RNA–Protein interactions for RNA: ENST00000433753.4

SEMA3B-204, Transcript of semaphorin 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-204ENST00000433753 MRE11P49959 708 aa21.37■■□□□ 1.01
SEMA3B-204ENST00000433753 THEMISQ8N1K5 641 aaPredicted RBP21.37■■□□□ 1.01
SEMA3B-204ENST00000433753 PHAXQ9H814 394 aaKnown RBP21.37■■□□□ 1.01
SEMA3B-204ENST00000433753 LRRFIP2Q9Y608 721 aaKnown RBP21.37■■□□□ 1.01
SEMA3B-204ENST00000433753 BAG4O95429 457 aaKnown RBP21.36■■□□□ 1.01
SEMA3B-204ENST00000433753 SETD1BQ9UPS6 1966 aaKnown RBP21.36■■□□□ 1.01
SEMA3B-204ENST00000433753 ERC2O15083 957 aa21.36■■□□□ 1.01
SEMA3B-204ENST00000433753 CHAMP1Q96JM3 812 aa21.36■■□□□ 1.01
SEMA3B-204ENST00000433753 RILPL2Q969X0 211 aa21.35■■□□□ 1.01
SEMA3B-204ENST00000433753 LRRCC1Q9C099 1032 aa21.35■■□□□ 1.01
SEMA3B-204ENST00000433753 EIF2S2P20042 333 aaKnown RBP21.34■■□□□ 1.01
SEMA3B-204ENST00000433753 TAF7Q15545 349 aaPredicted RBP21.34■■□□□ 1.01
SEMA3B-204ENST00000433753 REC8O95072 547 aa21.34■■□□□ 1.01
SEMA3B-204ENST00000433753 MCTP1Q6DN14 999 aa21.34■■□□□ 1.01
SEMA3B-204ENST00000433753 USP44Q9H0E7 712 aa21.33■■□□□ 1.01
SEMA3B-204ENST00000433753 OSBPL3Q9H4L5 887 aa21.33■■□□□ 1.01
SEMA3B-204ENST00000433753 IL1RAPL2Q9NP60 686 aa21.33■■□□□ 1.01
SEMA3B-204ENST00000433753 TRIM6-TRIM34B2RNG4 842 aa21.33■■□□□ 1
SEMA3B-204ENST00000433753 ATP8B2P98198 1209 aa21.33■■□□□ 1
SEMA3B-204ENST00000433753 ARHGAP23Q9P227 1491 aa21.32■■□□□ 1
SEMA3B-204ENST00000433753 HTATSF1O43719 755 aaKnown RBP21.32■■□□□ 1
SEMA3B-204ENST00000433753 GNAI3P08754 354 aa21.32■■□□□ 1
SEMA3B-204ENST00000433753 FOXD4L5Q5VV16 416 aaPredicted RBP21.32■■□□□ 1
SEMA3B-204ENST00000433753 UNC5CLQ8IV45 518 aa21.32■■□□□ 1
SEMA3B-204ENST00000433753 FOXD4L4Q8WXT5 416 aaPredicted RBP21.32■■□□□ 1
SEMA3B-204ENST00000433753 LGR6Q9HBX8 967 aa21.32■■□□□ 1
SEMA3B-204ENST00000433753 DDX49Q9Y6V7 483 aaKnown RBP21.32■■□□□ 1
SEMA3B-204ENST00000433753 MAP3K5Q99683 1374 aa21.32■■□□□ 1
SEMA3B-204ENST00000433753 MX1P20591 662 aa21.31■■□□□ 1
SEMA3B-204ENST00000433753 HDGFL1Q5TGJ6 251 aa21.31■■□□□ 1
SEMA3B-204ENST00000433753 SLIT1O75093 1534 aa21.31■■□□□ 1
SEMA3B-204ENST00000433753 ST18O60284 1047 aa21.31■■□□□ 1
SEMA3B-204ENST00000433753 SALL3Q9BXA9 1300 aa21.31■■□□□ 1
SEMA3B-204ENST00000433753 SKOR2Q2VWA4 1001 aaPredicted RBP21.31■■□□□ 1
SEMA3B-204ENST00000433753 NOL8Q76FK4 1167 aaKnown RBP21.31■■□□□ 1
SEMA3B-204ENST00000433753 ANXA1P04083 346 aa21.3■■□□□ 1
SEMA3B-204ENST00000433753 NEK4P51957 841 aa21.3■■□□□ 1
SEMA3B-204ENST00000433753 PALD1Q9ULE6 856 aa21.3■■□□□ 1
SEMA3B-204ENST00000433753 KCNQ3O43525 872 aa21.3■■□□□ 1
SEMA3B-204ENST00000433753 MAP4K4O95819 1239 aaPredicted RBP21.29■■□□□ 1
SEMA3B-204ENST00000433753 NCLP19338 710 aaKnown RBP21.29■■□□□ 1
SEMA3B-204ENST00000433753 NBPF6Q5VWK0 638 aa21.29■■□□□ 1
SEMA3B-204ENST00000433753 NBPF4Q96M43 638 aa21.29■■□□□ 1
SEMA3B-204ENST00000433753 NWD1Q149M9 1564 aa21.29■■□□□ 1
SEMA3B-204ENST00000433753 GOLGA6L22H0YM25 854 aa21.29■■□□□ 1
SEMA3B-204ENST00000433753 NUTM1Q86Y26 1132 aa21.29■■□□□ 1
SEMA3B-204ENST00000433753 EIF5BO60841 1220 aaKnown RBP21.28■■□□□ 1
SEMA3B-204ENST00000433753 PRKCSHP14314 528 aaPredicted RBP21.28■■□□□ 1
SEMA3B-204ENST00000433753 ESYT1Q9BSJ8 1104 aa21.28■■□□□ 1
SEMA3B-204ENST00000433753 UBTFL1P0CB47 393 aaPredicted RBP21.28■■□□□ 1
SEMA3B-204ENST00000433753 ANO2Q9NQ90 1003 aa21.27■■□□□ 1
SEMA3B-204ENST00000433753 ZDHHC9Q9Y397 364 aa21.27■■□□□ 1
SEMA3B-204ENST00000433753 CYP2E1P05181 493 aaPredicted RBP21.27■■□□□ 1
SEMA3B-204ENST00000433753 LRRC59Q96AG4 307 aaKnown RBP21.27■■□□□ 1
SEMA3B-204ENST00000433753 IL25Q9H293 177 aa21.27■■□□□ 1
SEMA3B-204ENST00000433753 IBTKQ9P2D0 1353 aaPredicted RBP21.27■■□□□ 1
SEMA3B-204ENST00000433753 CLEC17AQ6ZS10 378 aa21.26■□□□□ 0.99
SEMA3B-204ENST00000433753 PHF8Q9UPP1 1060 aa21.26■□□□□ 0.99
SEMA3B-204ENST00000433753 CHMLP26374 656 aa21.26■□□□□ 0.99
SEMA3B-204ENST00000433753 NUCB2P80303 420 aa21.26■□□□□ 0.99
SEMA3B-204ENST00000433753 NBPF7P0C2Y1 421 aaPredicted RBP21.25■□□□□ 0.99
SEMA3B-204ENST00000433753 PPP1R42Q7Z4L9 355 aa21.25■□□□□ 0.99
SEMA3B-204ENST00000433753 XPCQ01831 940 aaPredicted RBP21.25■□□□□ 0.99
SEMA3B-204ENST00000433753 CHPF2Q9P2E5 772 aa21.25■□□□□ 0.99
SEMA3B-204ENST00000433753 SURF6O75683 361 aaKnown RBP21.24■□□□□ 0.99
SEMA3B-204ENST00000433753 PRPF40AO75400 957 aaKnown RBP21.24■□□□□ 0.99
SEMA3B-204ENST00000433753 KLHL40Q2TBA0 621 aa21.24■□□□□ 0.99
SEMA3B-204ENST00000433753 CAVIN1Q6NZI2 390 aaKnown RBP21.24■□□□□ 0.99
SEMA3B-204ENST00000433753 TMX3Q96JJ7 454 aa21.24■□□□□ 0.99
SEMA3B-204ENST00000433753 LMBRD1Q9NUN5 540 aa21.24■□□□□ 0.99
SEMA3B-204ENST00000433753 MARF1Q9Y4F3 1742 aaKnown RBP21.24■□□□□ 0.99
SEMA3B-204ENST00000433753 XRN1Q8IZH2 1706 aaKnown RBP21.23■□□□□ 0.99
SEMA3B-204ENST00000433753 ESCO1Q5FWF5 840 aa21.23■□□□□ 0.99
SEMA3B-204ENST00000433753 MPRIPQ6WCQ1 1025 aa21.23■□□□□ 0.99
SEMA3B-204ENST00000433753 UPF3BQ9BZI7 483 aaKnown RBP21.23■□□□□ 0.99
SEMA3B-204ENST00000433753 FAM208AQ9UK61 1670 aaKnown RBP21.23■□□□□ 0.99
SEMA3B-204ENST00000433753 PI4KAP2A4QPH2 592 aa21.22■□□□□ 0.99
SEMA3B-204ENST00000433753 PTMSP20962 102 aa21.22■□□□□ 0.99
SEMA3B-204ENST00000433753 EIF4A1P60842 406 aaKnown RBP21.22■□□□□ 0.99
SEMA3B-204ENST00000433753 PI4KAP1Q8N8J0 262 aa21.22■□□□□ 0.99
SEMA3B-204ENST00000433753 IP6K1Q92551 441 aa21.22■□□□□ 0.99
SEMA3B-204ENST00000433753 LRRC37A3O60309 1634 aa21.22■□□□□ 0.99
SEMA3B-204ENST00000433753 PSME1Q06323 249 aa21.21■□□□□ 0.99
SEMA3B-204ENST00000433753 SRCIN1Q9C0H9 1055 aa21.21■□□□□ 0.99
SEMA3B-204ENST00000433753 CWC22Q9HCG8 908 aaKnown RBP21.21■□□□□ 0.99
SEMA3B-204ENST00000433753 SRGAP3O43295 1099 aa21.21■□□□□ 0.99
SEMA3B-204ENST00000433753 ERBB4Q15303 1308 aa21.21■□□□□ 0.99
SEMA3B-204ENST00000433753 ANKARQ7Z5J8 1434 aa21.21■□□□□ 0.99
SEMA3B-204ENST00000433753 SSH3Q8TE77 659 aa21.2■□□□□ 0.98
SEMA3B-204ENST00000433753 RBM27Q9P2N5 1060 aaKnown RBP21.2■□□□□ 0.98
SEMA3B-204ENST00000433753 STAP2Q9UGK3 403 aa21.2■□□□□ 0.98
SEMA3B-204ENST00000433753 ISY1Q9ULR0 285 aaKnown RBP21.2■□□□□ 0.98
SEMA3B-204ENST00000433753 SOS1Q07889 1333 aaPredicted RBP21.19■□□□□ 0.98
SEMA3B-204ENST00000433753 FOXD4L6Q3SYB3 417 aaPredicted RBP21.19■□□□□ 0.98
SEMA3B-204ENST00000433753 LMOD2Q6P5Q4 547 aa21.19■□□□□ 0.98
SEMA3B-204ENST00000433753 FOXD4L3Q6VB84 417 aaPredicted RBP21.19■□□□□ 0.98
SEMA3B-204ENST00000433753 RHPN1Q8TCX5 695 aa21.18■□□□□ 0.98
SEMA3B-204ENST00000433753 GPT2Q8TD30 523 aa21.18■□□□□ 0.98
SEMA3B-204ENST00000433753 NSFL1CQ9UNZ2 370 aaKnown RBP21.18■□□□□ 0.98
SEMA3B-204ENST00000433753 FER1L4A9Z1Z3 1794 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms