RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 MRC1P22897 1456 aa19.66■□□□□ 0.74
GARNL3-204ENST00000429629 ADAMTS7Q9UKP4 1686 aa19.65■□□□□ 0.74
GARNL3-204ENST00000429629 MCM10Q7L590 875 aa19.65■□□□□ 0.74
GARNL3-204ENST00000429629 TRIM35Q9UPQ4 493 aa19.65■□□□□ 0.74
GARNL3-204ENST00000429629 EZH2Q15910 746 aaKnown RBP19.64■□□□□ 0.73
GARNL3-204ENST00000429629 ASAP1Q9ULH1 1129 aa19.64■□□□□ 0.73
GARNL3-204ENST00000429629 SBF2Q86WG5 1849 aa19.63■□□□□ 0.73
GARNL3-204ENST00000429629 CALD1Q05682 793 aaKnown RBP19.63■□□□□ 0.73
GARNL3-204ENST00000429629 PALLDQ8WX93 1383 aa19.62■□□□□ 0.73
GARNL3-204ENST00000429629 DCTN1Q14203 1278 aa19.61■□□□□ 0.73
GARNL3-204ENST00000429629 NEUROD2Q15784 382 aa19.61■□□□□ 0.73
GARNL3-204ENST00000429629 ZNF790Q6PG37 636 aa19.61■□□□□ 0.73
GARNL3-204ENST00000429629 VSIG10Q8N0Z9 540 aa19.61■□□□□ 0.73
GARNL3-204ENST00000429629 RRP7AQ9Y3A4 280 aaKnown RBP19.61■□□□□ 0.73
GARNL3-204ENST00000429629 TNS1Q9HBL0 1735 aaKnown RBP19.6■□□□□ 0.73
GARNL3-204ENST00000429629 LOC102724428A0A0B4J2F2 783 aa19.6■□□□□ 0.73
GARNL3-204ENST00000429629 BTBD11A6QL63 1104 aa19.6■□□□□ 0.73
GARNL3-204ENST00000429629 SIK1P57059 783 aa19.6■□□□□ 0.73
GARNL3-204ENST00000429629 DOT1LQ8TEK3 1739 aa19.59■□□□□ 0.73
GARNL3-204ENST00000429629 TOGARAM1Q9Y4F4 1720 aa19.59■□□□□ 0.73
GARNL3-204ENST00000429629 CCNL1Q9UK58 526 aaPredicted RBP19.59■□□□□ 0.73
GARNL3-204ENST00000429629 NBPF14Q5TI25 921 aa19.58■□□□□ 0.72
GARNL3-204ENST00000429629 TTC5Q8N0Z6 440 aa19.58■□□□□ 0.72
GARNL3-204ENST00000429629 LRRC4BQ9NT99 713 aa19.58■□□□□ 0.72
GARNL3-204ENST00000429629 RGPD3A6NKT7 1758 aaPredicted RBP19.57■□□□□ 0.72
GARNL3-204ENST00000429629 RGPD4Q7Z3J3 1758 aa19.57■□□□□ 0.72
GARNL3-204ENST00000429629 CHL1O00533 1208 aa19.57■□□□□ 0.72
GARNL3-204ENST00000429629 WWC1Q8IX03 1113 aa19.57■□□□□ 0.72
GARNL3-204ENST00000429629 TEX13AQ9BXU3 409 aaPredicted RBP19.57■□□□□ 0.72
GARNL3-204ENST00000429629 SCN11AQ9UI33 1791 aa19.57■□□□□ 0.72
GARNL3-204ENST00000429629 SLC39A6Q13433 755 aa19.56■□□□□ 0.72
GARNL3-204ENST00000429629 WDR63Q8IWG1 891 aa19.56■□□□□ 0.72
GARNL3-204ENST00000429629 CFAP44Q96MT7 982 aa19.56■□□□□ 0.72
GARNL3-204ENST00000429629 IL16Q14005 1332 aa19.55■□□□□ 0.72
GARNL3-204ENST00000429629 ZNF853P0CG23 659 aa19.55■□□□□ 0.72
GARNL3-204ENST00000429629 FMNL2Q96PY5 1086 aa19.55■□□□□ 0.72
GARNL3-204ENST00000429629 SLC4A9Q96Q91 983 aa19.55■□□□□ 0.72
GARNL3-204ENST00000429629 THUMPD2Q9BTF0 503 aaKnown RBP19.55■□□□□ 0.72
GARNL3-204ENST00000429629 BTAF1O14981 1849 aa19.55■□□□□ 0.72
GARNL3-204ENST00000429629 ATP6V1AP38606 617 aa19.54■□□□□ 0.72
GARNL3-204ENST00000429629 RC3H1Q5TC82 1133 aaKnown RBP19.54■□□□□ 0.72
GARNL3-204ENST00000429629 RBM42Q9BTD8 480 aaKnown RBP19.54■□□□□ 0.72
GARNL3-204ENST00000429629 IFT57Q9NWB7 429 aa19.54■□□□□ 0.72
GARNL3-204ENST00000429629 PTCD1O75127 700 aaKnown RBP19.53■□□□□ 0.72
GARNL3-204ENST00000429629 GNAI1P63096 354 aa19.53■□□□□ 0.72
GARNL3-204ENST00000429629 ZNF496Q96IT1 587 aaPredicted RBP19.53■□□□□ 0.72
GARNL3-204ENST00000429629 AKT1S1Q96B36 256 aa19.52■□□□□ 0.72
GARNL3-204ENST00000429629 ITGB4P16144 1822 aa19.51■□□□□ 0.71
GARNL3-204ENST00000429629 EIF4A1P60842 406 aaKnown RBP19.51■□□□□ 0.71
GARNL3-204ENST00000429629 ITPK1Q13572 414 aa19.51■□□□□ 0.71
GARNL3-204ENST00000429629 SLC15A2Q16348 729 aa19.51■□□□□ 0.71
GARNL3-204ENST00000429629 TSPYL4Q9UJ04 414 aa19.51■□□□□ 0.71
GARNL3-204ENST00000429629 HEG1Q9ULI3 1381 aa19.51■□□□□ 0.71
GARNL3-204ENST00000429629 KCNQ3O43525 872 aa19.5■□□□□ 0.71
GARNL3-204ENST00000429629 SNRPA1P09661 255 aaKnown RBP19.5■□□□□ 0.71
GARNL3-204ENST00000429629 STK32BQ9NY57 414 aa19.5■□□□□ 0.71
GARNL3-204ENST00000429629 ZNF521Q96K83 1311 aa19.5■□□□□ 0.71
GARNL3-204ENST00000429629 STARD3NLO95772 234 aa19.49■□□□□ 0.71
GARNL3-204ENST00000429629 MIS18AQ9NYP9 233 aa19.49■□□□□ 0.71
GARNL3-204ENST00000429629 ZNF831Q5JPB2 1677 aa19.49■□□□□ 0.71
GARNL3-204ENST00000429629 KCPQ6ZWJ8 1503 aa19.48■□□□□ 0.71
GARNL3-204ENST00000429629 FLAD1Q8NFF5 587 aa19.48■□□□□ 0.71
GARNL3-204ENST00000429629 KAT6BQ8WYB5 2073 aa19.48■□□□□ 0.71
GARNL3-204ENST00000429629 CNTNAP4Q9C0A0 1308 aa19.48■□□□□ 0.71
GARNL3-204ENST00000429629 LY75O60449 1722 aa19.48■□□□□ 0.71
GARNL3-204ENST00000429629 GIGYF1O75420 1035 aaPredicted RBP19.47■□□□□ 0.71
GARNL3-204ENST00000429629 CYP19A1P11511 503 aaPredicted RBP19.47■□□□□ 0.71
GARNL3-204ENST00000429629 KCNQ4P56696 695 aa19.47■□□□□ 0.71
GARNL3-204ENST00000429629 LINC00116Q8NCU8 138 aa19.47■□□□□ 0.71
GARNL3-204ENST00000429629 HOXB7P09629 217 aa19.46■□□□□ 0.71
GARNL3-204ENST00000429629 DNAJC10Q8IXB1 793 aa19.46■□□□□ 0.71
GARNL3-204ENST00000429629 CHMP4AQ9BY43 222 aa19.46■□□□□ 0.71
GARNL3-204ENST00000429629 ANO8Q9HCE9 1232 aaPredicted RBP19.46■□□□□ 0.71
GARNL3-204ENST00000429629 SOS1Q07889 1333 aaPredicted RBP19.46■□□□□ 0.71
GARNL3-204ENST00000429629 RREB1Q92766 1687 aa19.46■□□□□ 0.71
GARNL3-204ENST00000429629 MBIPQ9NS73 344 aa19.45■□□□□ 0.7
GARNL3-204ENST00000429629 SIPA1L3O60292 1781 aaPredicted RBP19.44■□□□□ 0.7
GARNL3-204ENST00000429629 PAPPAQ13219 1627 aa19.44■□□□□ 0.7
GARNL3-204ENST00000429629 RPS6KA4O75676 772 aa19.44■□□□□ 0.7
GARNL3-204ENST00000429629 ADRA2BP18089 450 aa19.44■□□□□ 0.7
GARNL3-204ENST00000429629 ZNF827Q17R98 1081 aa19.44■□□□□ 0.7
GARNL3-204ENST00000429629 AK7Q96M32 723 aa19.44■□□□□ 0.7
GARNL3-204ENST00000429629 DLG5Q8TDM6 1919 aa19.43■□□□□ 0.7
GARNL3-204ENST00000429629 SSFA2P28290 1259 aa19.43■□□□□ 0.7
GARNL3-204ENST00000429629 CRKLP46109 303 aaKnown RBP19.43■□□□□ 0.7
GARNL3-204ENST00000429629 INTS5Q6P9B9 1019 aaKnown RBP19.43■□□□□ 0.7
GARNL3-204ENST00000429629 TFCP2L1Q9NZI6 479 aa19.43■□□□□ 0.7
GARNL3-204ENST00000429629 LAS1LQ9Y4W2 734 aaKnown RBP19.43■□□□□ 0.7
GARNL3-204ENST00000429629 GOLGA2Q08379 1002 aa19.42■□□□□ 0.7
GARNL3-204ENST00000429629 SLC16A10Q8TF71 515 aa19.42■□□□□ 0.7
GARNL3-204ENST00000429629 MYH16Q9H6N6 1097 aa19.42■□□□□ 0.7
GARNL3-204ENST00000429629 CCDC87Q9NVE4 849 aa19.42■□□□□ 0.7
GARNL3-204ENST00000429629 SALL2Q9Y467 1007 aaPredicted RBP19.42■□□□□ 0.7
GARNL3-204ENST00000429629 USP16Q9Y5T5 823 aa19.42■□□□□ 0.7
GARNL3-204ENST00000429629 CICQ96RK0 1608 aaPredicted RBP19.42■□□□□ 0.7
GARNL3-204ENST00000429629 R3HDM1Q15032 1099 aaKnown RBP19.41■□□□□ 0.7
GARNL3-204ENST00000429629 RTCBQ9Y3I0 505 aaKnown RBP19.41■□□□□ 0.7
GARNL3-204ENST00000429629 ERBB4Q15303 1308 aa19.41■□□□□ 0.7
GARNL3-204ENST00000429629 E9PSI1 815 aa19.4■□□□□ 0.7
GARNL3-204ENST00000429629 IL6STP40189 918 aaPredicted RBP19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 286.6 ms