RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 PCDHB3Q9Y5E6 796 aa8.56□□□□□ -1.04
ECHDC1-208ENST00000436638 KNDC1Q76NI1 1749 aa8.56□□□□□ -1.04
ECHDC1-208ENST00000436638 LTBP4Q8N2S1 1624 aa8.55□□□□□ -1.04
ECHDC1-208ENST00000436638 ITGBL1O95965 494 aaPredicted RBP8.55□□□□□ -1.04
ECHDC1-208ENST00000436638 CDK11BP21127 795 aaKnown RBP8.55□□□□□ -1.04
ECHDC1-208ENST00000436638 TTLL12Q14166 644 aaPredicted RBP8.55□□□□□ -1.04
ECHDC1-208ENST00000436638 TJAP1Q5JTD0 557 aa8.55□□□□□ -1.04
ECHDC1-208ENST00000436638 GPCPD1Q9NPB8 672 aa8.55□□□□□ -1.04
ECHDC1-208ENST00000436638 USP47Q96K76 1375 aa8.55□□□□□ -1.04
ECHDC1-208ENST00000436638 STRCP1A6NGW2 1772 aa8.55□□□□□ -1.04
ECHDC1-208ENST00000436638 PLEKHH1Q9ULM0 1364 aa8.54□□□□□ -1.04
ECHDC1-208ENST00000436638 ACTN4O43707 911 aaKnown RBP8.54□□□□□ -1.04
ECHDC1-208ENST00000436638 TOM1O60784 492 aa8.54□□□□□ -1.04
ECHDC1-208ENST00000436638 PDE4CQ08493 712 aa8.54□□□□□ -1.04
ECHDC1-208ENST00000436638 IL21Q9HBE4 155 aa8.54□□□□□ -1.04
ECHDC1-208ENST00000436638 ST20-MTHFSA0A0A6YYL1 179 aa8.53□□□□□ -1.04
ECHDC1-208ENST00000436638 TRIM66O15016 1216 aa8.53□□□□□ -1.04
ECHDC1-208ENST00000436638 HMGB1P09429 215 aaKnown RBP8.53□□□□□ -1.04
ECHDC1-208ENST00000436638 HSPA5P11021 654 aaKnown RBP8.53□□□□□ -1.04
ECHDC1-208ENST00000436638 HIRIP3Q9BW71 556 aaPredicted RBP8.53□□□□□ -1.04
ECHDC1-208ENST00000436638 ADGRL3Q9HAR2 1447 aa8.53□□□□□ -1.04
ECHDC1-208ENST00000436638 EVC2Q86UK5 1308 aa8.53□□□□□ -1.04
ECHDC1-208ENST00000436638 IQSEC2Q5JU85 1478 aa8.52□□□□□ -1.05
ECHDC1-208ENST00000436638 ARHGEF28Q8N1W1 1705 aaKnown RBP8.52□□□□□ -1.05
ECHDC1-208ENST00000436638 UBAP1LF5GYI3 381 aa8.52□□□□□ -1.05
ECHDC1-208ENST00000436638 GCGRP47871 477 aa8.52□□□□□ -1.05
ECHDC1-208ENST00000436638 SRPK2P78362 688 aaKnown RBP8.52□□□□□ -1.05
ECHDC1-208ENST00000436638 TMF1P82094 1093 aa8.52□□□□□ -1.05
ECHDC1-208ENST00000436638 BLOC1S3Q6QNY0 202 aa8.52□□□□□ -1.05
ECHDC1-208ENST00000436638 ZNF516Q92618 1163 aa8.52□□□□□ -1.05
ECHDC1-208ENST00000436638 WASLO00401 505 aaPredicted RBP8.51□□□□□ -1.05
ECHDC1-208ENST00000436638 BRD2P25440 801 aaKnown RBP8.51□□□□□ -1.05
ECHDC1-208ENST00000436638 CDCA8Q53HL2 280 aa8.51□□□□□ -1.05
ECHDC1-208ENST00000436638 IFFO2Q5TF58 517 aa8.51□□□□□ -1.05
ECHDC1-208ENST00000436638 REPIN1Q9BWE0 567 aaKnown RBP8.51□□□□□ -1.05
ECHDC1-208ENST00000436638 CHMP4AQ9BY43 222 aa8.51□□□□□ -1.05
ECHDC1-208ENST00000436638 DCCP43146 1447 aa8.51□□□□□ -1.05
ECHDC1-208ENST00000436638 CD46P15529 392 aa8.5□□□□□ -1.05
ECHDC1-208ENST00000436638 AMHR2Q16671 573 aa8.5□□□□□ -1.05
ECHDC1-208ENST00000436638 PUS10Q3MIT2 529 aaKnown RBP8.5□□□□□ -1.05
ECHDC1-208ENST00000436638 TAF7LQ5H9L4 462 aa8.5□□□□□ -1.05
ECHDC1-208ENST00000436638 CDK19Q9BWU1 502 aa8.5□□□□□ -1.05
ECHDC1-208ENST00000436638 FAM217BQ9NTX9 383 aaPredicted RBP8.5□□□□□ -1.05
ECHDC1-208ENST00000436638 QRICH2Q9H0J4 1663 aa8.49□□□□□ -1.05
ECHDC1-208ENST00000436638 SSTR3P32745 418 aaPredicted RBP8.49□□□□□ -1.05
ECHDC1-208ENST00000436638 PIP4K2BP78356 416 aa8.49□□□□□ -1.05
ECHDC1-208ENST00000436638 FUT2Q10981 343 aa8.49□□□□□ -1.05
ECHDC1-208ENST00000436638 POLR3GLQ9BT43 218 aa8.49□□□□□ -1.05
ECHDC1-208ENST00000436638 TMUB1Q9BVT8 246 aa8.49□□□□□ -1.05
ECHDC1-208ENST00000436638 SLAIN2Q9P270 581 aa8.49□□□□□ -1.05
ECHDC1-208ENST00000436638 NALCNQ8IZF0 1738 aa8.49□□□□□ -1.05
ECHDC1-208ENST00000436638 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.49□□□□□ -1.05
ECHDC1-208ENST00000436638 SBNO2Q9Y2G9 1366 aa8.48□□□□□ -1.05
ECHDC1-208ENST00000436638 CDC42BPGQ6DT37 1551 aa8.48□□□□□ -1.05
ECHDC1-208ENST00000436638 ZPR1O75312 459 aa8.48□□□□□ -1.05
ECHDC1-208ENST00000436638 ESCO1Q5FWF5 840 aa8.48□□□□□ -1.05
ECHDC1-208ENST00000436638 ADGRB2O60241 1585 aa8.48□□□□□ -1.05
ECHDC1-208ENST00000436638 XIRP1Q702N8 1843 aaKnown RBP8.47□□□□□ -1.05
ECHDC1-208ENST00000436638 ANKARQ7Z5J8 1434 aa8.47□□□□□ -1.05
ECHDC1-208ENST00000436638 NR1I2O75469 434 aa8.47□□□□□ -1.05
ECHDC1-208ENST00000436638 ATP6V1AP38606 617 aa8.47□□□□□ -1.05
ECHDC1-208ENST00000436638 PDE4DQ08499 809 aa8.47□□□□□ -1.05
ECHDC1-208ENST00000436638 GIGYF2Q6Y7W6 1299 aaKnown RBP8.47□□□□□ -1.05
ECHDC1-208ENST00000436638 NKX2-3Q8TAU0 364 aa8.47□□□□□ -1.05
ECHDC1-208ENST00000436638 TMC1Q8TDI8 760 aa8.47□□□□□ -1.05
ECHDC1-208ENST00000436638 NUDT16Q96DE0 195 aaKnown RBP8.47□□□□□ -1.05
ECHDC1-208ENST00000436638 PKNOX2Q96KN3 472 aa8.47□□□□□ -1.05
ECHDC1-208ENST00000436638 TESK2Q96S53 571 aa8.47□□□□□ -1.05
ECHDC1-208ENST00000436638 ATAD2Q6PL18 1390 aa8.47□□□□□ -1.05
ECHDC1-208ENST00000436638 C1orf167Q5SNV9 1468 aa8.46□□□□□ -1.05
ECHDC1-208ENST00000436638 TULP4Q9NRJ4 1543 aa8.46□□□□□ -1.05
ECHDC1-208ENST00000436638 A0A0G2JS52 829 aa8.46□□□□□ -1.06
ECHDC1-208ENST00000436638 KDM4AO75164 1064 aa8.46□□□□□ -1.06
ECHDC1-208ENST00000436638 GRIPAP1Q4V328 841 aa8.46□□□□□ -1.06
ECHDC1-208ENST00000436638 SCUBE3Q8IX30 993 aa8.46□□□□□ -1.06
ECHDC1-208ENST00000436638 PARP9Q8IXQ6 854 aa8.46□□□□□ -1.06
ECHDC1-208ENST00000436638 NGDNQ8NEJ9 315 aaKnown RBP8.46□□□□□ -1.06
ECHDC1-208ENST00000436638 PUS7Q96PZ0 661 aaKnown RBP8.46□□□□□ -1.06
ECHDC1-208ENST00000436638 MST1RQ04912 1400 aa8.46□□□□□ -1.06
ECHDC1-208ENST00000436638 NUTM1Q86Y26 1132 aa8.45□□□□□ -1.06
ECHDC1-208ENST00000436638 PMFBP1Q8TBY8 1022 aa8.45□□□□□ -1.06
ECHDC1-208ENST00000436638 ORAI2Q96SN7 254 aa8.45□□□□□ -1.06
ECHDC1-208ENST00000436638 FMN2Q9NZ56 1722 aa8.45□□□□□ -1.06
ECHDC1-208ENST00000436638 PSME1Q06323 249 aa8.44□□□□□ -1.06
ECHDC1-208ENST00000436638 MORN1Q5T089 497 aa8.44□□□□□ -1.06
ECHDC1-208ENST00000436638 HDGFL2Q7Z4V5 671 aaPredicted RBP8.44□□□□□ -1.06
ECHDC1-208ENST00000436638 FBXO41Q8TF61 875 aa8.44□□□□□ -1.06
ECHDC1-208ENST00000436638 PRR36Q9H6K5 1346 aa8.44□□□□□ -1.06
ECHDC1-208ENST00000436638 DISP3Q9P2K9 1392 aa8.44□□□□□ -1.06
ECHDC1-208ENST00000436638 TLL1O43897 1013 aa8.43□□□□□ -1.06
ECHDC1-208ENST00000436638 HSP90B1P14625 803 aaKnown RBP8.43□□□□□ -1.06
ECHDC1-208ENST00000436638 BRINP3Q76B58 766 aa8.43□□□□□ -1.06
ECHDC1-208ENST00000436638 TERF2IPQ9NYB0 399 aa8.43□□□□□ -1.06
ECHDC1-208ENST00000436638 CABP1Q9NZU7 370 aa8.43□□□□□ -1.06
ECHDC1-208ENST00000436638 SLC27A5Q9Y2P5 690 aa8.43□□□□□ -1.06
ECHDC1-208ENST00000436638 NPHP3Q7Z494 1330 aa8.43□□□□□ -1.06
ECHDC1-208ENST00000436638 NINLQ9Y2I6 1382 aa8.43□□□□□ -1.06
ECHDC1-208ENST00000436638 PPIP5K1Q6PFW1 1433 aa8.43□□□□□ -1.06
ECHDC1-208ENST00000436638 PLEKHG3A1L390 1219 aa8.42□□□□□ -1.06
ECHDC1-208ENST00000436638 FOXO3O43524 673 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms