RNA–Protein interactions for RNA: ENST00000430617.6

ATG4B-212, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 623 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-212ENST00000430617 MAP3K19Q56UN5 1328 aa14.21□□□□□ -0.13
ATG4B-212ENST00000430617 GNPATO15228 680 aa14.21□□□□□ -0.13
ATG4B-212ENST00000430617 FOXN1O15353 648 aa14.21□□□□□ -0.13
ATG4B-212ENST00000430617 HMGB2P26583 209 aaKnown RBP14.21□□□□□ -0.13
ATG4B-212ENST00000430617 NBPF6Q5VWK0 638 aa14.21□□□□□ -0.13
ATG4B-212ENST00000430617 NBPF4Q96M43 638 aa14.21□□□□□ -0.13
ATG4B-212ENST00000430617 EDC4Q6P2E9 1401 aaKnown RBP14.21□□□□□ -0.13
ATG4B-212ENST00000430617 ITPK1Q13572 414 aa14.2□□□□□ -0.14
ATG4B-212ENST00000430617 DCAF5Q96JK2 942 aa14.2□□□□□ -0.14
ATG4B-212ENST00000430617 TNRC18O15417 2968 aaPredicted RBP14.2□□□□□ -0.14
ATG4B-212ENST00000430617 DLEC1Q9Y238 1755 aa14.19□□□□□ -0.14
ATG4B-212ENST00000430617 CYP27B1O15528 508 aa14.19□□□□□ -0.14
ATG4B-212ENST00000430617 PIGBQ92521 554 aa14.19□□□□□ -0.14
ATG4B-212ENST00000430617 SMARCC1Q92922 1105 aaPredicted RBP14.19□□□□□ -0.14
ATG4B-212ENST00000430617 AFDNP55196 1824 aaKnown RBP14.19□□□□□ -0.14
ATG4B-212ENST00000430617 CGNL1Q0VF96 1302 aa14.18□□□□□ -0.14
ATG4B-212ENST00000430617 LOC102724428A0A0B4J2F2 783 aa14.18□□□□□ -0.14
ATG4B-212ENST00000430617 SIK1P57059 783 aa14.18□□□□□ -0.14
ATG4B-212ENST00000430617 PCDH11XQ9BZA7 1347 aa14.17□□□□□ -0.14
ATG4B-212ENST00000430617 PCDH11YQ9BZA8 1340 aa14.17□□□□□ -0.14
ATG4B-212ENST00000430617 ZNF831Q5JPB2 1677 aa14.17□□□□□ -0.14
ATG4B-212ENST00000430617 SLC12A5Q9H2X9 1139 aa14.17□□□□□ -0.14
ATG4B-212ENST00000430617 MKRN1Q9UHC7 482 aaKnown RBP14.17□□□□□ -0.14
ATG4B-212ENST00000430617 A0A1W2PP64 1363 aa14.17□□□□□ -0.14
ATG4B-212ENST00000430617 AMPHP49418 695 aa14.16□□□□□ -0.14
ATG4B-212ENST00000430617 TMF1P82094 1093 aa14.16□□□□□ -0.14
ATG4B-212ENST00000430617 TMC1Q8TDI8 760 aa14.16□□□□□ -0.14
ATG4B-212ENST00000430617 RAPGEF4Q8WZA2 1011 aa14.16□□□□□ -0.14
ATG4B-212ENST00000430617 PRDM10Q9NQV6 1147 aa14.16□□□□□ -0.14
ATG4B-212ENST00000430617 CCDC87Q9NVE4 849 aa14.16□□□□□ -0.14
ATG4B-212ENST00000430617 PIM2Q9P1W9 311 aa14.16□□□□□ -0.14
ATG4B-212ENST00000430617 KDM6AO15550 1401 aaPredicted RBP14.15□□□□□ -0.14
ATG4B-212ENST00000430617 VEGFAP15692 232 aaPredicted RBP14.15□□□□□ -0.14
ATG4B-212ENST00000430617 TATP17735 454 aaPredicted RBP14.15□□□□□ -0.14
ATG4B-212ENST00000430617 DALRD3Q5D0E6 543 aaKnown RBP14.15□□□□□ -0.14
ATG4B-212ENST00000430617 NLGN1Q8N2Q7 840 aa14.15□□□□□ -0.14
ATG4B-212ENST00000430617 POTECB2RU33 542 aa14.14□□□□□ -0.15
ATG4B-212ENST00000430617 GYS1P13807 737 aa14.14□□□□□ -0.15
ATG4B-212ENST00000430617 ATP6V1AP38606 617 aa14.14□□□□□ -0.15
ATG4B-212ENST00000430617 RASSF7Q02833 373 aa14.14□□□□□ -0.15
ATG4B-212ENST00000430617 HDGFL2Q7Z4V5 671 aaPredicted RBP14.14□□□□□ -0.15
ATG4B-212ENST00000430617 L3MBTL2Q969R5 705 aa14.14□□□□□ -0.15
ATG4B-212ENST00000430617 ASAP1Q9ULH1 1129 aa14.14□□□□□ -0.15
ATG4B-212ENST00000430617 GLTPD2A6NH11 291 aa14.13□□□□□ -0.15
ATG4B-212ENST00000430617 ABHD8Q96I13 439 aa14.13□□□□□ -0.15
ATG4B-212ENST00000430617 CHRNA5P30532 468 aa14.12□□□□□ -0.15
ATG4B-212ENST00000430617 RRS1Q15050 365 aaKnown RBP14.12□□□□□ -0.15
ATG4B-212ENST00000430617 TRAPPC3LQ5T215 181 aa14.12□□□□□ -0.15
ATG4B-212ENST00000430617 ARHGEF1Q92888 912 aaKnown RBP14.12□□□□□ -0.15
ATG4B-212ENST00000430617 PARP3Q9Y6F1 533 aa14.12□□□□□ -0.15
ATG4B-212ENST00000430617 ADAMTS7Q9UKP4 1686 aa14.11□□□□□ -0.15
ATG4B-212ENST00000430617 CACNA1SQ13698 1873 aa14.11□□□□□ -0.15
ATG4B-212ENST00000430617 FER1L6Q2WGJ9 1857 aa14.11□□□□□ -0.15
ATG4B-212ENST00000430617 CREBZFQ9NS37 354 aa14.11□□□□□ -0.15
ATG4B-212ENST00000430617 ZC3H4Q9UPT8 1303 aaKnown RBP14.11□□□□□ -0.15
ATG4B-212ENST00000430617 KIF20BQ96Q89 1820 aa14.11□□□□□ -0.15
ATG4B-212ENST00000430617 PDE4DIPQ5VU43 2346 aa14.1□□□□□ -0.15
ATG4B-212ENST00000430617 RTL1A6NKG5 1358 aa14.1□□□□□ -0.15
ATG4B-212ENST00000430617 ROCK2O75116 1388 aaKnown RBP14.1□□□□□ -0.15
ATG4B-212ENST00000430617 CTCFP49711 727 aaPredicted RBP14.1□□□□□ -0.15
ATG4B-212ENST00000430617 LBX1P52954 281 aa14.1□□□□□ -0.15
ATG4B-212ENST00000430617 RTCBQ9Y3I0 505 aaKnown RBP14.1□□□□□ -0.15
ATG4B-212ENST00000430617 KDRP35968 1356 aa14.09□□□□□ -0.15
ATG4B-212ENST00000430617 CNTNAP1P78357 1384 aa14.09□□□□□ -0.15
ATG4B-212ENST00000430617 MLLT1Q03111 559 aaPredicted RBP14.09□□□□□ -0.15
ATG4B-212ENST00000430617 NKX1-1Q15270 411 aaPredicted RBP14.09□□□□□ -0.15
ATG4B-212ENST00000430617 COG3Q96JB2 828 aa14.09□□□□□ -0.15
ATG4B-212ENST00000430617 SLC4A9Q96Q91 983 aa14.09□□□□□ -0.15
ATG4B-212ENST00000430617 SMG6Q86US8 1419 aaKnown RBP14.08□□□□□ -0.15
ATG4B-212ENST00000430617 NRXN2Q9P2S2 1712 aa14.08□□□□□ -0.16
ATG4B-212ENST00000430617 DDR1Q08345 913 aa14.08□□□□□ -0.16
ATG4B-212ENST00000430617 ATG3Q9NT62 314 aa14.08□□□□□ -0.16
ATG4B-212ENST00000430617 TERF2IPQ9NYB0 399 aa14.08□□□□□ -0.16
ATG4B-212ENST00000430617 POTEIP0CG38 1075 aa14.07□□□□□ -0.16
ATG4B-212ENST00000430617 POTEJP0CG39 1038 aa14.07□□□□□ -0.16
ATG4B-212ENST00000430617 HSP90AB2PQ58FF8 381 aa14.07□□□□□ -0.16
ATG4B-212ENST00000430617 TMOD3Q9NYL9 352 aa14.07□□□□□ -0.16
ATG4B-212ENST00000430617 TJP1Q07157 1748 aa14.07□□□□□ -0.16
ATG4B-212ENST00000430617 LMNB1P20700 586 aa14.06□□□□□ -0.16
ATG4B-212ENST00000430617 RFC4P35249 363 aa14.06□□□□□ -0.16
ATG4B-212ENST00000430617 VEGFBP49765 207 aa14.06□□□□□ -0.16
ATG4B-212ENST00000430617 RGS19P49795 217 aa14.06□□□□□ -0.16
ATG4B-212ENST00000430617 AIDAQ96BJ3 306 aa14.06□□□□□ -0.16
ATG4B-212ENST00000430617 SCN4AP35499 1836 aa14.06□□□□□ -0.16
ATG4B-212ENST00000430617 ANKRD31Q8N7Z5 1873 aa14.06□□□□□ -0.16
ATG4B-212ENST00000430617 ADRA2BP18089 450 aa14.05□□□□□ -0.16
ATG4B-212ENST00000430617 FKBP8Q14318 412 aa14.05□□□□□ -0.16
ATG4B-212ENST00000430617 WBP1LQ9NX94 342 aa14.05□□□□□ -0.16
ATG4B-212ENST00000430617 SRP68Q9UHB9 627 aaKnown RBP14.05□□□□□ -0.16
ATG4B-212ENST00000430617 INSRP06213 1382 aa14.05□□□□□ -0.16
ATG4B-212ENST00000430617 CASP8AP2Q9UKL3 1982 aa14.04□□□□□ -0.16
ATG4B-212ENST00000430617 CCDC85CA6NKD9 419 aa14.04□□□□□ -0.16
ATG4B-212ENST00000430617 RPS6KA4O75676 772 aa14.04□□□□□ -0.16
ATG4B-212ENST00000430617 HSPA8P11142 646 aaKnown RBP14.04□□□□□ -0.16
ATG4B-212ENST00000430617 CHADLQ6NUI6 762 aa14.04□□□□□ -0.16
ATG4B-212ENST00000430617 NCAPD2Q15021 1401 aa14.04□□□□□ -0.16
ATG4B-212ENST00000430617 ANKRD26Q9UPS8 1709 aa14.04□□□□□ -0.16
ATG4B-212ENST00000430617 RC3H1Q5TC82 1133 aaKnown RBP14.03□□□□□ -0.16
ATG4B-212ENST00000430617 PASKQ96RG2 1323 aa14.02□□□□□ -0.17
ATG4B-212ENST00000430617 CNTNAP4Q9C0A0 1308 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms