown RBP11.18□□□□□ -0.62
RPE-211ENST00000438265 DPEP1P16444 411 aa11.18□□□□□ -0.62
RPE-211ENST00000438265 FKBP8Q14318 412 aa11.18□□□□□ -0.62
RPE-211ENST00000438265 TRAPPC3LQ5T215 181 aa11.18□□□□□ -0.62
RPE-211ENST00000438265 RC3H1Q5TC82 1133 aaKnown RBP11.18□□□□□ -0.62
RPE-211ENST00000438265 DNAJC10Q8IXB1 793 aa11.18□□□□□ -0.62
RPE-211ENST00000438265 TIAM2Q8IVF5 1701 aa11.18□□□□□ -0.62
RPE-211ENST00000438265 PCNTO95613 3336 aa11.17□□□□□ -0.62
RPE-211ENST00000438265 KIF3CO14782 793 aa11.17□□□□□ -0.62
RPE-211ENST00000438265 CC2D1BQ5T0F9 858 aaKnown RBP11.17□□□□□ -0.62
RPE-211ENST00000438265 FER1L6Q2WGJ9 1857 aa11.17□□□□□ -0.62
RPE-211ENST00000438265 USP42Q9H9J4 1324 aaKnown RBP11.16□□□□□ -0.62
RPE-211ENST00000438265 WDR90Q96KV7 1748 aa11.16□□□□□ -0.62
RPE-211ENST00000438265 RNMTO43148 476 aaKnown RBP11.16□□□□□ -0.62
RPE-211ENST00000438265 CNGB1Q14028 1251 aaPredicted RBP11.16□□□□□ -0.62
RPE-211ENST00000438265 MTHFSDQ2M296 383 aaKnown RBP11.16□□□□□ -0.62
RPE-211ENST00000438265 HSP90AB1P08238 724 aaKnown RBP11.15□□□□□ -0.62
RPE-211ENST00000438265 PRELPP51888 382 aa11.15□□□□□ -0.62
RPE-211ENST00000438265 AMOTQ4VCS5 1084 aa11.15□□□□□ -0.62
RPE-211ENST00000438265 BCL2L12Q9HB09 334 aa11.15□□□□□ -0.62
RPE-211ENST00000438265 BCS1LQ9Y276 419 aa11.15□□□□□ -0.62
RPE-211ENST00000438265 CARMIL3Q8ND23 1372 aa11.15□□□□□ -0.63
RPE-211ENST00000438265 SLX4Q8IY92 1834 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms