RNA–Protein interactions for RNA: ENST00000429751.6

RRN3-203, Transcript of RRN3 homolog, RNA polymerase I transcription factor, humanhuman

TSL 2 BASIC

Gene RRN3, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRN3-203ENST00000429751 IGSF1Q8N6C5 1336 aa10.19□□□□□ -0.78
RRN3-203ENST00000429751 DDX11L8A8MPP1 907 aa10.19□□□□□ -0.78
RRN3-203ENST00000429751 RBM6P78332 1123 aaKnown RBP10.19□□□□□ -0.78
RRN3-203ENST00000429751 ZKSCAN2Q63HK3 967 aa10.19□□□□□ -0.78
RRN3-203ENST00000429751 QTRT2Q9H974 415 aaKnown RBP10.19□□□□□ -0.78
RRN3-203ENST00000429751 NLRP2Q9NX02 1062 aa10.19□□□□□ -0.78
RRN3-203ENST00000429751 CT47B1P0C2W7 299 aaPredicted RBP10.18□□□□□ -0.78
RRN3-203ENST00000429751 MFAP1P55081 439 aaKnown RBP10.18□□□□□ -0.78
RRN3-203ENST00000429751 DZIP1LQ8IYY4 767 aaKnown RBP10.18□□□□□ -0.78
RRN3-203ENST00000429751 GJD4Q96KN9 370 aaPredicted RBP10.18□□□□□ -0.78
RRN3-203ENST00000429751 NAP1L5Q96NT1 182 aaPredicted RBP10.18□□□□□ -0.78
RRN3-203ENST00000429751 KDRP35968 1356 aa10.18□□□□□ -0.78
RRN3-203ENST00000429751 HDAC1Q13547 482 aaPredicted RBP10.18□□□□□ -0.78
RRN3-203ENST00000429751 LARP1Q6PKG0 1096 aaKnown RBP10.18□□□□□ -0.78
RRN3-203ENST00000429751 HSCBQ8IWL3 235 aa10.18□□□□□ -0.78
RRN3-203ENST00000429751 FTSJ3Q8IY81 847 aaKnown RBP10.17□□□□□ -0.78
RRN3-203ENST00000429751 LTV1Q96GA3 475 aaPredicted RBP10.17□□□□□ -0.78
RRN3-203ENST00000429751 EYA1Q99502 592 aa10.17□□□□□ -0.78
RRN3-203ENST00000429751 GRPEL1Q9HAV7 217 aa10.17□□□□□ -0.78
RRN3-203ENST00000429751 CCDC9Q9Y3X0 531 aaKnown RBP10.17□□□□□ -0.78
RRN3-203ENST00000429751 GLI3P10071 1580 aa10.17□□□□□ -0.78
RRN3-203ENST00000429751 THSD7AQ9UPZ6 1657 aa10.17□□□□□ -0.78
RRN3-203ENST00000429751 ONECUT3O60422 494 aaPredicted RBP10.16□□□□□ -0.78
RRN3-203ENST00000429751 FCHSD2O94868 740 aa10.16□□□□□ -0.78
RRN3-203ENST00000429751 DDIT3P35638 169 aa10.16□□□□□ -0.78
RRN3-203ENST00000429751 GLIPR1L2Q4G1C9 344 aa10.16□□□□□ -0.78
RRN3-203ENST00000429751 RAPGEF4Q8WZA2 1011 aa10.16□□□□□ -0.78
RRN3-203ENST00000429751 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.16□□□□□ -0.78
RRN3-203ENST00000429751 PKD1L3Q7Z443 1732 aa10.16□□□□□ -0.78
RRN3-203ENST00000429751 NBPF6Q5VWK0 638 aa10.16□□□□□ -0.78
RRN3-203ENST00000429751 NBPF4Q96M43 638 aa10.16□□□□□ -0.78
RRN3-203ENST00000429751 DISP2A7MBM2 1401 aa10.15□□□□□ -0.78
RRN3-203ENST00000429751 IL2RBP14784 551 aa10.15□□□□□ -0.78
RRN3-203ENST00000429751 TATP17735 454 aaPredicted RBP10.15□□□□□ -0.78
RRN3-203ENST00000429751 RXRBP28702 533 aa10.15□□□□□ -0.78
RRN3-203ENST00000429751 RBM25P49756 843 aaKnown RBP10.15□□□□□ -0.79
RRN3-203ENST00000429751 AMOTQ4VCS5 1084 aa10.15□□□□□ -0.79
RRN3-203ENST00000429751 SMC5Q8IY18 1101 aa10.15□□□□□ -0.79
RRN3-203ENST00000429751 SNX21Q969T3 373 aa10.15□□□□□ -0.79
RRN3-203ENST00000429751 DDX19BQ9UMR2 479 aa10.15□□□□□ -0.79
RRN3-203ENST00000429751 U2SURPO15042 1029 aaKnown RBP10.14□□□□□ -0.79
RRN3-203ENST00000429751 HSP90AA1P07900 732 aaKnown RBP10.14□□□□□ -0.79
RRN3-203ENST00000429751 U2AF1L5P0DN76 240 aaPredicted RBP10.14□□□□□ -0.79
RRN3-203ENST00000429751 U2AF1Q01081 240 aaKnown RBP eCLIP10.14□□□□□ -0.79
RRN3-203ENST00000429751 OVOS2A0A0G2JMS6 1433 aa10.14□□□□□ -0.79
RRN3-203ENST00000429751 RRP9O43818 475 aaKnown RBP10.14□□□□□ -0.79
RRN3-203ENST00000429751 RGS17Q9UGC6 210 aaPredicted RBP10.14□□□□□ -0.79
RRN3-203ENST00000429751 CIZ1Q9ULV3 898 aaPredicted RBP10.14□□□□□ -0.79
RRN3-203ENST00000429751 ESPNB1AK53 854 aa10.13□□□□□ -0.79
RRN3-203ENST00000429751 TRIM27P14373 513 aa10.13□□□□□ -0.79
RRN3-203ENST00000429751 PLEKHO1Q53GL0 409 aaPredicted RBP10.13□□□□□ -0.79
RRN3-203ENST00000429751 SULT6B1Q6IMI4 303 aa10.13□□□□□ -0.79
RRN3-203ENST00000429751 SMC4Q9NTJ3 1288 aa10.13□□□□□ -0.79
RRN3-203ENST00000429751 SPG7Q9UQ90 795 aa10.13□□□□□ -0.79
RRN3-203ENST00000429751 TNS2Q63HR2 1409 aa10.13□□□□□ -0.79
RRN3-203ENST00000429751 LRRC37A3O60309 1634 aa10.13□□□□□ -0.79
RRN3-203ENST00000429751 PTMSP20962 102 aa10.12□□□□□ -0.79
RRN3-203ENST00000429751 SKOR2Q2VWA4 1001 aaPredicted RBP10.12□□□□□ -0.79
RRN3-203ENST00000429751 HSP90AA2PQ14568 343 aaPredicted RBP10.12□□□□□ -0.79
RRN3-203ENST00000429751 ATF7IPQ6VMQ6 1270 aa10.12□□□□□ -0.79
RRN3-203ENST00000429751 ITPRIPQ8IWB1 547 aa10.12□□□□□ -0.79
RRN3-203ENST00000429751 GBP4Q96PP9 640 aa10.12□□□□□ -0.79
RRN3-203ENST00000429751 EXOC5O00471 708 aa10.11□□□□□ -0.79
RRN3-203ENST00000429751 EXOSC9Q06265 439 aaKnown RBP10.11□□□□□ -0.79
RRN3-203ENST00000429751 GAS2L2Q8NHY3 880 aa10.11□□□□□ -0.79
RRN3-203ENST00000429751 TNPO1Q92973 898 aaKnown RBP10.11□□□□□ -0.79
RRN3-203ENST00000429751 TSR2Q969E8 191 aaKnown RBP10.11□□□□□ -0.79
RRN3-203ENST00000429751 PCDH11XQ9BZA7 1347 aa10.11□□□□□ -0.79
RRN3-203ENST00000429751 PCDH11YQ9BZA8 1340 aa10.11□□□□□ -0.79
RRN3-203ENST00000429751 HSP90AB1P08238 724 aaKnown RBP10.11□□□□□ -0.79
RRN3-203ENST00000429751 NUCB1Q02818 461 aa10.11□□□□□ -0.79
RRN3-203ENST00000429751 RAB3GAP1Q15042 981 aa10.11□□□□□ -0.79
RRN3-203ENST00000429751 DDB1Q16531 1140 aa10.11□□□□□ -0.79
RRN3-203ENST00000429751 FAM98CQ17RN3 349 aaKnown RBP10.11□□□□□ -0.79
RRN3-203ENST00000429751 POTEAQ6S8J7 498 aa10.11□□□□□ -0.79
RRN3-203ENST00000429751 ZCRB1Q8TBF4 217 aaKnown RBP10.11□□□□□ -0.79
RRN3-203ENST00000429751 SSH1Q8WYL5 1049 aa10.11□□□□□ -0.79
RRN3-203ENST00000429751 MEGF6O75095 1541 aa10.11□□□□□ -0.79
RRN3-203ENST00000429751 SHANK3Q9BYB0 1731 aa10.1□□□□□ -0.79
RRN3-203ENST00000429751 IL16Q14005 1332 aa10.1□□□□□ -0.79
RRN3-203ENST00000429751 ERBB4Q15303 1308 aa10.1□□□□□ -0.79
RRN3-203ENST00000429751 BCL9O00512 1426 aa10.1□□□□□ -0.79
RRN3-203ENST00000429751 TRIM44Q96DX7 344 aaPredicted RBP10.1□□□□□ -0.79
RRN3-203ENST00000429751 ZBTB40Q9NUA8 1239 aa10.1□□□□□ -0.79
RRN3-203ENST00000429751 BRWD3Q6RI45 1802 aa10.1□□□□□ -0.79
RRN3-203ENST00000429751 USHBP1Q8N6Y0 703 aa10.09□□□□□ -0.79
RRN3-203ENST00000429751 NOB1Q9ULX3 412 aaKnown RBP10.09□□□□□ -0.79
RRN3-203ENST00000429751 HMOX1P09601 288 aa10.09□□□□□ -0.79
RRN3-203ENST00000429751 PRKAR2BP31323 418 aa10.09□□□□□ -0.79
RRN3-203ENST00000429751 GAS2L3Q86XJ1 694 aa10.09□□□□□ -0.79
RRN3-203ENST00000429751 SEPT12Q8IYM1 358 aa10.09□□□□□ -0.79
RRN3-203ENST00000429751 TMEM57Q8N5G2 664 aa10.09□□□□□ -0.79
RRN3-203ENST00000429751 PLEKHF1Q96S99 279 aa10.09□□□□□ -0.79
RRN3-203ENST00000429751 KIF16BQ96L93 1317 aa10.09□□□□□ -0.79
RRN3-203ENST00000429751 HTATSF1O43719 755 aaKnown RBP10.08□□□□□ -0.8
RRN3-203ENST00000429751 TMPOP42166 694 aaKnown RBP10.08□□□□□ -0.8
RRN3-203ENST00000429751 AEBP1Q8IUX7 1158 aa10.08□□□□□ -0.8
RRN3-203ENST00000429751 IFNL2Q8IZJ0 200 aa10.08□□□□□ -0.8
RRN3-203ENST00000429751 TRIM35Q9UPQ4 493 aa10.08□□□□□ -0.8
RRN3-203ENST00000429751 RGS12O14924 1447 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms