RNA–Protein interactions for RNA: ENST00000432641.2

SDHAF3-202, Transcript of succinate dehydrogenase complex assembly factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHAF3, Length 2,060 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3-202ENST00000432641 PLEKHG2Q9H7P9 1386 aa25.43■■□□□ 1.66
SDHAF3-202ENST00000432641 G2E3Q7L622 706 aa25.43■■□□□ 1.66
SDHAF3-202ENST00000432641 ZNF530Q6P9A1 599 aaPredicted RBP25.43■■□□□ 1.66
SDHAF3-202ENST00000432641 MEIS3Q99687 375 aa25.42■■□□□ 1.66
SDHAF3-202ENST00000432641 GNAI3P08754 354 aa25.41■■□□□ 1.66
SDHAF3-202ENST00000432641 C1orf141Q5JVX7 400 aa25.41■■□□□ 1.66
SDHAF3-202ENST00000432641 C22orf23Q9BZE7 217 aa25.41■■□□□ 1.66
SDHAF3-202ENST00000432641 TEFQ10587 303 aa25.41■■□□□ 1.66
SDHAF3-202ENST00000432641 LRRC59Q96AG4 307 aaKnown RBP25.41■■□□□ 1.66
SDHAF3-202ENST00000432641 FKBP5Q13451 457 aaPredicted RBP25.4■■□□□ 1.66
SDHAF3-202ENST00000432641 NPHP3Q7Z494 1330 aa25.4■■□□□ 1.66
SDHAF3-202ENST00000432641 SLC4A10Q6U841 1118 aa25.4■■□□□ 1.66
SDHAF3-202ENST00000432641 SLC4A3P48751 1232 aa25.39■■□□□ 1.65
SDHAF3-202ENST00000432641 HDGFL1Q5TGJ6 251 aa25.39■■□□□ 1.65
SDHAF3-202ENST00000432641 GNAI2P04899 355 aa25.38■■□□□ 1.65
SDHAF3-202ENST00000432641 MFAP1P55081 439 aaKnown RBP25.38■■□□□ 1.65
SDHAF3-202ENST00000432641 EIF4A1P60842 406 aaKnown RBP25.38■■□□□ 1.65
SDHAF3-202ENST00000432641 ADAMTS7Q9UKP4 1686 aa25.37■■□□□ 1.65
SDHAF3-202ENST00000432641 ERBB3P21860 1342 aa25.37■■□□□ 1.65
SDHAF3-202ENST00000432641 F6X3S4 739 aa25.36■■□□□ 1.65
SDHAF3-202ENST00000432641 TNS3Q68CZ2 1445 aa25.36■■□□□ 1.65
SDHAF3-202ENST00000432641 RNMTO43148 476 aaKnown RBP25.35■■□□□ 1.65
SDHAF3-202ENST00000432641 LGR6Q9HBX8 967 aa25.35■■□□□ 1.65
SDHAF3-202ENST00000432641 RGPD5Q99666 1765 aa25.35■■□□□ 1.65
SDHAF3-202ENST00000432641 BTBD11A6QL63 1104 aa25.34■■□□□ 1.65
SDHAF3-202ENST00000432641 RBM25P49756 843 aaKnown RBP25.34■■□□□ 1.65
SDHAF3-202ENST00000432641 PLEKHM2Q8IWE5 1019 aa25.33■■□□□ 1.65
SDHAF3-202ENST00000432641 AXIN2Q9Y2T1 843 aa25.33■■□□□ 1.65
SDHAF3-202ENST00000432641 SIPA1L3O60292 1781 aaPredicted RBP25.33■■□□□ 1.64
SDHAF3-202ENST00000432641 PXDNQ92626 1479 aa25.32■■□□□ 1.64
SDHAF3-202ENST00000432641 COL18A1P39060 1754 aa25.32■■□□□ 1.64
SDHAF3-202ENST00000432641 CDC45O75419 566 aa25.32■■□□□ 1.64
SDHAF3-202ENST00000432641 CRYBG1Q9Y4K1 1723 aa25.31■■□□□ 1.64
SDHAF3-202ENST00000432641 MPRIPQ6WCQ1 1025 aa25.3■■□□□ 1.64
SDHAF3-202ENST00000432641 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.3■■□□□ 1.64
SDHAF3-202ENST00000432641 TTC22Q5TAA0 569 aa25.29■■□□□ 1.64
SDHAF3-202ENST00000432641 RAPGEF4Q8WZA2 1011 aa25.28■■□□□ 1.64
SDHAF3-202ENST00000432641 NECTIN2Q92692 538 aa25.28■■□□□ 1.64
SDHAF3-202ENST00000432641 HEG1Q9ULI3 1381 aa25.28■■□□□ 1.64
SDHAF3-202ENST00000432641 ZC3H6P61129 1189 aaKnown RBP25.27■■□□□ 1.64
SDHAF3-202ENST00000432641 ATP8B2P98198 1209 aa25.27■■□□□ 1.64
SDHAF3-202ENST00000432641 TBC1D9Q6ZT07 1266 aa25.27■■□□□ 1.64
SDHAF3-202ENST00000432641 TBC1D2Q9BYX2 928 aa25.27■■□□□ 1.64
SDHAF3-202ENST00000432641 CPDO75976 1380 aa25.27■■□□□ 1.64
SDHAF3-202ENST00000432641 SPATA31A3Q5VYP0 1347 aa25.27■■□□□ 1.64
SDHAF3-202ENST00000432641 XIRP1Q702N8 1843 aaKnown RBP25.26■■□□□ 1.63
SDHAF3-202ENST00000432641 DBF4Q9UBU7 674 aaPredicted RBP25.25■■□□□ 1.63
SDHAF3-202ENST00000432641 SPG7Q9UQ90 795 aa25.25■■□□□ 1.63
SDHAF3-202ENST00000432641 TATP17735 454 aaPredicted RBP25.25■■□□□ 1.63
SDHAF3-202ENST00000432641 SRCIN1Q9C0H9 1055 aa25.25■■□□□ 1.63
SDHAF3-202ENST00000432641 OSBPL3Q9H4L5 887 aa25.25■■□□□ 1.63
SDHAF3-202ENST00000432641 SCN11AQ9UI33 1791 aa25.24■■□□□ 1.63
SDHAF3-202ENST00000432641 UBTFL1P0CB47 393 aaPredicted RBP25.24■■□□□ 1.63
SDHAF3-202ENST00000432641 GSPT1P15170 499 aaKnown RBP25.24■■□□□ 1.63
SDHAF3-202ENST00000432641 NFKBIBQ15653 356 aa25.24■■□□□ 1.63
SDHAF3-202ENST00000432641 EIF2S2P20042 333 aaKnown RBP25.24■■□□□ 1.63
SDHAF3-202ENST00000432641 PLEKHG5O94827 1062 aa25.23■■□□□ 1.63
SDHAF3-202ENST00000432641 CASC1Q6TDU7 716 aa25.23■■□□□ 1.63
SDHAF3-202ENST00000432641 PHAXQ9H814 394 aaKnown RBP25.23■■□□□ 1.63
SDHAF3-202ENST00000432641 CHPF2Q9P2E5 772 aa25.23■■□□□ 1.63
SDHAF3-202ENST00000432641 PRKCSHP14314 528 aaPredicted RBP25.22■■□□□ 1.63
SDHAF3-202ENST00000432641 USP44Q9H0E7 712 aa25.22■■□□□ 1.63
SDHAF3-202ENST00000432641 NLRP2Q9NX02 1062 aa25.22■■□□□ 1.63
SDHAF3-202ENST00000432641 SNX21Q969T3 373 aa25.22■■□□□ 1.63
SDHAF3-202ENST00000432641 GIGYF1O75420 1035 aaPredicted RBP25.21■■□□□ 1.63
SDHAF3-202ENST00000432641 DNAAF4Q8WXU2 420 aa25.21■■□□□ 1.63
SDHAF3-202ENST00000432641 HSCBQ8IWL3 235 aa25.21■■□□□ 1.63
SDHAF3-202ENST00000432641 KCNQ3O43525 872 aa25.2■■□□□ 1.62
SDHAF3-202ENST00000432641 HSPA2P54652 639 aa25.2■■□□□ 1.62
SDHAF3-202ENST00000432641 LRRCC1Q9C099 1032 aa25.2■■□□□ 1.62
SDHAF3-202ENST00000432641 HDAC5Q9UQL6 1122 aa25.2■■□□□ 1.62
SDHAF3-202ENST00000432641 IBTKQ9P2D0 1353 aaPredicted RBP25.2■■□□□ 1.62
SDHAF3-202ENST00000432641 PKD1L3Q7Z443 1732 aa25.19■■□□□ 1.62
SDHAF3-202ENST00000432641 STRCQ7RTU9 1775 aa25.19■■□□□ 1.62
SDHAF3-202ENST00000432641 C16orf71Q8IYS4 520 aaPredicted RBP25.19■■□□□ 1.62
SDHAF3-202ENST00000432641 LRRFIP2Q9Y608 721 aaKnown RBP25.19■■□□□ 1.62
SDHAF3-202ENST00000432641 HYPKQ9NX55 129 aa25.18■■□□□ 1.62
SDHAF3-202ENST00000432641 CSB-PGBD3P0DP91 1061 aa25.17■■□□□ 1.62
SDHAF3-202ENST00000432641 IFNL2Q8IZJ0 200 aa25.17■■□□□ 1.62
SDHAF3-202ENST00000432641 DDX17Q92841 729 aaKnown RBP25.17■■□□□ 1.62
SDHAF3-202ENST00000432641 ANTXR1Q9H6X2 564 aa25.17■■□□□ 1.62
SDHAF3-202ENST00000432641 MRC1P22897 1456 aa25.17■■□□□ 1.62
SDHAF3-202ENST00000432641 SMARCA5O60264 1052 aaPredicted RBP25.17■■□□□ 1.62
SDHAF3-202ENST00000432641 BEND3Q5T5X7 828 aa25.17■■□□□ 1.62
SDHAF3-202ENST00000432641 SSH3Q8TE77 659 aa25.17■■□□□ 1.62
SDHAF3-202ENST00000432641 HSP90AB1P08238 724 aaKnown RBP25.16■■□□□ 1.62
SDHAF3-202ENST00000432641 PHKG2P15735 406 aa25.16■■□□□ 1.62
SDHAF3-202ENST00000432641 MEGF6O75095 1541 aa25.16■■□□□ 1.62
SDHAF3-202ENST00000432641 PI4KAP2A4QPH2 592 aa25.16■■□□□ 1.62
SDHAF3-202ENST00000432641 RAB11FIP3O75154 756 aa25.16■■□□□ 1.62
SDHAF3-202ENST00000432641 BRINP3Q76B58 766 aa25.16■■□□□ 1.62
SDHAF3-202ENST00000432641 PI4KAP1Q8N8J0 262 aa25.16■■□□□ 1.62
SDHAF3-202ENST00000432641 SLC52A2Q9HAB3 445 aa25.16■■□□□ 1.62
SDHAF3-202ENST00000432641 ALDH1L1O75891 902 aa25.15■■□□□ 1.62
SDHAF3-202ENST00000432641 PDE1AP54750 535 aa25.15■■□□□ 1.62
SDHAF3-202ENST00000432641 ADCY9O60503 1353 aa25.14■■□□□ 1.62
SDHAF3-202ENST00000432641 PNMA6EA0A0J9YXQ4 647 aa25.14■■□□□ 1.62
SDHAF3-202ENST00000432641 APBB1O00213 710 aa25.14■■□□□ 1.62
SDHAF3-202ENST00000432641 KDM6AO15550 1401 aaPredicted RBP25.14■■□□□ 1.62
SDHAF3-202ENST00000432641 AOX1Q06278 1338 aa25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms