RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 RIOK3O14730 519 aaKnown RBP8.91□□□□□ -0.98
SYNPO2-203ENST00000434046 NCOA3Q9Y6Q9 1424 aa8.9□□□□□ -0.98
SYNPO2-203ENST00000434046 TMX3Q96JJ7 454 aa8.9□□□□□ -0.98
SYNPO2-203ENST00000434046 C16orf45Q96MC5 204 aaPredicted RBP8.9□□□□□ -0.98
SYNPO2-203ENST00000434046 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.9□□□□□ -0.98
SYNPO2-203ENST00000434046 ERC2O15083 957 aa8.9□□□□□ -0.98
SYNPO2-203ENST00000434046 TNNT3P45378 269 aaPredicted RBP8.9□□□□□ -0.98
SYNPO2-203ENST00000434046 FAM184AQ8NB25 1140 aa8.9□□□□□ -0.98
SYNPO2-203ENST00000434046 CHMP4AQ9BY43 222 aa8.9□□□□□ -0.98
SYNPO2-203ENST00000434046 LMTK2Q8IWU2 1503 aa8.9□□□□□ -0.99
SYNPO2-203ENST00000434046 PROSER2Q86WR7 435 aaPredicted RBP8.89□□□□□ -0.99
SYNPO2-203ENST00000434046 USP26Q9BXU7 913 aa8.89□□□□□ -0.99
SYNPO2-203ENST00000434046 AK9Q5TCS8 1911 aa8.89□□□□□ -0.99
SYNPO2-203ENST00000434046 LAMC1P11047 1609 aa8.89□□□□□ -0.99
SYNPO2-203ENST00000434046 TTC21BQ7Z4L5 1316 aa8.89□□□□□ -0.99
SYNPO2-203ENST00000434046 GADD45BO75293 160 aaPredicted RBP8.89□□□□□ -0.99
SYNPO2-203ENST00000434046 EIF2S2P20042 333 aaKnown RBP8.89□□□□□ -0.99
SYNPO2-203ENST00000434046 FKBP5Q13451 457 aaPredicted RBP8.89□□□□□ -0.99
SYNPO2-203ENST00000434046 OTUD7AQ8TE49 926 aaPredicted RBP8.89□□□□□ -0.99
SYNPO2-203ENST00000434046 ZNF428Q96B54 188 aa8.89□□□□□ -0.99
SYNPO2-203ENST00000434046 KDM4FA0A1W2PPD8 638 aa8.89□□□□□ -0.99
SYNPO2-203ENST00000434046 ZBTB22O15209 634 aa8.89□□□□□ -0.99
SYNPO2-203ENST00000434046 SDSP20132 328 aa8.89□□□□□ -0.99
SYNPO2-203ENST00000434046 TTC22Q5TAA0 569 aa8.89□□□□□ -0.99
SYNPO2-203ENST00000434046 ABCA6Q8N139 1617 aa8.89□□□□□ -0.99
SYNPO2-203ENST00000434046 ADGRB3O60242 1522 aa8.89□□□□□ -0.99
SYNPO2-203ENST00000434046 CCDC66A2RUB6 948 aa8.88□□□□□ -0.99
SYNPO2-203ENST00000434046 GSPT1P15170 499 aaKnown RBP8.88□□□□□ -0.99
SYNPO2-203ENST00000434046 C1orf141Q5JVX7 400 aa8.88□□□□□ -0.99
SYNPO2-203ENST00000434046 TAF3Q5VWG9 929 aa8.88□□□□□ -0.99
SYNPO2-203ENST00000434046 MCM10Q7L590 875 aa8.88□□□□□ -0.99
SYNPO2-203ENST00000434046 USP48Q86UV5 1035 aa8.88□□□□□ -0.99
SYNPO2-203ENST00000434046 LARP6Q9BRS8 491 aaKnown RBP8.88□□□□□ -0.99
SYNPO2-203ENST00000434046 TPD52L1Q16890 204 aaPredicted RBP8.88□□□□□ -0.99
SYNPO2-203ENST00000434046 GIMAP6Q6P9H5 292 aa8.88□□□□□ -0.99
SYNPO2-203ENST00000434046 PLEKHM2Q8IWE5 1019 aa8.88□□□□□ -0.99
SYNPO2-203ENST00000434046 IL16Q14005 1332 aa8.88□□□□□ -0.99
SYNPO2-203ENST00000434046 VIRMAQ69YN4 1812 aaKnown RBP8.88□□□□□ -0.99
SYNPO2-203ENST00000434046 FAM83GA6ND36 823 aa8.88□□□□□ -0.99
SYNPO2-203ENST00000434046 HSP90AB2PQ58FF8 381 aa8.88□□□□□ -0.99
SYNPO2-203ENST00000434046 ZNF710Q8N1W2 664 aa8.88□□□□□ -0.99
SYNPO2-203ENST00000434046 CCDC112Q8NEF3 446 aa8.88□□□□□ -0.99
SYNPO2-203ENST00000434046 VPS37CA5D8V6 355 aaPredicted RBP8.87□□□□□ -0.99
SYNPO2-203ENST00000434046 PDIA4P13667 645 aaKnown RBP8.87□□□□□ -0.99
SYNPO2-203ENST00000434046 CCDC183Q5T5S1 534 aa8.87□□□□□ -0.99
SYNPO2-203ENST00000434046 TSHZ3Q63HK5 1081 aa8.87□□□□□ -0.99
SYNPO2-203ENST00000434046 ZBTB7BO15156 539 aaPredicted RBP8.87□□□□□ -0.99
SYNPO2-203ENST00000434046 ATF3P18847 181 aa8.87□□□□□ -0.99
SYNPO2-203ENST00000434046 PHACTR3Q96KR7 559 aa8.87□□□□□ -0.99
SYNPO2-203ENST00000434046 TRIM5Q9C035 493 aa8.87□□□□□ -0.99
SYNPO2-203ENST00000434046 TMEM2Q9UHN6 1383 aa8.87□□□□□ -0.99
SYNPO2-203ENST00000434046 WDR33Q9C0J8 1336 aaKnown RBP8.87□□□□□ -0.99
SYNPO2-203ENST00000434046 DTNBO60941 627 aa8.87□□□□□ -0.99
SYNPO2-203ENST00000434046 LTKP29376 864 aa8.87□□□□□ -0.99
SYNPO2-203ENST00000434046 ALDH1L2Q3SY69 923 aa8.87□□□□□ -0.99
SYNPO2-203ENST00000434046 CLEC17AQ6ZS10 378 aa8.87□□□□□ -0.99
SYNPO2-203ENST00000434046 DIP2CQ9Y2E4 1556 aa8.86□□□□□ -0.99
SYNPO2-203ENST00000434046 SLC4A2P04920 1241 aa8.86□□□□□ -0.99
SYNPO2-203ENST00000434046 MIS18AQ9NYP9 233 aa8.86□□□□□ -0.99
SYNPO2-203ENST00000434046 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.86□□□□□ -0.99
SYNPO2-203ENST00000434046 PHF8Q9UPP1 1060 aa8.86□□□□□ -0.99
SYNPO2-203ENST00000434046 V9GYY5 206 aaPredicted RBP8.86□□□□□ -0.99
SYNPO2-203ENST00000434046 ZFYVE9O95405 1425 aa8.86□□□□□ -0.99
SYNPO2-203ENST00000434046 METP08581 1390 aa8.86□□□□□ -0.99
SYNPO2-203ENST00000434046 TRIM35Q9UPQ4 493 aa8.86□□□□□ -0.99
SYNPO2-203ENST00000434046 CNPY2Q9Y2B0 182 aa8.86□□□□□ -0.99
SYNPO2-203ENST00000434046 ZDHHC9Q9Y397 364 aa8.86□□□□□ -0.99
SYNPO2-203ENST00000434046 MCM2P49736 904 aa8.86□□□□□ -0.99
SYNPO2-203ENST00000434046 UVSSAQ2YD98 709 aa8.86□□□□□ -0.99
SYNPO2-203ENST00000434046 AEBP1Q8IUX7 1158 aa8.86□□□□□ -0.99
SYNPO2-203ENST00000434046 SMC3Q9UQE7 1217 aa8.86□□□□□ -0.99
SYNPO2-203ENST00000434046 TBX22Q9Y458 520 aa8.86□□□□□ -0.99
SYNPO2-203ENST00000434046 TNNT1P13805 278 aa8.85□□□□□ -0.99
SYNPO2-203ENST00000434046 GTF2E1P29083 439 aaPredicted RBP8.85□□□□□ -0.99
SYNPO2-203ENST00000434046 TSPYL6Q8N831 410 aa8.85□□□□□ -0.99
SYNPO2-203ENST00000434046 TPM3P06753 285 aa8.85□□□□□ -0.99
SYNPO2-203ENST00000434046 EIF4A2Q14240 407 aaKnown RBP8.85□□□□□ -0.99
SYNPO2-203ENST00000434046 CAMK4Q16566 473 aa8.85□□□□□ -0.99
SYNPO2-203ENST00000434046 MBIPQ9NS73 344 aa8.85□□□□□ -0.99
SYNPO2-203ENST00000434046 PYCARDQ9ULZ3 195 aa8.85□□□□□ -0.99
SYNPO2-203ENST00000434046 REREQ9P2R6 1566 aa8.85□□□□□ -0.99
SYNPO2-203ENST00000434046 EDC4Q6P2E9 1401 aaKnown RBP8.85□□□□□ -0.99
SYNPO2-203ENST00000434046 FOXO3O43524 673 aa8.84□□□□□ -0.99
SYNPO2-203ENST00000434046 KCNA6P17658 529 aa8.84□□□□□ -0.99
SYNPO2-203ENST00000434046 PTGS1P23219 599 aa8.84□□□□□ -0.99
SYNPO2-203ENST00000434046 OGFRQ9NZT2 677 aa8.84□□□□□ -0.99
SYNPO2-203ENST00000434046 ATP6V1DQ9Y5K8 247 aa8.84□□□□□ -0.99
SYNPO2-203ENST00000434046 AGLP35573 1532 aa8.84□□□□□ -0.99
SYNPO2-203ENST00000434046 VWDEQ8N2E2 1590 aa8.84□□□□□ -0.99
SYNPO2-203ENST00000434046 KDM4AO75164 1064 aa8.84□□□□□ -0.99
SYNPO2-203ENST00000434046 DEPDC5O75140 1603 aa8.84□□□□□ -0.99
SYNPO2-203ENST00000434046 CCDC192P0DO97 292 aa8.84□□□□□ -0.99
SYNPO2-203ENST00000434046 CCDC30Q5VVM6 783 aa8.84□□□□□ -0.99
SYNPO2-203ENST00000434046 NLRP2Q9NX02 1062 aa8.84□□□□□ -0.99
SYNPO2-203ENST00000434046 CAMSAP1Q5T5Y3 1602 aa8.83□□□□□ -1
SYNPO2-203ENST00000434046 CYP2E1P05181 493 aaPredicted RBP8.83□□□□□ -1
SYNPO2-203ENST00000434046 MX1P20591 662 aa8.83□□□□□ -1
SYNPO2-203ENST00000434046 CCDC186Q7Z3E2 898 aa8.83□□□□□ -1
SYNPO2-203ENST00000434046 SIRT2Q8IXJ6 389 aa8.83□□□□□ -1
SYNPO2-203ENST00000434046 RAPGEF4Q8WZA2 1011 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms