RNA–Protein interactions for RNA: ENST00000435953.2

AC004448.3-201, humanhuman

TSL 2 BASIC

Gene AC004448.3, Length 543 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004448.3-201ENST00000435953 TMOD3Q9NYL9 352 aa12.79□□□□□ -0.36
AC004448.3-201ENST00000435953 GLI3P10071 1580 aa12.78□□□□□ -0.36
AC004448.3-201ENST00000435953 VAMP4O75379 141 aa12.78□□□□□ -0.36
AC004448.3-201ENST00000435953 CT47B1P0C2W7 299 aaPredicted RBP12.78□□□□□ -0.36
AC004448.3-201ENST00000435953 EIF4A1P60842 406 aaKnown RBP12.78□□□□□ -0.36
AC004448.3-201ENST00000435953 SLC39A6Q13433 755 aa12.78□□□□□ -0.36
AC004448.3-201ENST00000435953 ZNF790Q6PG37 636 aa12.78□□□□□ -0.36
AC004448.3-201ENST00000435953 KRT27Q7Z3Y8 459 aa12.78□□□□□ -0.36
AC004448.3-201ENST00000435953 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.78□□□□□ -0.36
AC004448.3-201ENST00000435953 ELL2O00472 640 aaPredicted RBP12.77□□□□□ -0.37
AC004448.3-201ENST00000435953 FAM182BQ5T319 152 aa12.77□□□□□ -0.37
AC004448.3-201ENST00000435953 TSPYL6Q8N831 410 aa12.77□□□□□ -0.37
AC004448.3-201ENST00000435953 SYTL4Q96C24 671 aaPredicted RBP12.77□□□□□ -0.37
AC004448.3-201ENST00000435953 ACSBG1Q96GR2 724 aa12.77□□□□□ -0.37
AC004448.3-201ENST00000435953 RCAN3Q9UKA8 241 aa12.77□□□□□ -0.37
AC004448.3-201ENST00000435953 PARP4Q9UKK3 1724 aaKnown RBP12.76□□□□□ -0.37
AC004448.3-201ENST00000435953 KRT24Q2M2I5 525 aa12.76□□□□□ -0.37
AC004448.3-201ENST00000435953 TWISTNBQ3B726 338 aaPredicted RBP12.76□□□□□ -0.37
AC004448.3-201ENST00000435953 ATG3Q9NT62 314 aa12.76□□□□□ -0.37
AC004448.3-201ENST00000435953 PKD1L3Q7Z443 1732 aa12.76□□□□□ -0.37
AC004448.3-201ENST00000435953 KCNQ2O43526 872 aa12.75□□□□□ -0.37
AC004448.3-201ENST00000435953 FAM196AQ6ZSG2 479 aa12.75□□□□□ -0.37
AC004448.3-201ENST00000435953 TTC5Q8N0Z6 440 aa12.75□□□□□ -0.37
AC004448.3-201ENST00000435953 ZNF428Q96B54 188 aa12.75□□□□□ -0.37
AC004448.3-201ENST00000435953 ASAP1Q9ULH1 1129 aa12.75□□□□□ -0.37
AC004448.3-201ENST00000435953 GIGYF1O75420 1035 aaPredicted RBP12.74□□□□□ -0.37
AC004448.3-201ENST00000435953 RARSP54136 660 aaKnown RBP12.74□□□□□ -0.37
AC004448.3-201ENST00000435953 ZNF496Q96IT1 587 aaPredicted RBP12.74□□□□□ -0.37
AC004448.3-201ENST00000435953 FMNL2Q96PY5 1086 aa12.74□□□□□ -0.37
AC004448.3-201ENST00000435953 BCL9O00512 1426 aa12.73□□□□□ -0.37
AC004448.3-201ENST00000435953 SOS1Q07889 1333 aaPredicted RBP12.73□□□□□ -0.37
AC004448.3-201ENST00000435953 CHMP4AQ9BY43 222 aa12.73□□□□□ -0.37
AC004448.3-201ENST00000435953 SUPT16HQ9Y5B9 1047 aaKnown RBP12.73□□□□□ -0.37
AC004448.3-201ENST00000435953 HEG1Q9ULI3 1381 aa12.72□□□□□ -0.37
AC004448.3-201ENST00000435953 PTCD1O75127 700 aaKnown RBP12.72□□□□□ -0.37
AC004448.3-201ENST00000435953 HOXB7P09629 217 aa12.72□□□□□ -0.37
AC004448.3-201ENST00000435953 SNRPA1P09661 255 aaKnown RBP12.72□□□□□ -0.37
AC004448.3-201ENST00000435953 ALDH1L2Q3SY69 923 aa12.72□□□□□ -0.37
AC004448.3-201ENST00000435953 SSH1Q8WYL5 1049 aa12.72□□□□□ -0.37
AC004448.3-201ENST00000435953 THSD7AQ9UPZ6 1657 aa12.72□□□□□ -0.37
AC004448.3-201ENST00000435953 DLG5Q8TDM6 1919 aa12.72□□□□□ -0.37
AC004448.3-201ENST00000435953 ADAMTS7Q9UKP4 1686 aa12.71□□□□□ -0.37
AC004448.3-201ENST00000435953 BCAR3O75815 825 aa12.71□□□□□ -0.37
AC004448.3-201ENST00000435953 PTF1AQ7RTS3 328 aa12.71□□□□□ -0.37
AC004448.3-201ENST00000435953 SMARCC1Q92922 1105 aaPredicted RBP12.71□□□□□ -0.37
AC004448.3-201ENST00000435953 BCL11BQ9C0K0 894 aaPredicted RBP12.71□□□□□ -0.37
AC004448.3-201ENST00000435953 MRC1P22897 1456 aa12.71□□□□□ -0.38
AC004448.3-201ENST00000435953 EIF2S2P20042 333 aaKnown RBP12.7□□□□□ -0.38
AC004448.3-201ENST00000435953 CCDC30Q5VVM6 783 aa12.7□□□□□ -0.38
AC004448.3-201ENST00000435953 VSIG10Q8N0Z9 540 aa12.7□□□□□ -0.38
AC004448.3-201ENST00000435953 LRRC37A3O60309 1634 aa12.7□□□□□ -0.38
AC004448.3-201ENST00000435953 PRAMEF22A3QJZ6 481 aa12.69□□□□□ -0.38
AC004448.3-201ENST00000435953 TCERG1O14776 1098 aaKnown RBP12.69□□□□□ -0.38
AC004448.3-201ENST00000435953 BRPF1P55201 1214 aaPredicted RBP12.69□□□□□ -0.38
AC004448.3-201ENST00000435953 HDGFL1Q5TGJ6 251 aa12.69□□□□□ -0.38
AC004448.3-201ENST00000435953 MRPL50Q8N5N7 158 aaKnown RBP12.69□□□□□ -0.38
AC004448.3-201ENST00000435953 RBM42Q9BTD8 480 aaKnown RBP12.69□□□□□ -0.38
AC004448.3-201ENST00000435953 TEX13AQ9BXU3 409 aaPredicted RBP12.69□□□□□ -0.38
AC004448.3-201ENST00000435953 USP16Q9Y5T5 823 aa12.69□□□□□ -0.38
AC004448.3-201ENST00000435953 SHANK3Q9BYB0 1731 aa12.68□□□□□ -0.38
AC004448.3-201ENST00000435953 RNF123Q5XPI4 1314 aa12.68□□□□□ -0.38
AC004448.3-201ENST00000435953 SLC4A2P04920 1241 aa12.68□□□□□ -0.38
AC004448.3-201ENST00000435953 NECTIN2Q92692 538 aa12.68□□□□□ -0.38
AC004448.3-201ENST00000435953 SLC4A9Q96Q91 983 aa12.68□□□□□ -0.38
AC004448.3-201ENST00000435953 SMC4Q9NTJ3 1288 aa12.68□□□□□ -0.38
AC004448.3-201ENST00000435953 TRIM37O94972 964 aa12.67□□□□□ -0.38
AC004448.3-201ENST00000435953 BCL2L13Q9BXK5 485 aa12.67□□□□□ -0.38
AC004448.3-201ENST00000435953 STK31Q9BXU1 1019 aa12.67□□□□□ -0.38
AC004448.3-201ENST00000435953 RGS12O14924 1447 aa12.67□□□□□ -0.38
AC004448.3-201ENST00000435953 LOC102724428A0A0B4J2F2 783 aa12.66□□□□□ -0.38
AC004448.3-201ENST00000435953 RRP1P56182 461 aaKnown RBP12.66□□□□□ -0.38
AC004448.3-201ENST00000435953 SIK1P57059 783 aa12.66□□□□□ -0.38
AC004448.3-201ENST00000435953 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.66□□□□□ -0.38
AC004448.3-201ENST00000435953 DBF4Q9UBU7 674 aaPredicted RBP12.66□□□□□ -0.38
AC004448.3-201ENST00000435953 NOB1Q9ULX3 412 aaKnown RBP12.66□□□□□ -0.38
AC004448.3-201ENST00000435953 SCN11AQ9UI33 1791 aa12.66□□□□□ -0.38
AC004448.3-201ENST00000435953 WNK3Q9BYP7 1800 aa12.65□□□□□ -0.38
AC004448.3-201ENST00000435953 IPO8O15397 1037 aaKnown RBP12.65□□□□□ -0.38
AC004448.3-201ENST00000435953 PLIN1O60240 522 aa12.65□□□□□ -0.38
AC004448.3-201ENST00000435953 STARD3NLO95772 234 aa12.65□□□□□ -0.38
AC004448.3-201ENST00000435953 DNAJC10Q8IXB1 793 aa12.65□□□□□ -0.38
AC004448.3-201ENST00000435953 FRAT1Q92837 279 aaPredicted RBP12.65□□□□□ -0.38
AC004448.3-201ENST00000435953 ATP6V1AP38606 617 aa12.64□□□□□ -0.39
AC004448.3-201ENST00000435953 PDIA6Q15084 440 aa12.64□□□□□ -0.39
AC004448.3-201ENST00000435953 ARHGAP45Q92619 1136 aa12.64□□□□□ -0.39
AC004448.3-201ENST00000435953 DDX21Q9NR30 783 aaKnown RBP eCLIP12.64□□□□□ -0.39
AC004448.3-201ENST00000435953 CHPF2Q9P2E5 772 aa12.64□□□□□ -0.39
AC004448.3-201ENST00000435953 PALLDQ8WX93 1383 aa12.64□□□□□ -0.39
AC004448.3-201ENST00000435953 A1BGP04217 495 aa12.63□□□□□ -0.39
AC004448.3-201ENST00000435953 CYP19A1P11511 503 aaPredicted RBP12.63□□□□□ -0.39
AC004448.3-201ENST00000435953 ZKSCAN2Q63HK3 967 aa12.63□□□□□ -0.39
AC004448.3-201ENST00000435953 G2E3Q7L622 706 aa12.63□□□□□ -0.39
AC004448.3-201ENST00000435953 HYPKQ9NX55 129 aa12.63□□□□□ -0.39
AC004448.3-201ENST00000435953 APBA3O96018 575 aa12.62□□□□□ -0.39
AC004448.3-201ENST00000435953 CANXP27824 592 aaKnown RBP12.62□□□□□ -0.39
AC004448.3-201ENST00000435953 ITPK1Q13572 414 aa12.62□□□□□ -0.39
AC004448.3-201ENST00000435953 PROSER3Q2NL68 480 aa12.62□□□□□ -0.39
AC004448.3-201ENST00000435953 TOGARAM1Q9Y4F4 1720 aa12.62□□□□□ -0.39
AC004448.3-201ENST00000435953 KCPQ6ZWJ8 1503 aa12.62□□□□□ -0.39
AC004448.3-201ENST00000435953 ERBB4Q15303 1308 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms