RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 ATMINO43313 823 aaPredicted RBP10.11□□□□□ -0.79
VTI1A-202ENST00000432306 BCAR3O75815 825 aa10.11□□□□□ -0.79
VTI1A-202ENST00000432306 BRD1O95696 1058 aa10.11□□□□□ -0.79
VTI1A-202ENST00000432306 CLCN6P51797 869 aa10.11□□□□□ -0.79
VTI1A-202ENST00000432306 CENPJQ9HC77 1338 aaPredicted RBP10.11□□□□□ -0.79
VTI1A-202ENST00000432306 MST1RQ04912 1400 aa10.11□□□□□ -0.79
VTI1A-202ENST00000432306 PDCD7Q8N8D1 485 aaKnown RBP10.1□□□□□ -0.79
VTI1A-202ENST00000432306 CHMP5Q9NZZ3 219 aa10.1□□□□□ -0.79
VTI1A-202ENST00000432306 PNPLA6Q8IY17 1366 aa10.1□□□□□ -0.79
VTI1A-202ENST00000432306 XRN1Q8IZH2 1706 aaKnown RBP10.1□□□□□ -0.79
VTI1A-202ENST00000432306 APAF1O14727 1248 aa10.1□□□□□ -0.79
VTI1A-202ENST00000432306 DDIT3P35638 169 aa10.1□□□□□ -0.79
VTI1A-202ENST00000432306 MCM6Q14566 821 aa10.1□□□□□ -0.79
VTI1A-202ENST00000432306 NOL8Q76FK4 1167 aaKnown RBP10.1□□□□□ -0.79
VTI1A-202ENST00000432306 ASTLQ6HA08 431 aaPredicted RBP10.09□□□□□ -0.79
VTI1A-202ENST00000432306 DDX27Q96GQ7 796 aaKnown RBP10.09□□□□□ -0.79
VTI1A-202ENST00000432306 NAP1L5Q96NT1 182 aaPredicted RBP10.09□□□□□ -0.79
VTI1A-202ENST00000432306 SETBP1Q9Y6X0 1596 aa10.08□□□□□ -0.8
VTI1A-202ENST00000432306 MYOM2P54296 1465 aa10.08□□□□□ -0.8
VTI1A-202ENST00000432306 LOC102724159A0A0B4J2E5 919 aa10.08□□□□□ -0.8
VTI1A-202ENST00000432306 CT47B1P0C2W7 299 aaPredicted RBP10.08□□□□□ -0.8
VTI1A-202ENST00000432306 PWP2Q15269 919 aaKnown RBP10.08□□□□□ -0.8
VTI1A-202ENST00000432306 RGL3Q3MIN7 710 aa10.08□□□□□ -0.8
VTI1A-202ENST00000432306 WDR63Q8IWG1 891 aa10.08□□□□□ -0.8
VTI1A-202ENST00000432306 WWC1Q8IX03 1113 aa10.08□□□□□ -0.8
VTI1A-202ENST00000432306 EXOC8Q8IYI6 725 aa10.08□□□□□ -0.8
VTI1A-202ENST00000432306 DRC1Q96MC2 740 aa10.08□□□□□ -0.8
VTI1A-202ENST00000432306 PNNQ9H307 717 aaKnown RBP10.08□□□□□ -0.8
VTI1A-202ENST00000432306 GOPCQ9HD26 462 aa10.08□□□□□ -0.8
VTI1A-202ENST00000432306 PLSCR2Q9NRY7 297 aa10.08□□□□□ -0.8
VTI1A-202ENST00000432306 TRPC5Q9UL62 973 aaPredicted RBP10.08□□□□□ -0.8
VTI1A-202ENST00000432306 PTPRUQ92729 1446 aa10.08□□□□□ -0.8
VTI1A-202ENST00000432306 DDX11L8A8MPP1 907 aa10.07□□□□□ -0.8
VTI1A-202ENST00000432306 RARSP54136 660 aaKnown RBP10.07□□□□□ -0.8
VTI1A-202ENST00000432306 USP21Q9UK80 565 aa10.07□□□□□ -0.8
VTI1A-202ENST00000432306 RIPOR2Q9Y4F9 1068 aa10.07□□□□□ -0.8
VTI1A-202ENST00000432306 ZC3H4Q9UPT8 1303 aaKnown RBP10.07□□□□□ -0.8
VTI1A-202ENST00000432306 A0A0U1RQG5 324 aaPredicted RBP10.07□□□□□ -0.8
VTI1A-202ENST00000432306 ADAMTS2O95450 1211 aa10.07□□□□□ -0.8
VTI1A-202ENST00000432306 PTMSP20962 102 aa10.07□□□□□ -0.8
VTI1A-202ENST00000432306 IRX5P78411 483 aaPredicted RBP10.07□□□□□ -0.8
VTI1A-202ENST00000432306 SNX21Q969T3 373 aa10.07□□□□□ -0.8
VTI1A-202ENST00000432306 PTCH1Q13635 1447 aa10.07□□□□□ -0.8
VTI1A-202ENST00000432306 USP32Q8NFA0 1604 aa10.06□□□□□ -0.8
VTI1A-202ENST00000432306 SLKQ9H2G2 1235 aaPredicted RBP10.06□□□□□ -0.8
VTI1A-202ENST00000432306 RWDD1Q9H446 243 aaPredicted RBP10.06□□□□□ -0.8
VTI1A-202ENST00000432306 ADGRL3Q9HAR2 1447 aa10.06□□□□□ -0.8
VTI1A-202ENST00000432306 RBM47A0AV96 593 aaKnown RBP10.05□□□□□ -0.8
VTI1A-202ENST00000432306 MICALL2Q8IY33 904 aa10.05□□□□□ -0.8
VTI1A-202ENST00000432306 NALCNQ8IZF0 1738 aa10.05□□□□□ -0.8
VTI1A-202ENST00000432306 PCDHB15Q9Y5E8 787 aa10.05□□□□□ -0.8
VTI1A-202ENST00000432306 NRXN3Q9Y4C0 1643 aa10.05□□□□□ -0.8
VTI1A-202ENST00000432306 NRXN1Q9ULB1 1477 aa10.05□□□□□ -0.8
VTI1A-202ENST00000432306 IBTKQ9P2D0 1353 aaPredicted RBP10.05□□□□□ -0.8
VTI1A-202ENST00000432306 MARF1Q9Y4F3 1742 aaKnown RBP10.05□□□□□ -0.8
VTI1A-202ENST00000432306 ATRNO75882 1429 aa10.05□□□□□ -0.8
VTI1A-202ENST00000432306 MAFGO15525 162 aa10.04□□□□□ -0.8
VTI1A-202ENST00000432306 GABBR2O75899 941 aa10.04□□□□□ -0.8
VTI1A-202ENST00000432306 TERF1P54274 439 aa10.04□□□□□ -0.8
VTI1A-202ENST00000432306 HDAC1Q13547 482 aaPredicted RBP10.04□□□□□ -0.8
VTI1A-202ENST00000432306 CAMK2BQ13554 666 aa10.04□□□□□ -0.8
VTI1A-202ENST00000432306 SND1Q7KZF4 910 aaKnown RBP eCLIP10.04□□□□□ -0.8
VTI1A-202ENST00000432306 PDZRN3Q9UPQ7 1066 aa10.04□□□□□ -0.8
VTI1A-202ENST00000432306 COG6Q9Y2V7 657 aa10.04□□□□□ -0.8
VTI1A-202ENST00000432306 CLEC17AQ6ZS10 378 aa10.04□□□□□ -0.8
VTI1A-202ENST00000432306 PLCD4Q9BRC7 762 aa10.04□□□□□ -0.8
VTI1A-202ENST00000432306 GRPEL1Q9HAV7 217 aa10.04□□□□□ -0.8
VTI1A-202ENST00000432306 COL22A1Q8NFW1 1626 aaPredicted RBP10.03□□□□□ -0.8
VTI1A-202ENST00000432306 SRCAPQ6ZRS2 3230 aa10.03□□□□□ -0.8
VTI1A-202ENST00000432306 ESPNB1AK53 854 aa10.03□□□□□ -0.8
VTI1A-202ENST00000432306 HSP90AA1P07900 732 aaKnown RBP10.03□□□□□ -0.8
VTI1A-202ENST00000432306 TPM2P07951 284 aa10.03□□□□□ -0.8
VTI1A-202ENST00000432306 HSP90AA2PQ14568 343 aaPredicted RBP10.03□□□□□ -0.8
VTI1A-202ENST00000432306 SMC5Q8IY18 1101 aa10.03□□□□□ -0.8
VTI1A-202ENST00000432306 PANK1Q8TE04 598 aa10.03□□□□□ -0.8
VTI1A-202ENST00000432306 DDX17Q92841 729 aaKnown RBP10.03□□□□□ -0.8
VTI1A-202ENST00000432306 MYH16Q9H6N6 1097 aa10.03□□□□□ -0.8
VTI1A-202ENST00000432306 GPHNQ9NQX3 736 aaPredicted RBP10.03□□□□□ -0.8
VTI1A-202ENST00000432306 ADGRB2O60241 1585 aa10.03□□□□□ -0.8
VTI1A-202ENST00000432306 LRP5O75197 1615 aa10.03□□□□□ -0.8
VTI1A-202ENST00000432306 ANKRD62A6NC57 917 aa10.02□□□□□ -0.8
VTI1A-202ENST00000432306 SKOR2Q2VWA4 1001 aaPredicted RBP10.02□□□□□ -0.8
VTI1A-202ENST00000432306 IER5LQ5T953 404 aa10.02□□□□□ -0.8
VTI1A-202ENST00000432306 CCDC146Q8IYE0 955 aa10.02□□□□□ -0.8
VTI1A-202ENST00000432306 RUNDC1Q96C34 613 aa10.02□□□□□ -0.8
VTI1A-202ENST00000432306 C1orf167Q5SNV9 1468 aa10.02□□□□□ -0.81
VTI1A-202ENST00000432306 MVPQ14764 893 aaKnown RBP10.02□□□□□ -0.81
VTI1A-202ENST00000432306 PPP1R15BQ5SWA1 713 aa10.02□□□□□ -0.81
VTI1A-202ENST00000432306 SREK1Q8WXA9 508 aaKnown RBP10.02□□□□□ -0.81
VTI1A-202ENST00000432306 PANK2Q9BZ23 570 aa10.02□□□□□ -0.81
VTI1A-202ENST00000432306 C22orf23Q9BZE7 217 aa10.02□□□□□ -0.81
VTI1A-202ENST00000432306 OCEL1Q9H607 264 aa10.02□□□□□ -0.81
VTI1A-202ENST00000432306 SOS2Q07890 1332 aaPredicted RBP10.01□□□□□ -0.81
VTI1A-202ENST00000432306 CLTCL1P53675 1640 aa10.01□□□□□ -0.81
VTI1A-202ENST00000432306 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.01□□□□□ -0.81
VTI1A-202ENST00000432306 RLBP1P12271 317 aa10.01□□□□□ -0.81
VTI1A-202ENST00000432306 MARCH6O60337 910 aa10□□□□□ -0.81
VTI1A-202ENST00000432306 HSP90AB4PQ58FF6 505 aa10□□□□□ -0.81
VTI1A-202ENST00000432306 GPIHBP1Q8IV16 184 aa10□□□□□ -0.81
VTI1A-202ENST00000432306 PPP1R9BQ96SB3 815 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms