RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 OVOS2A0A0G2JMS6 1433 aa7.79□□□□□ -1.16
HMGB3P24-201ENST00000433260 PSEN1P49768 467 aa7.79□□□□□ -1.16
HMGB3P24-201ENST00000433260 RYDENQ9NUL5 291 aaKnown RBP7.79□□□□□ -1.16
HMGB3P24-201ENST00000433260 MEGF6O75095 1541 aa7.78□□□□□ -1.16
HMGB3P24-201ENST00000433260 TNS1Q9HBL0 1735 aaKnown RBP7.78□□□□□ -1.16
HMGB3P24-201ENST00000433260 DIAPH1O60610 1272 aaKnown RBP7.78□□□□□ -1.16
HMGB3P24-201ENST00000433260 HMOX1P09601 288 aa7.78□□□□□ -1.16
HMGB3P24-201ENST00000433260 PPP2R1AP30153 589 aa7.78□□□□□ -1.16
HMGB3P24-201ENST00000433260 IL13P35225 146 aa7.78□□□□□ -1.16
HMGB3P24-201ENST00000433260 PRIM1P49642 420 aaKnown RBP7.78□□□□□ -1.16
HMGB3P24-201ENST00000433260 CLCN6P51797 869 aa7.78□□□□□ -1.16
HMGB3P24-201ENST00000433260 SULT6B1Q6IMI4 303 aa7.78□□□□□ -1.16
HMGB3P24-201ENST00000433260 IFNL1Q8IU54 200 aa7.78□□□□□ -1.16
HMGB3P24-201ENST00000433260 AEBP1Q8IUX7 1158 aa7.78□□□□□ -1.16
HMGB3P24-201ENST00000433260 CAMKK2Q96RR4 588 aa7.78□□□□□ -1.16
HMGB3P24-201ENST00000433260 PSDA5PKW4 1024 aaPredicted RBP7.77□□□□□ -1.17
HMGB3P24-201ENST00000433260 U2SURPO15042 1029 aaKnown RBP7.77□□□□□ -1.17
HMGB3P24-201ENST00000433260 SPG7Q9UQ90 795 aa7.77□□□□□ -1.17
HMGB3P24-201ENST00000433260 TNS2Q63HR2 1409 aa7.77□□□□□ -1.17
HMGB3P24-201ENST00000433260 SHANK3Q9BYB0 1731 aa7.76□□□□□ -1.17
HMGB3P24-201ENST00000433260 ZNF316A6NFI3 1004 aaPredicted RBP7.76□□□□□ -1.17
HMGB3P24-201ENST00000433260 CYP27B1O15528 508 aa7.76□□□□□ -1.17
HMGB3P24-201ENST00000433260 PLEKHO1Q53GL0 409 aaPredicted RBP7.76□□□□□ -1.17
HMGB3P24-201ENST00000433260 MPRIPQ6WCQ1 1025 aa7.76□□□□□ -1.17
HMGB3P24-201ENST00000433260 IGSF1Q8N6C5 1336 aa7.76□□□□□ -1.17
HMGB3P24-201ENST00000433260 NPC1L1Q9UHC9 1359 aa7.75□□□□□ -1.17
HMGB3P24-201ENST00000433260 PLSCR1O15162 318 aa7.75□□□□□ -1.17
HMGB3P24-201ENST00000433260 KCNQ4P56696 695 aa7.75□□□□□ -1.17
HMGB3P24-201ENST00000433260 TXNRD1Q16881 649 aa7.75□□□□□ -1.17
HMGB3P24-201ENST00000433260 IFNL2Q8IZJ0 200 aa7.75□□□□□ -1.17
HMGB3P24-201ENST00000433260 CFAP53Q96M91 514 aa7.75□□□□□ -1.17
HMGB3P24-201ENST00000433260 PCDH11XQ9BZA7 1347 aa7.75□□□□□ -1.17
HMGB3P24-201ENST00000433260 PCDH11YQ9BZA8 1340 aa7.75□□□□□ -1.17
HMGB3P24-201ENST00000433260 BTAF1O14981 1849 aa7.74□□□□□ -1.17
HMGB3P24-201ENST00000433260 PHKG2P15735 406 aa7.74□□□□□ -1.17
HMGB3P24-201ENST00000433260 R3HDM1Q15032 1099 aaKnown RBP7.74□□□□□ -1.17
HMGB3P24-201ENST00000433260 NBPF14Q5TI25 921 aa7.74□□□□□ -1.17
HMGB3P24-201ENST00000433260 DOT1LQ8TEK3 1739 aa7.74□□□□□ -1.17
HMGB3P24-201ENST00000433260 ITGB4P16144 1822 aa7.73□□□□□ -1.17
HMGB3P24-201ENST00000433260 NHSQ6T4R5 1651 aa7.73□□□□□ -1.17
HMGB3P24-201ENST00000433260 AMOTQ4VCS5 1084 aa7.73□□□□□ -1.17
HMGB3P24-201ENST00000433260 ZNF530Q6P9A1 599 aaPredicted RBP7.73□□□□□ -1.17
HMGB3P24-201ENST00000433260 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.73□□□□□ -1.17
HMGB3P24-201ENST00000433260 BCL9O00512 1426 aa7.72□□□□□ -1.17
HMGB3P24-201ENST00000433260 U2AF1L5P0DN76 240 aaPredicted RBP7.72□□□□□ -1.17
HMGB3P24-201ENST00000433260 U2AF1Q01081 240 aaKnown RBP eCLIP7.72□□□□□ -1.17
HMGB3P24-201ENST00000433260 GOLGA2Q08379 1002 aa7.72□□□□□ -1.17
HMGB3P24-201ENST00000433260 NKX1-1Q15270 411 aaPredicted RBP7.72□□□□□ -1.17
HMGB3P24-201ENST00000433260 RALBP1Q15311 655 aa7.72□□□□□ -1.17
HMGB3P24-201ENST00000433260 MTHFSDQ2M296 383 aaKnown RBP7.72□□□□□ -1.17
HMGB3P24-201ENST00000433260 C1orf141Q5JVX7 400 aa7.72□□□□□ -1.17
HMGB3P24-201ENST00000433260 POTEHQ6S545 545 aa7.72□□□□□ -1.17
HMGB3P24-201ENST00000433260 NUDCQ9Y266 331 aa7.72□□□□□ -1.17
HMGB3P24-201ENST00000433260 PKD1L3Q7Z443 1732 aa7.72□□□□□ -1.17
HMGB3P24-201ENST00000433260 NCAPD2Q15021 1401 aa7.71□□□□□ -1.17
HMGB3P24-201ENST00000433260 PRKAR2BP31323 418 aa7.71□□□□□ -1.18
HMGB3P24-201ENST00000433260 CABP4P57796 275 aa7.71□□□□□ -1.18
HMGB3P24-201ENST00000433260 NFATC2IPQ8NCF5 419 aa7.71□□□□□ -1.18
HMGB3P24-201ENST00000433260 PIGBQ92521 554 aa7.71□□□□□ -1.18
HMGB3P24-201ENST00000433260 MS4A3Q96HJ5 214 aa7.71□□□□□ -1.18
HMGB3P24-201ENST00000433260 PHACTR3Q96KR7 559 aa7.71□□□□□ -1.18
HMGB3P24-201ENST00000433260 LGR6Q9HBX8 967 aa7.71□□□□□ -1.18
HMGB3P24-201ENST00000433260 LRRC4BQ9NT99 713 aa7.71□□□□□ -1.18
HMGB3P24-201ENST00000433260 TMOD3Q9NYL9 352 aa7.71□□□□□ -1.18
HMGB3P24-201ENST00000433260 NUP188Q5SRE5 1749 aa7.71□□□□□ -1.18
HMGB3P24-201ENST00000433260 PARD3Q8TEW0 1356 aa7.71□□□□□ -1.18
HMGB3P24-201ENST00000433260 RREB1Q92766 1687 aa7.7□□□□□ -1.18
HMGB3P24-201ENST00000433260 TOGARAM1Q9Y4F4 1720 aa7.7□□□□□ -1.18
HMGB3P24-201ENST00000433260 DCAF5Q96JK2 942 aa7.7□□□□□ -1.18
HMGB3P24-201ENST00000433260 STK32BQ9NY57 414 aa7.7□□□□□ -1.18
HMGB3P24-201ENST00000433260 CCNL1Q9UK58 526 aaPredicted RBP7.7□□□□□ -1.18
HMGB3P24-201ENST00000433260 ASAP1Q9ULH1 1129 aa7.7□□□□□ -1.18
HMGB3P24-201ENST00000433260 VIRMAQ69YN4 1812 aaKnown RBP7.7□□□□□ -1.18
HMGB3P24-201ENST00000433260 COL3A1P02461 1466 aaPredicted RBP7.69□□□□□ -1.18
HMGB3P24-201ENST00000433260 HSP90AB1P08238 724 aaKnown RBP7.69□□□□□ -1.18
HMGB3P24-201ENST00000433260 SLC15A2Q16348 729 aa7.69□□□□□ -1.18
HMGB3P24-201ENST00000433260 AKAP4Q5JQC9 854 aa7.69□□□□□ -1.18
HMGB3P24-201ENST00000433260 TMEM106CQ9BVX2 250 aa7.69□□□□□ -1.18
HMGB3P24-201ENST00000433260 PDGFDQ9GZP0 370 aaPredicted RBP7.69□□□□□ -1.18
HMGB3P24-201ENST00000433260 ATG3Q9NT62 314 aa7.69□□□□□ -1.18
HMGB3P24-201ENST00000433260 KDRP35968 1356 aa7.69□□□□□ -1.18
HMGB3P24-201ENST00000433260 ERVV-2B6SEH9 535 aa7.68□□□□□ -1.18
HMGB3P24-201ENST00000433260 RNMTO43148 476 aaKnown RBP7.68□□□□□ -1.18
HMGB3P24-201ENST00000433260 FCHSD2O94868 740 aa7.68□□□□□ -1.18
HMGB3P24-201ENST00000433260 ATP6V1AP38606 617 aa7.68□□□□□ -1.18
HMGB3P24-201ENST00000433260 VSIG10Q8N0Z9 540 aa7.68□□□□□ -1.18
HMGB3P24-201ENST00000433260 RSPH6AQ9H0K4 717 aa7.68□□□□□ -1.18
HMGB3P24-201ENST00000433260 PRKRIP1Q9H875 184 aaPredicted RBP7.68□□□□□ -1.18
HMGB3P24-201ENST00000433260 ANO8Q9HCE9 1232 aaPredicted RBP7.68□□□□□ -1.18
HMGB3P24-201ENST00000433260 MYBBP1AQ9BQG0 1328 aaKnown RBP7.68□□□□□ -1.18
HMGB3P24-201ENST00000433260 LY75O60449 1722 aa7.67□□□□□ -1.18
HMGB3P24-201ENST00000433260 RGPD3A6NKT7 1758 aaPredicted RBP7.67□□□□□ -1.18
HMGB3P24-201ENST00000433260 RGPD4Q7Z3J3 1758 aa7.67□□□□□ -1.18
HMGB3P24-201ENST00000433260 SCN11AQ9UI33 1791 aa7.67□□□□□ -1.18
HMGB3P24-201ENST00000433260 GNAT3A8MTJ3 354 aa7.67□□□□□ -1.18
HMGB3P24-201ENST00000433260 PTCD1O75127 700 aaKnown RBP7.67□□□□□ -1.18
HMGB3P24-201ENST00000433260 NEFMP07197 916 aa7.67□□□□□ -1.18
HMGB3P24-201ENST00000433260 TIE1P35590 1138 aa7.67□□□□□ -1.18
HMGB3P24-201ENST00000433260 SLC39A6Q13433 755 aa7.67□□□□□ -1.18
HMGB3P24-201ENST00000433260 ZNF827Q17R98 1081 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms