RNA–Protein interactions for RNA: ENST00000438204.6

RPE-210, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-210ENST00000438204 MAP3K19Q56UN5 1328 aa13.18□□□□□ -0.3
RPE-210ENST00000438204 FBLN1P23142 703 aa13.18□□□□□ -0.3
RPE-210ENST00000438204 HOXC9P31274 260 aa13.18□□□□□ -0.3
RPE-210ENST00000438204 CTCFP49711 727 aaPredicted RBP13.18□□□□□ -0.3
RPE-210ENST00000438204 LBX1P52954 281 aa13.18□□□□□ -0.3
RPE-210ENST00000438204 SMARCC1Q92922 1105 aaPredicted RBP13.18□□□□□ -0.3
RPE-210ENST00000438204 KDM6AO15550 1401 aaPredicted RBP13.18□□□□□ -0.3
RPE-210ENST00000438204 COL5A3P25940 1745 aaPredicted RBP13.18□□□□□ -0.3
RPE-210ENST00000438204 PCDH11XQ9BZA7 1347 aa13.17□□□□□ -0.3
RPE-210ENST00000438204 PCDH11YQ9BZA8 1340 aa13.17□□□□□ -0.3
RPE-210ENST00000438204 EDC4Q6P2E9 1401 aaKnown RBP13.17□□□□□ -0.3
RPE-210ENST00000438204 LOC102724428A0A0B4J2F2 783 aa13.17□□□□□ -0.3
RPE-210ENST00000438204 VEGFAP15692 232 aaPredicted RBP13.17□□□□□ -0.3
RPE-210ENST00000438204 SIK1P57059 783 aa13.17□□□□□ -0.3
RPE-210ENST00000438204 NBPF6Q5VWK0 638 aa13.17□□□□□ -0.3
RPE-210ENST00000438204 NBPF4Q96M43 638 aa13.17□□□□□ -0.3
RPE-210ENST00000438204 CNTNAP1P78357 1384 aa13.17□□□□□ -0.3
RPE-210ENST00000438204 DALRD3Q5D0E6 543 aaKnown RBP13.16□□□□□ -0.3
RPE-210ENST00000438204 PIGBQ92521 554 aa13.16□□□□□ -0.3
RPE-210ENST00000438204 AIDAQ96BJ3 306 aa13.16□□□□□ -0.3
RPE-210ENST00000438204 CREBZFQ9NS37 354 aa13.16□□□□□ -0.3
RPE-210ENST00000438204 PIM2Q9P1W9 311 aa13.16□□□□□ -0.3
RPE-210ENST00000438204 MYH14Q7Z406 1995 aaKnown RBP13.16□□□□□ -0.3
RPE-210ENST00000438204 CYP27B1O15528 508 aa13.15□□□□□ -0.3
RPE-210ENST00000438204 HMGB2P26583 209 aaKnown RBP13.15□□□□□ -0.3
RPE-210ENST00000438204 CHRNA5P30532 468 aa13.15□□□□□ -0.3
RPE-210ENST00000438204 TMF1P82094 1093 aa13.15□□□□□ -0.3
RPE-210ENST00000438204 RAPGEF4Q8WZA2 1011 aa13.15□□□□□ -0.3
RPE-210ENST00000438204 GLTPD2A6NH11 291 aa13.14□□□□□ -0.31
RPE-210ENST00000438204 CCDC85CA6NKD9 419 aa13.14□□□□□ -0.31
RPE-210ENST00000438204 POTECB2RU33 542 aa13.14□□□□□ -0.31
RPE-210ENST00000438204 TNRC18O15417 2968 aaPredicted RBP13.14□□□□□ -0.31
RPE-210ENST00000438204 AMPHP49418 695 aa13.14□□□□□ -0.31
RPE-210ENST00000438204 A0A1W2PP64 1363 aa13.14□□□□□ -0.31
RPE-210ENST00000438204 DLEC1Q9Y238 1755 aa13.14□□□□□ -0.31
RPE-210ENST00000438204 CGNL1Q0VF96 1302 aa13.13□□□□□ -0.31
RPE-210ENST00000438204 ZC3H4Q9UPT8 1303 aaKnown RBP13.13□□□□□ -0.31
RPE-210ENST00000438204 POTEIP0CG38 1075 aa13.13□□□□□ -0.31
RPE-210ENST00000438204 POTEJP0CG39 1038 aa13.13□□□□□ -0.31
RPE-210ENST00000438204 HSPA8P11142 646 aaKnown RBP13.13□□□□□ -0.31
RPE-210ENST00000438204 GYS1P13807 737 aa13.13□□□□□ -0.31
RPE-210ENST00000438204 TATP17735 454 aaPredicted RBP13.13□□□□□ -0.31
RPE-210ENST00000438204 PARP3Q9Y6F1 533 aa13.13□□□□□ -0.31
RPE-210ENST00000438204 DICER1Q9UPY3 1922 aaKnown RBP13.13□□□□□ -0.31
RPE-210ENST00000438204 ATP6V1AP38606 617 aa13.12□□□□□ -0.31
RPE-210ENST00000438204 NLGN1Q8N2Q7 840 aa13.12□□□□□ -0.31
RPE-210ENST00000438204 ASAP1Q9ULH1 1129 aa13.12□□□□□ -0.31
RPE-210ENST00000438204 AFDNP55196 1824 aaKnown RBP13.11□□□□□ -0.31
RPE-210ENST00000438204 KDRP35968 1356 aa13.11□□□□□ -0.31
RPE-210ENST00000438204 VEGFBP49765 207 aa13.11□□□□□ -0.31
RPE-210ENST00000438204 TMC1Q8TDI8 760 aa13.11□□□□□ -0.31
RPE-210ENST00000438204 RTL1A6NKG5 1358 aa13.1□□□□□ -0.31
RPE-210ENST00000438204 RGS19P49795 217 aa13.1□□□□□ -0.31
RPE-210ENST00000438204 DDR1Q08345 913 aa13.1□□□□□ -0.31
RPE-210ENST00000438204 TRAPPC3LQ5T215 181 aa13.1□□□□□ -0.31
RPE-210ENST00000438204 ARHGEF1Q92888 912 aaKnown RBP13.1□□□□□ -0.31
RPE-210ENST00000438204 SLC12A5Q9H2X9 1139 aa13.1□□□□□ -0.31
RPE-210ENST00000438204 WBP1LQ9NX94 342 aa13.1□□□□□ -0.31
RPE-210ENST00000438204 RTCBQ9Y3I0 505 aaKnown RBP13.1□□□□□ -0.31
RPE-210ENST00000438204 LMNB1P20700 586 aa13.09□□□□□ -0.31
RPE-210ENST00000438204 RRS1Q15050 365 aaKnown RBP13.09□□□□□ -0.31
RPE-210ENST00000438204 CHADLQ6NUI6 762 aa13.09□□□□□ -0.31
RPE-210ENST00000438204 HDGFL2Q7Z4V5 671 aaPredicted RBP13.09□□□□□ -0.31
RPE-210ENST00000438204 SMG6Q86US8 1419 aaKnown RBP13.09□□□□□ -0.31
RPE-210ENST00000438204 ZNF831Q5JPB2 1677 aa13.08□□□□□ -0.31
RPE-210ENST00000438204 SLC4A9Q96Q91 983 aa13.07□□□□□ -0.32
RPE-210ENST00000438204 TMOD3Q9NYL9 352 aa13.07□□□□□ -0.32
RPE-210ENST00000438204 SRP68Q9UHB9 627 aaKnown RBP13.07□□□□□ -0.32
RPE-210ENST00000438204 ROCK2O75116 1388 aaKnown RBP13.07□□□□□ -0.32
RPE-210ENST00000438204 THSD7BQ9C0I4 1608 aa13.06□□□□□ -0.32
RPE-210ENST00000438204 ADAMTS7Q9UKP4 1686 aa13.06□□□□□ -0.32
RPE-210ENST00000438204 RFC4P35249 363 aa13.06□□□□□ -0.32
RPE-210ENST00000438204 CFAP44Q96MT7 982 aa13.06□□□□□ -0.32
RPE-210ENST00000438204 ATG3Q9NT62 314 aa13.06□□□□□ -0.32
RPE-210ENST00000438204 PASKQ96RG2 1323 aa13.06□□□□□ -0.32
RPE-210ENST00000438204 NFKBIEO00221 500 aa13.05□□□□□ -0.32
RPE-210ENST00000438204 FKBP8Q14318 412 aa13.05□□□□□ -0.32
RPE-210ENST00000438204 COG3Q96JB2 828 aa13.05□□□□□ -0.32
RPE-210ENST00000438204 CACNA1SQ13698 1873 aa13.05□□□□□ -0.32
RPE-210ENST00000438204 FER1L6Q2WGJ9 1857 aa13.05□□□□□ -0.32
RPE-210ENST00000438204 NRXN2Q9P2S2 1712 aa13.04□□□□□ -0.32
RPE-210ENST00000438204 TJP1Q07157 1748 aa13.03□□□□□ -0.32
RPE-210ENST00000438204 LTBP1Q14766 1721 aa13.03□□□□□ -0.32
RPE-210ENST00000438204 NKX1-1Q15270 411 aaPredicted RBP13.03□□□□□ -0.32
RPE-210ENST00000438204 CNTNAP4Q9C0A0 1308 aa13.03□□□□□ -0.32
RPE-210ENST00000438204 CASP8AP2Q9UKL3 1982 aa13.03□□□□□ -0.32
RPE-210ENST00000438204 COL11A2P13942 1736 aaPredicted RBP13.02□□□□□ -0.32
RPE-210ENST00000438204 RPS6KA4O75676 772 aa13.02□□□□□ -0.33
RPE-210ENST00000438204 HSP90AB2PQ58FF8 381 aa13.02□□□□□ -0.33
RPE-210ENST00000438204 RBM42Q9BTD8 480 aaKnown RBP13.02□□□□□ -0.33
RPE-210ENST00000438204 TERF2IPQ9NYB0 399 aa13.02□□□□□ -0.33
RPE-210ENST00000438204 USP42Q9H9J4 1324 aaKnown RBP13.02□□□□□ -0.33
RPE-210ENST00000438204 SCN4AP35499 1836 aa13.02□□□□□ -0.33
RPE-210ENST00000438204 KIF20BQ96Q89 1820 aa13.02□□□□□ -0.33
RPE-210ENST00000438204 TMEM88BA6NKF7 163 aa13.01□□□□□ -0.33
RPE-210ENST00000438204 POLRMTO00411 1230 aaKnown RBP13.01□□□□□ -0.33
RPE-210ENST00000438204 INSRP06213 1382 aa13.01□□□□□ -0.33
RPE-210ENST00000438204 ADAMTSL1Q8N6G6 1762 aa13.01□□□□□ -0.33
RPE-210ENST00000438204 ANKRD31Q8N7Z5 1873 aa13.01□□□□□ -0.33
RPE-210ENST00000438204 NCAPD2Q15021 1401 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms