RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 ACDQ96AP0 544 aa7.99□□□□□ -1.13
HMGB1P31-201ENST00000437242 LOC100996750A0A140TA64 210 aa7.98□□□□□ -1.13
HMGB1P31-201ENST00000437242 A0A1B0GTH6 734 aa7.98□□□□□ -1.13
HMGB1P31-201ENST00000437242 PHKA2P46019 1235 aa7.98□□□□□ -1.13
HMGB1P31-201ENST00000437242 ESCO1Q5FWF5 840 aa7.98□□□□□ -1.13
HMGB1P31-201ENST00000437242 TMEM214Q6NUQ4 689 aaKnown RBP7.98□□□□□ -1.13
HMGB1P31-201ENST00000437242 KRTAP4-6Q9BYQ5 205 aa7.98□□□□□ -1.13
HMGB1P31-201ENST00000437242 DOLKQ9UPQ8 538 aa7.98□□□□□ -1.13
HMGB1P31-201ENST00000437242 XAGE2Q96GT9 111 aa7.97□□□□□ -1.13
HMGB1P31-201ENST00000437242 CSB-PGBD3P0DP91 1061 aa7.96□□□□□ -1.14
HMGB1P31-201ENST00000437242 MAP2K3P46734 347 aa7.96□□□□□ -1.14
HMGB1P31-201ENST00000437242 SLFNL1Q499Z3 407 aa7.96□□□□□ -1.14
HMGB1P31-201ENST00000437242 RNF135Q8IUD6 432 aa7.96□□□□□ -1.14
HMGB1P31-201ENST00000437242 PGBD3Q8N328 593 aa7.96□□□□□ -1.14
HMGB1P31-201ENST00000437242 BEND7Q8N7W2 519 aaPredicted RBP7.96□□□□□ -1.14
HMGB1P31-201ENST00000437242 CFHR5Q9BXR6 569 aa7.96□□□□□ -1.14
HMGB1P31-201ENST00000437242 FHDC1Q9C0D6 1143 aaPredicted RBP7.96□□□□□ -1.14
HMGB1P31-201ENST00000437242 PHF24Q9UPV7 400 aa7.96□□□□□ -1.14
HMGB1P31-201ENST00000437242 CNTNAP5Q8WYK1 1306 aa7.96□□□□□ -1.14
HMGB1P31-201ENST00000437242 OXCT2Q9BYC2 517 aaPredicted RBP7.95□□□□□ -1.14
HMGB1P31-201ENST00000437242 LRRC4BQ9NT99 713 aa7.95□□□□□ -1.14
HMGB1P31-201ENST00000437242 HRH3Q9Y5N1 445 aa7.95□□□□□ -1.14
HMGB1P31-201ENST00000437242 THBS1P07996 1170 aa7.94□□□□□ -1.14
HMGB1P31-201ENST00000437242 USP4Q13107 963 aa7.94□□□□□ -1.14
HMGB1P31-201ENST00000437242 LBRQ14739 615 aaKnown RBP7.94□□□□□ -1.14
HMGB1P31-201ENST00000437242 C4orf17Q53FE4 359 aa7.94□□□□□ -1.14
HMGB1P31-201ENST00000437242 OXLD1Q5BKU9 147 aa7.94□□□□□ -1.14
HMGB1P31-201ENST00000437242 OIP5O43482 229 aa7.93□□□□□ -1.14
HMGB1P31-201ENST00000437242 TLR1Q15399 786 aa7.93□□□□□ -1.14
HMGB1P31-201ENST00000437242 TPRNQ4KMQ1 711 aa7.93□□□□□ -1.14
HMGB1P31-201ENST00000437242 EFHC2Q5JST6 749 aa7.93□□□□□ -1.14
HMGB1P31-201ENST00000437242 RHBDD1Q8TEB9 315 aa7.93□□□□□ -1.14
HMGB1P31-201ENST00000437242 SIRT1Q96EB6 747 aa7.93□□□□□ -1.14
HMGB1P31-201ENST00000437242 RUBCNLQ9H714 662 aa7.93□□□□□ -1.14
HMGB1P31-201ENST00000437242 ETNK1Q9HBU6 452 aa7.93□□□□□ -1.14
HMGB1P31-201ENST00000437242 MSX1P28360 303 aa7.92□□□□□ -1.14
HMGB1P31-201ENST00000437242 IRF5Q13568 498 aa7.92□□□□□ -1.14
HMGB1P31-201ENST00000437242 DCAF5Q96JK2 942 aa7.92□□□□□ -1.14
HMGB1P31-201ENST00000437242 STAU1O95793 577 aaKnown RBP7.91□□□□□ -1.14
HMGB1P31-201ENST00000437242 VAC14Q08AM6 782 aa7.91□□□□□ -1.14
HMGB1P31-201ENST00000437242 TSGA10IPQ3SY00 556 aa7.91□□□□□ -1.14
HMGB1P31-201ENST00000437242 PHTF2Q8N3S3 785 aa7.91□□□□□ -1.14
HMGB1P31-201ENST00000437242 ATXN7L1Q9ULK2 861 aaPredicted RBP7.91□□□□□ -1.14
HMGB1P31-201ENST00000437242 PLA2G4EQ3MJ16 856 aa7.9□□□□□ -1.14
HMGB1P31-201ENST00000437242 TBC1D9Q6ZT07 1266 aa7.9□□□□□ -1.14
HMGB1P31-201ENST00000437242 PPARGC1BQ86YN6 1023 aaKnown RBP7.9□□□□□ -1.14
HMGB1P31-201ENST00000437242 KLRG1Q96E93 195 aa7.9□□□□□ -1.14
HMGB1P31-201ENST00000437242 GDF2Q9UK05 429 aaPredicted RBP7.9□□□□□ -1.14
HMGB1P31-201ENST00000437242 MSTNO14793 375 aa7.89□□□□□ -1.15
HMGB1P31-201ENST00000437242 BMP4P12644 408 aa7.89□□□□□ -1.15
HMGB1P31-201ENST00000437242 ABL2P42684 1182 aa7.89□□□□□ -1.15
HMGB1P31-201ENST00000437242 PLA2G4AP47712 749 aa7.89□□□□□ -1.15
HMGB1P31-201ENST00000437242 UBAP2LQ14157 1087 aaKnown RBP7.89□□□□□ -1.15
HMGB1P31-201ENST00000437242 ABHD17AQ96GS6 310 aa7.89□□□□□ -1.15
HMGB1P31-201ENST00000437242 SHISA8B8ZZ34 492 aa7.88□□□□□ -1.15
HMGB1P31-201ENST00000437242 GDF10P55107 478 aa7.88□□□□□ -1.15
HMGB1P31-201ENST00000437242 WASHC4Q2M389 1173 aa7.88□□□□□ -1.15
HMGB1P31-201ENST00000437242 GOLGA6L1Q8N7Z2 621 aa7.88□□□□□ -1.15
HMGB1P31-201ENST00000437242 GALNT6Q8NCL4 622 aa7.88□□□□□ -1.15
HMGB1P31-201ENST00000437242 GDPD2Q9HCC8 539 aa7.88□□□□□ -1.15
HMGB1P31-201ENST00000437242 CHIC2Q9UKJ5 165 aa7.88□□□□□ -1.15
HMGB1P31-201ENST00000437242 FGFR3P22607 806 aa7.87□□□□□ -1.15
HMGB1P31-201ENST00000437242 MAP7D1Q3KQU3 841 aa7.87□□□□□ -1.15
HMGB1P31-201ENST00000437242 CRISPLD1Q9H336 500 aa7.87□□□□□ -1.15
HMGB1P31-201ENST00000437242 RRAGCQ9HB90 399 aa7.87□□□□□ -1.15
HMGB1P31-201ENST00000437242 MKL2Q9ULH7 1088 aa7.87□□□□□ -1.15
HMGB1P31-201ENST00000437242 INHAP05111 366 aa7.86□□□□□ -1.15
HMGB1P31-201ENST00000437242 SCNN1DP51172 638 aa7.86□□□□□ -1.15
HMGB1P31-201ENST00000437242 SNRPNP63162 240 aaKnown RBP7.86□□□□□ -1.15
HMGB1P31-201ENST00000437242 FIGNL1Q6PIW4 674 aa7.86□□□□□ -1.15
HMGB1P31-201ENST00000437242 PLPP7Q8NBV4 271 aa7.86□□□□□ -1.15
HMGB1P31-201ENST00000437242 EDARADDQ8WWZ3 215 aa7.86□□□□□ -1.15
HMGB1P31-201ENST00000437242 SPOCK3Q9BQ16 436 aa7.86□□□□□ -1.15
HMGB1P31-201ENST00000437242 AMPD1P23109 780 aa7.85□□□□□ -1.15
HMGB1P31-201ENST00000437242 SEMA3FQ13275 785 aa7.85□□□□□ -1.15
HMGB1P31-201ENST00000437242 SLCO4C1Q6ZQN7 724 aa7.85□□□□□ -1.15
HMGB1P31-201ENST00000437242 C1orf229Q6ZS94 237 aaPredicted RBP7.85□□□□□ -1.15
HMGB1P31-201ENST00000437242 C1orf216Q8TAB5 229 aa7.85□□□□□ -1.15
HMGB1P31-201ENST00000437242 NIFKQ9BYG3 293 aaKnown RBP7.85□□□□□ -1.15
HMGB1P31-201ENST00000437242 NDFIP2Q9NV92 336 aa7.85□□□□□ -1.15
HMGB1P31-201ENST00000437242 BNIP3LO60238 219 aa7.84□□□□□ -1.15
HMGB1P31-201ENST00000437242 SOX11P35716 441 aa7.84□□□□□ -1.15
HMGB1P31-201ENST00000437242 AIDAQ96BJ3 306 aa7.84□□□□□ -1.15
HMGB1P31-201ENST00000437242 GGA1Q9UJY5 639 aa7.84□□□□□ -1.15
HMGB1P31-201ENST00000437242 C2CD2LO14523 706 aa7.83□□□□□ -1.16
HMGB1P31-201ENST00000437242 ITGB2P05107 769 aa7.83□□□□□ -1.16
HMGB1P31-201ENST00000437242 ATP4AP20648 1035 aa7.83□□□□□ -1.16
HMGB1P31-201ENST00000437242 SMTNP53814 917 aa7.83□□□□□ -1.16
HMGB1P31-201ENST00000437242 CTBSQ01459 385 aa7.83□□□□□ -1.16
HMGB1P31-201ENST00000437242 NBPF1Q3BBV0 1214 aa7.83□□□□□ -1.16
HMGB1P31-201ENST00000437242 SERTAD1Q9UHV2 236 aa7.83□□□□□ -1.16
HMGB1P31-201ENST00000437242 PROCP04070 461 aa7.82□□□□□ -1.16
HMGB1P31-201ENST00000437242 ALYREFQ86V81 257 aaKnown RBP7.82□□□□□ -1.16
HMGB1P31-201ENST00000437242 NLRP8Q86W28 1048 aa7.82□□□□□ -1.16
HMGB1P31-201ENST00000437242 ZCCHC2Q9C0B9 1178 aaKnown RBP7.82□□□□□ -1.16
HMGB1P31-201ENST00000437242 DNAAF2Q9NVR5 837 aaKnown RBP7.82□□□□□ -1.16
HMGB1P31-201ENST00000437242 PCDHGC4Q9Y5F7 938 aa7.82□□□□□ -1.16
HMGB1P31-201ENST00000437242 PIK3R2O00459 728 aa7.81□□□□□ -1.16
HMGB1P31-201ENST00000437242 ATXN7O15265 892 aaPredicted RBP7.81□□□□□ -1.16
HMGB1P31-201ENST00000437242 ARAFP10398 606 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms