RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 RNMTO43148 476 aaKnown RBP21.7■■□□□ 1.06
SMPD4-207ENST00000435455 PDGFDQ9GZP0 370 aaPredicted RBP21.7■■□□□ 1.06
SMPD4-207ENST00000435455 ZNF831Q5JPB2 1677 aa21.69■■□□□ 1.06
SMPD4-207ENST00000435455 NFATC2IPQ8NCF5 419 aa21.69■■□□□ 1.06
SMPD4-207ENST00000435455 MYBBP1AQ9BQG0 1328 aaKnown RBP21.69■■□□□ 1.06
SMPD4-207ENST00000435455 MRC1P22897 1456 aa21.69■■□□□ 1.06
SMPD4-207ENST00000435455 SLC52A2Q9HAB3 445 aa21.68■■□□□ 1.06
SMPD4-207ENST00000435455 LGR6Q9HBX8 967 aa21.68■■□□□ 1.06
SMPD4-207ENST00000435455 MAP3K5Q99683 1374 aa21.68■■□□□ 1.06
SMPD4-207ENST00000435455 C4BP0C0L5 1744 aa21.68■■□□□ 1.06
SMPD4-207ENST00000435455 ZNF316A6NFI3 1004 aaPredicted RBP21.67■■□□□ 1.06
SMPD4-207ENST00000435455 GNAT3A8MTJ3 354 aa21.67■■□□□ 1.06
SMPD4-207ENST00000435455 ZBTB7AO95365 584 aa21.67■■□□□ 1.06
SMPD4-207ENST00000435455 MTFR1LQ9H019 292 aa21.67■■□□□ 1.06
SMPD4-207ENST00000435455 SLC16A10Q8TF71 515 aa21.66■■□□□ 1.06
SMPD4-207ENST00000435455 PHACTR3Q96KR7 559 aa21.66■■□□□ 1.06
SMPD4-207ENST00000435455 PNPLA7Q6ZV29 1317 aa21.65■■□□□ 1.06
SMPD4-207ENST00000435455 ATP6V1AP38606 617 aa21.65■■□□□ 1.06
SMPD4-207ENST00000435455 RBM42Q9BTD8 480 aaKnown RBP21.65■■□□□ 1.06
SMPD4-207ENST00000435455 NEFMP07197 916 aa21.64■■□□□ 1.05
SMPD4-207ENST00000435455 FLAD1Q8NFF5 587 aa21.64■■□□□ 1.05
SMPD4-207ENST00000435455 AK7Q96M32 723 aa21.64■■□□□ 1.05
SMPD4-207ENST00000435455 PRKRIP1Q9H875 184 aaPredicted RBP21.63■■□□□ 1.05
SMPD4-207ENST00000435455 PPP1R1BQ9UD71 204 aaPredicted RBP21.63■■□□□ 1.05
SMPD4-207ENST00000435455 ATF5Q9Y2D1 282 aaPredicted RBP21.63■■□□□ 1.05
SMPD4-207ENST00000435455 UBR3Q6ZT12 1888 aa21.62■■□□□ 1.05
SMPD4-207ENST00000435455 ITPK1Q13572 414 aa21.62■■□□□ 1.05
SMPD4-207ENST00000435455 LINC00116Q8NCU8 138 aa21.62■■□□□ 1.05
SMPD4-207ENST00000435455 PNNQ9H307 717 aaKnown RBP21.62■■□□□ 1.05
SMPD4-207ENST00000435455 PTCD1O75127 700 aaKnown RBP21.61■■□□□ 1.05
SMPD4-207ENST00000435455 TEFQ10587 303 aa21.61■■□□□ 1.05
SMPD4-207ENST00000435455 IL17REQ8NFR9 667 aa21.6■■□□□ 1.05
SMPD4-207ENST00000435455 SLC4A9Q96Q91 983 aa21.6■■□□□ 1.05
SMPD4-207ENST00000435455 COL5A3P25940 1745 aaPredicted RBP21.6■■□□□ 1.05
SMPD4-207ENST00000435455 CICQ96RK0 1608 aaPredicted RBP21.59■■□□□ 1.05
SMPD4-207ENST00000435455 SIPA1L3O60292 1781 aaPredicted RBP21.59■■□□□ 1.05
SMPD4-207ENST00000435455 MSH5O43196 834 aa21.59■■□□□ 1.05
SMPD4-207ENST00000435455 PTGER2P43116 358 aa21.59■■□□□ 1.05
SMPD4-207ENST00000435455 CEMIPQ8WUJ3 1361 aa21.59■■□□□ 1.05
SMPD4-207ENST00000435455 COL23A1Q86Y22 540 aaPredicted RBP21.58■■□□□ 1.05
SMPD4-207ENST00000435455 RTF1Q92541 710 aaKnown RBP21.58■■□□□ 1.05
SMPD4-207ENST00000435455 COL24A1Q17RW2 1714 aa21.58■■□□□ 1.04
SMPD4-207ENST00000435455 HTATSF1O43719 755 aaKnown RBP21.57■■□□□ 1.04
SMPD4-207ENST00000435455 SSFA2P28290 1259 aa21.57■■□□□ 1.04
SMPD4-207ENST00000435455 RC3H1Q5TC82 1133 aaKnown RBP21.57■■□□□ 1.04
SMPD4-207ENST00000435455 TJP1Q07157 1748 aa21.56■■□□□ 1.04
SMPD4-207ENST00000435455 GNPATO15228 680 aa21.56■■□□□ 1.04
SMPD4-207ENST00000435455 SLC39A6Q13433 755 aa21.56■■□□□ 1.04
SMPD4-207ENST00000435455 PLEKHF1Q96S99 279 aa21.56■■□□□ 1.04
SMPD4-207ENST00000435455 SGIP1Q9BQI5 828 aa21.56■■□□□ 1.04
SMPD4-207ENST00000435455 UBR2Q8IWV8 1755 aa21.56■■□□□ 1.04
SMPD4-207ENST00000435455 CNTNAP4Q9C0A0 1308 aa21.55■■□□□ 1.04
SMPD4-207ENST00000435455 MAPK8IP3Q9UPT6 1336 aa21.55■■□□□ 1.04
SMPD4-207ENST00000435455 DLG5Q8TDM6 1919 aa21.55■■□□□ 1.04
SMPD4-207ENST00000435455 TTC5Q8N0Z6 440 aa21.55■■□□□ 1.04
SMPD4-207ENST00000435455 KCPQ6ZWJ8 1503 aa21.55■■□□□ 1.04
SMPD4-207ENST00000435455 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.54■■□□□ 1.04
SMPD4-207ENST00000435455 POLD1P28340 1107 aa21.54■■□□□ 1.04
SMPD4-207ENST00000435455 MYH14Q7Z406 1995 aaKnown RBP21.54■■□□□ 1.04
SMPD4-207ENST00000435455 PHF14O94880 888 aa21.53■■□□□ 1.04
SMPD4-207ENST00000435455 WDR43Q15061 677 aaKnown RBP eCLIP21.53■■□□□ 1.04
SMPD4-207ENST00000435455 NFE2L2Q16236 605 aa21.53■■□□□ 1.04
SMPD4-207ENST00000435455 VSIG10Q8N0Z9 540 aa21.53■■□□□ 1.04
SMPD4-207ENST00000435455 RTCBQ9Y3I0 505 aaKnown RBP21.53■■□□□ 1.04
SMPD4-207ENST00000435455 AMIGO3Q86WK7 504 aa21.52■■□□□ 1.04
SMPD4-207ENST00000435455 ARXQ96QS3 562 aa21.52■■□□□ 1.04
SMPD4-207ENST00000435455 ADRA2BP18089 450 aa21.51■■□□□ 1.03
SMPD4-207ENST00000435455 CRKLP46109 303 aaKnown RBP21.51■■□□□ 1.03
SMPD4-207ENST00000435455 ZNF790Q6PG37 636 aa21.51■■□□□ 1.03
SMPD4-207ENST00000435455 MCM10Q7L590 875 aa21.51■■□□□ 1.03
SMPD4-207ENST00000435455 RPS6KA4O75676 772 aa21.5■■□□□ 1.03
SMPD4-207ENST00000435455 BTBD11A6QL63 1104 aa21.49■■□□□ 1.03
SMPD4-207ENST00000435455 DNAJC10Q8IXB1 793 aa21.49■■□□□ 1.03
SMPD4-207ENST00000435455 DCTN1Q14203 1278 aa21.48■■□□□ 1.03
SMPD4-207ENST00000435455 TRAPPC3LQ5T215 181 aa21.48■■□□□ 1.03
SMPD4-207ENST00000435455 MSL1Q68DK7 614 aa21.48■■□□□ 1.03
SMPD4-207ENST00000435455 SMIM5Q71RC9 77 aa21.48■■□□□ 1.03
SMPD4-207ENST00000435455 FMNL2Q96PY5 1086 aa21.47■■□□□ 1.03
SMPD4-207ENST00000435455 CCDC87Q9NVE4 849 aa21.47■■□□□ 1.03
SMPD4-207ENST00000435455 HEG1Q9ULI3 1381 aa21.47■■□□□ 1.03
SMPD4-207ENST00000435455 CYP19A1P11511 503 aaPredicted RBP21.46■■□□□ 1.03
SMPD4-207ENST00000435455 ZNF496Q96IT1 587 aaPredicted RBP21.46■■□□□ 1.03
SMPD4-207ENST00000435455 TEX13AQ9BXU3 409 aaPredicted RBP21.46■■□□□ 1.03
SMPD4-207ENST00000435455 TAF7Q15545 349 aaPredicted RBP21.45■■□□□ 1.02
SMPD4-207ENST00000435455 INTS5Q6P9B9 1019 aaKnown RBP21.45■■□□□ 1.02
SMPD4-207ENST00000435455 FHDC1Q9C0D6 1143 aaPredicted RBP21.45■■□□□ 1.02
SMPD4-207ENST00000435455 C4AP0C0L4 1744 aa21.44■■□□□ 1.02
SMPD4-207ENST00000435455 ANP32CO43423 234 aa21.44■■□□□ 1.02
SMPD4-207ENST00000435455 STARD3NLO95772 234 aa21.44■■□□□ 1.02
SMPD4-207ENST00000435455 ARHGEF1Q92888 912 aaKnown RBP21.44■■□□□ 1.02
SMPD4-207ENST00000435455 RUNDC1Q96C34 613 aa21.44■■□□□ 1.02
SMPD4-207ENST00000435455 ADAMTS8Q9UP79 889 aa21.44■■□□□ 1.02
SMPD4-207ENST00000435455 RFC4P35249 363 aa21.43■■□□□ 1.02
SMPD4-207ENST00000435455 LMOD3Q0VAK6 560 aa21.43■■□□□ 1.02
SMPD4-207ENST00000435455 TMPOP42166 694 aaKnown RBP21.42■■□□□ 1.02
SMPD4-207ENST00000435455 RIPK4P57078 832 aa21.42■■□□□ 1.02
SMPD4-207ENST00000435455 CCDC146Q8IYE0 955 aa21.42■■□□□ 1.02
SMPD4-207ENST00000435455 PNISRQ8TF01 805 aaKnown RBP21.42■■□□□ 1.02
SMPD4-207ENST00000435455 SYT17Q9BSW7 474 aa21.42■■□□□ 1.02
SMPD4-207ENST00000435455 KCNQ3O43525 872 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms