RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 CLEC17AQ6ZS10 378 aa14.51□□□□□ -0.09
CD44-209ENST00000433892 PIK3C2AO00443 1686 aa14.51□□□□□ -0.09
CD44-209ENST00000433892 PNMA6EA0A0J9YXQ4 647 aa14.5□□□□□ -0.09
CD44-209ENST00000433892 HTATSF1O43719 755 aaKnown RBP14.5□□□□□ -0.09
CD44-209ENST00000433892 PKP1Q13835 747 aa14.5□□□□□ -0.09
CD44-209ENST00000433892 IL17REQ8NFR9 667 aa14.5□□□□□ -0.09
CD44-209ENST00000433892 GNAI3P08754 354 aa14.49□□□□□ -0.09
CD44-209ENST00000433892 ZGPATQ8N5A5 531 aaKnown RBP14.49□□□□□ -0.09
CD44-209ENST00000433892 LRRCC1Q9C099 1032 aa14.49□□□□□ -0.09
CD44-209ENST00000433892 SLIT1O75093 1534 aa14.49□□□□□ -0.09
CD44-209ENST00000433892 NUCB2P80303 420 aa14.49□□□□□ -0.09
CD44-209ENST00000433892 ABTB2Q8N961 1025 aa14.49□□□□□ -0.09
CD44-209ENST00000433892 DDX49Q9Y6V7 483 aaKnown RBP14.49□□□□□ -0.09
CD44-209ENST00000433892 KCNA6P17658 529 aa14.48□□□□□ -0.09
CD44-209ENST00000433892 MCTP1Q6DN14 999 aa14.48□□□□□ -0.09
CD44-209ENST00000433892 USHBP1Q8N6Y0 703 aa14.48□□□□□ -0.09
CD44-209ENST00000433892 ARHGAP23Q9P227 1491 aa14.48□□□□□ -0.09
CD44-209ENST00000433892 ATP8B2P98198 1209 aa14.48□□□□□ -0.09
CD44-209ENST00000433892 TAF7Q15545 349 aaPredicted RBP14.48□□□□□ -0.09
CD44-209ENST00000433892 THEMISQ8N1K5 641 aaPredicted RBP14.48□□□□□ -0.09
CD44-209ENST00000433892 LRRFIP2Q9Y608 721 aaKnown RBP14.48□□□□□ -0.09
CD44-209ENST00000433892 SALL3Q9BXA9 1300 aa14.47□□□□□ -0.09
CD44-209ENST00000433892 MAP3K5Q99683 1374 aa14.47□□□□□ -0.09
CD44-209ENST00000433892 CYP2E1P05181 493 aaPredicted RBP14.47□□□□□ -0.09
CD44-209ENST00000433892 MX1P20591 662 aa14.47□□□□□ -0.09
CD44-209ENST00000433892 C14orf37Q86TY3 774 aa14.47□□□□□ -0.09
CD44-209ENST00000433892 KLHL40Q2TBA0 621 aa14.46□□□□□ -0.09
CD44-209ENST00000433892 CWC22Q9HCG8 908 aaKnown RBP14.46□□□□□ -0.09
CD44-209ENST00000433892 RILPL2Q969X0 211 aa14.46□□□□□ -0.09
CD44-209ENST00000433892 TRIM6-TRIM34B2RNG4 842 aa14.45□□□□□ -0.1
CD44-209ENST00000433892 NEK4P51957 841 aa14.45□□□□□ -0.1
CD44-209ENST00000433892 ESYT1Q9BSJ8 1104 aa14.45□□□□□ -0.1
CD44-209ENST00000433892 USP44Q9H0E7 712 aa14.45□□□□□ -0.1
CD44-209ENST00000433892 IBTKQ9P2D0 1353 aaPredicted RBP14.45□□□□□ -0.1
CD44-209ENST00000433892 NWD1Q149M9 1564 aa14.45□□□□□ -0.1
CD44-209ENST00000433892 LRRC37A3O60309 1634 aa14.45□□□□□ -0.1
CD44-209ENST00000433892 HDGFL1Q5TGJ6 251 aa14.45□□□□□ -0.1
CD44-209ENST00000433892 PHAXQ9H814 394 aaKnown RBP14.45□□□□□ -0.1
CD44-209ENST00000433892 NCLP19338 710 aaKnown RBP14.44□□□□□ -0.1
CD44-209ENST00000433892 FAM208AQ9UK61 1670 aaKnown RBP14.44□□□□□ -0.1
CD44-209ENST00000433892 UBTFL1P0CB47 393 aaPredicted RBP14.44□□□□□ -0.1
CD44-209ENST00000433892 LMBRD1Q9NUN5 540 aa14.44□□□□□ -0.1
CD44-209ENST00000433892 ZDHHC9Q9Y397 364 aa14.44□□□□□ -0.1
CD44-209ENST00000433892 XRN1Q8IZH2 1706 aaKnown RBP14.44□□□□□ -0.1
CD44-209ENST00000433892 ANKARQ7Z5J8 1434 aa14.43□□□□□ -0.1
CD44-209ENST00000433892 CHMLP26374 656 aa14.43□□□□□ -0.1
CD44-209ENST00000433892 UNC5CLQ8IV45 518 aa14.43□□□□□ -0.1
CD44-209ENST00000433892 IL1RAPL2Q9NP60 686 aa14.43□□□□□ -0.1
CD44-209ENST00000433892 ANO2Q9NQ90 1003 aa14.43□□□□□ -0.1
CD44-209ENST00000433892 PALD1Q9ULE6 856 aa14.43□□□□□ -0.1
CD44-209ENST00000433892 SOS1Q07889 1333 aaPredicted RBP14.42□□□□□ -0.1
CD44-209ENST00000433892 EIF2S2P20042 333 aaKnown RBP14.42□□□□□ -0.1
CD44-209ENST00000433892 CLCN1P35523 988 aa14.42□□□□□ -0.1
CD44-209ENST00000433892 CAVIN1Q6NZI2 390 aaKnown RBP14.42□□□□□ -0.1
CD44-209ENST00000433892 TMX3Q96JJ7 454 aa14.42□□□□□ -0.1
CD44-209ENST00000433892 CHAMP1Q96JM3 812 aa14.42□□□□□ -0.1
CD44-209ENST00000433892 BABAM1Q9NWV8 329 aa14.42□□□□□ -0.1
CD44-209ENST00000433892 STAP2Q9UGK3 403 aa14.42□□□□□ -0.1
CD44-209ENST00000433892 MARF1Q9Y4F3 1742 aaKnown RBP14.42□□□□□ -0.1
CD44-209ENST00000433892 TRIM44Q96DX7 344 aaPredicted RBP14.41□□□□□ -0.1
CD44-209ENST00000433892 RBM33Q96EV2 1170 aaKnown RBP14.41□□□□□ -0.1
CD44-209ENST00000433892 PRPF40AO75400 957 aaKnown RBP14.41□□□□□ -0.1
CD44-209ENST00000433892 FOXD4L5Q5VV16 416 aaPredicted RBP14.41□□□□□ -0.1
CD44-209ENST00000433892 FOXD4L4Q8WXT5 416 aaPredicted RBP14.41□□□□□ -0.1
CD44-209ENST00000433892 ERBB4Q15303 1308 aa14.4□□□□□ -0.1
CD44-209ENST00000433892 MCCP23508 829 aa14.4□□□□□ -0.1
CD44-209ENST00000433892 NASPP49321 788 aaPredicted RBP14.4□□□□□ -0.1
CD44-209ENST00000433892 NOL8Q76FK4 1167 aaKnown RBP14.4□□□□□ -0.1
CD44-209ENST00000433892 PPP1R42Q7Z4L9 355 aa14.4□□□□□ -0.1
CD44-209ENST00000433892 NUTM1Q86Y26 1132 aa14.4□□□□□ -0.1
CD44-209ENST00000433892 SRCIN1Q9C0H9 1055 aa14.4□□□□□ -0.1
CD44-209ENST00000433892 LGR6Q9HBX8 967 aa14.4□□□□□ -0.1
CD44-209ENST00000433892 ZBTB7CA1YPR0 619 aa14.4□□□□□ -0.1
CD44-209ENST00000433892 ESPNB1AK53 854 aa14.4□□□□□ -0.1
CD44-209ENST00000433892 NBPF6Q5VWK0 638 aa14.4□□□□□ -0.1
CD44-209ENST00000433892 SSH3Q8TE77 659 aa14.4□□□□□ -0.1
CD44-209ENST00000433892 NBPF4Q96M43 638 aa14.4□□□□□ -0.1
CD44-209ENST00000433892 SURF6O75683 361 aaKnown RBP14.39□□□□□ -0.11
CD44-209ENST00000433892 ZSCAN23Q3MJ62 389 aa14.39□□□□□ -0.11
CD44-209ENST00000433892 PHF8Q9UPP1 1060 aa14.39□□□□□ -0.11
CD44-209ENST00000433892 MAP4K4O95819 1239 aaPredicted RBP14.39□□□□□ -0.11
CD44-209ENST00000433892 IL25Q9H293 177 aa14.39□□□□□ -0.11
CD44-209ENST00000433892 CACNA1FO60840 1977 aa14.39□□□□□ -0.11
CD44-209ENST00000433892 PXDNLA1KZ92 1463 aa14.38□□□□□ -0.11
CD44-209ENST00000433892 TUBGCP6Q96RT7 1819 aa14.38□□□□□ -0.11
CD44-209ENST00000433892 NBPF7P0C2Y1 421 aaPredicted RBP14.38□□□□□ -0.11
CD44-209ENST00000433892 MCM2P49736 904 aa14.38□□□□□ -0.11
CD44-209ENST00000433892 EIF4A1P60842 406 aaKnown RBP14.38□□□□□ -0.11
CD44-209ENST00000433892 GPT2Q8TD30 523 aa14.38□□□□□ -0.11
CD44-209ENST00000433892 IP6K1Q92551 441 aa14.38□□□□□ -0.11
CD44-209ENST00000433892 CHPF2Q9P2E5 772 aa14.38□□□□□ -0.11
CD44-209ENST00000433892 CEMIPQ8WUJ3 1361 aa14.38□□□□□ -0.11
CD44-209ENST00000433892 SRGAP3O43295 1099 aa14.38□□□□□ -0.11
CD44-209ENST00000433892 KCNQ3O43525 872 aa14.38□□□□□ -0.11
CD44-209ENST00000433892 ZNF445P59923 1031 aa14.38□□□□□ -0.11
CD44-209ENST00000433892 UPF3BQ9BZI7 483 aaKnown RBP14.38□□□□□ -0.11
CD44-209ENST00000433892 PI4KAP2A4QPH2 592 aa14.37□□□□□ -0.11
CD44-209ENST00000433892 ANXA1P04083 346 aa14.37□□□□□ -0.11
CD44-209ENST00000433892 ANAPC15P60006 121 aa14.37□□□□□ -0.11
CD44-209ENST00000433892 PI4KAP1Q8N8J0 262 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms