RNA–Protein interactions for RNA: ENST00000428863.6

MDM2-215, Transcript of MDM2 proto-oncogene, humanhuman

TSL 5 BASIC

Gene MDM2, Length 1,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-215ENST00000428863 KLHL34Q8N239 644 aa20.6■□□□□ 0.89
MDM2-215ENST00000428863 NLGN2Q8NFZ4 835 aa20.6■□□□□ 0.89
MDM2-215ENST00000428863 DCAF5Q96JK2 942 aa20.6■□□□□ 0.89
MDM2-215ENST00000428863 ATP6V1AP38606 617 aa20.59■□□□□ 0.89
MDM2-215ENST00000428863 FLAD1Q8NFF5 587 aa20.59■□□□□ 0.89
MDM2-215ENST00000428863 AK7Q96M32 723 aa20.59■□□□□ 0.89
MDM2-215ENST00000428863 HSP90AB1P08238 724 aaKnown RBP20.58■□□□□ 0.89
MDM2-215ENST00000428863 CHD4Q14839 1912 aa20.58■□□□□ 0.88
MDM2-215ENST00000428863 PHF14O94880 888 aa20.57■□□□□ 0.88
MDM2-215ENST00000428863 HMGB2P26583 209 aaKnown RBP20.57■□□□□ 0.88
MDM2-215ENST00000428863 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.56■□□□□ 0.88
MDM2-215ENST00000428863 SCN11AQ9UI33 1791 aa20.56■□□□□ 0.88
MDM2-215ENST00000428863 CABP4P57796 275 aa20.55■□□□□ 0.88
MDM2-215ENST00000428863 CNGB1Q14028 1251 aaPredicted RBP20.55■□□□□ 0.88
MDM2-215ENST00000428863 ZNF831Q5JPB2 1677 aa20.54■□□□□ 0.88
MDM2-215ENST00000428863 MYH14Q7Z406 1995 aaKnown RBP20.54■□□□□ 0.88
MDM2-215ENST00000428863 HMOX1P09601 288 aa20.54■□□□□ 0.88
MDM2-215ENST00000428863 NFATC2IPQ8NCF5 419 aa20.54■□□□□ 0.88
MDM2-215ENST00000428863 VIRMAQ69YN4 1812 aaKnown RBP20.54■□□□□ 0.88
MDM2-215ENST00000428863 NPC1L1Q9UHC9 1359 aa20.54■□□□□ 0.88
MDM2-215ENST00000428863 SSFA2P28290 1259 aa20.53■□□□□ 0.88
MDM2-215ENST00000428863 C1orf141Q5JVX7 400 aa20.53■□□□□ 0.88
MDM2-215ENST00000428863 RBM42Q9BTD8 480 aaKnown RBP20.53■□□□□ 0.88
MDM2-215ENST00000428863 COL5A3P25940 1745 aaPredicted RBP20.53■□□□□ 0.88
MDM2-215ENST00000428863 GNPATO15228 680 aa20.52■□□□□ 0.88
MDM2-215ENST00000428863 GPR162Q16538 588 aa20.52■□□□□ 0.88
MDM2-215ENST00000428863 DIAPH1O60610 1272 aaKnown RBP20.51■□□□□ 0.87
MDM2-215ENST00000428863 LGR6Q9HBX8 967 aa20.51■□□□□ 0.87
MDM2-215ENST00000428863 COL3A1P02461 1466 aaPredicted RBP20.5■□□□□ 0.87
MDM2-215ENST00000428863 AKAP4Q5JQC9 854 aa20.5■□□□□ 0.87
MDM2-215ENST00000428863 PTCD1O75127 700 aaKnown RBP20.48■□□□□ 0.87
MDM2-215ENST00000428863 YBX3P16989 372 aaKnown RBP eCLIP20.48■□□□□ 0.878e-7■■□□□ 12.2
MDM2-215ENST00000428863 MTHFSDQ2M296 383 aaKnown RBP20.48■□□□□ 0.87
MDM2-215ENST00000428863 PELP1Q8IZL8 1130 aaKnown RBP20.48■□□□□ 0.87
MDM2-215ENST00000428863 GOLGB1Q14789 3259 aaKnown RBP20.47■□□□□ 0.87
MDM2-215ENST00000428863 RC3H1Q5TC82 1133 aaKnown RBP20.47■□□□□ 0.87
MDM2-215ENST00000428863 CD2APQ9Y5K6 639 aa20.47■□□□□ 0.87
MDM2-215ENST00000428863 RNMTO43148 476 aaKnown RBP20.46■□□□□ 0.87
MDM2-215ENST00000428863 ZNF784Q8NCA9 323 aaPredicted RBP20.46■□□□□ 0.87
MDM2-215ENST00000428863 TJP1Q07157 1748 aa20.46■□□□□ 0.87
MDM2-215ENST00000428863 CNTNAP4Q9C0A0 1308 aa20.46■□□□□ 0.87
MDM2-215ENST00000428863 TRAPPC3LQ5T215 181 aa20.45■□□□□ 0.86
MDM2-215ENST00000428863 ARHGEF1Q92888 912 aaKnown RBP20.45■□□□□ 0.86
MDM2-215ENST00000428863 SLC52A2Q9HAB3 445 aa20.45■□□□□ 0.86
MDM2-215ENST00000428863 RTCBQ9Y3I0 505 aaKnown RBP20.45■□□□□ 0.86
MDM2-215ENST00000428863 ADAMTS7Q9UKP4 1686 aa20.45■□□□□ 0.86
MDM2-215ENST00000428863 RPS6KA4O75676 772 aa20.44■□□□□ 0.86
MDM2-215ENST00000428863 MRC1P22897 1456 aa20.43■□□□□ 0.86
MDM2-215ENST00000428863 CICQ96RK0 1608 aaPredicted RBP20.42■□□□□ 0.86
MDM2-215ENST00000428863 C4AP0C0L4 1744 aa20.42■□□□□ 0.86
MDM2-215ENST00000428863 SLC39A6Q13433 755 aa20.42■□□□□ 0.86
MDM2-215ENST00000428863 U2SURPO15042 1029 aaKnown RBP20.41■□□□□ 0.86
MDM2-215ENST00000428863 MMP10P09238 476 aa20.41■□□□□ 0.86
MDM2-215ENST00000428863 CRKLP46109 303 aaKnown RBP20.41■□□□□ 0.86
MDM2-215ENST00000428863 ADRA2BP18089 450 aa20.4■□□□□ 0.86
MDM2-215ENST00000428863 GYS1P13807 737 aa20.39■□□□□ 0.85
MDM2-215ENST00000428863 INTS5Q6P9B9 1019 aaKnown RBP20.39■□□□□ 0.85
MDM2-215ENST00000428863 DNAJC10Q8IXB1 793 aa20.39■□□□□ 0.85
MDM2-215ENST00000428863 KIF13BQ9NQT8 1826 aa20.39■□□□□ 0.85
MDM2-215ENST00000428863 KCPQ6ZWJ8 1503 aa20.38■□□□□ 0.85
MDM2-215ENST00000428863 GRIN3BO60391 1043 aa20.38■□□□□ 0.85
MDM2-215ENST00000428863 KIAA1551Q9HCM1 1747 aa20.37■□□□□ 0.85
MDM2-215ENST00000428863 PPP2R1AP30153 589 aa20.37■□□□□ 0.85
MDM2-215ENST00000428863 RFC4P35249 363 aa20.37■□□□□ 0.85
MDM2-215ENST00000428863 NLGN1Q8N2Q7 840 aa20.37■□□□□ 0.85
MDM2-215ENST00000428863 IL17REQ8NFR9 667 aa20.37■□□□□ 0.85
MDM2-215ENST00000428863 PHACTR3Q96KR7 559 aa20.37■□□□□ 0.85
MDM2-215ENST00000428863 WWC3Q9ULE0 1092 aa20.37■□□□□ 0.85
MDM2-215ENST00000428863 SRP68Q9UHB9 627 aaKnown RBP20.36■□□□□ 0.85
MDM2-215ENST00000428863 N4BP2Q86UW6 1770 aaPredicted RBP20.36■□□□□ 0.85
MDM2-215ENST00000428863 CYP19A1P11511 503 aaPredicted RBP20.35■□□□□ 0.85
MDM2-215ENST00000428863 RSPH6AQ9H0K4 717 aa20.35■□□□□ 0.85
MDM2-215ENST00000428863 SIPA1L3O60292 1781 aaPredicted RBP20.35■□□□□ 0.85
MDM2-215ENST00000428863 UBR2Q8IWV8 1755 aa20.35■□□□□ 0.85
MDM2-215ENST00000428863 FKBP8Q14318 412 aa20.33■□□□□ 0.85
MDM2-215ENST00000428863 CCDC87Q9NVE4 849 aa20.33■□□□□ 0.85
MDM2-215ENST00000428863 USP42Q9H9J4 1324 aaKnown RBP20.32■□□□□ 0.84
MDM2-215ENST00000428863 GNAT3A8MTJ3 354 aa20.32■□□□□ 0.84
MDM2-215ENST00000428863 PRKAR2BP31323 418 aa20.32■□□□□ 0.84
MDM2-215ENST00000428863 GAS2L2Q8NHY3 880 aa20.32■□□□□ 0.84
MDM2-215ENST00000428863 PXDNLA1KZ92 1463 aa20.31■□□□□ 0.84
MDM2-215ENST00000428863 SOS1Q07889 1333 aaPredicted RBP20.31■□□□□ 0.84
MDM2-215ENST00000428863 CFAP53Q96M91 514 aa20.31■□□□□ 0.84
MDM2-215ENST00000428863 C10orf71Q711Q0 1435 aa20.3■□□□□ 0.84
MDM2-215ENST00000428863 DDR1Q08345 913 aa20.3■□□□□ 0.84
MDM2-215ENST00000428863 ZBTB1Q9Y2K1 713 aa20.3■□□□□ 0.84
MDM2-215ENST00000428863 A0A0G2JLW4 131 aa20.29■□□□□ 0.84
MDM2-215ENST00000428863 VSIG10Q8N0Z9 540 aa20.29■□□□□ 0.84
MDM2-215ENST00000428863 PARP3Q9Y6F1 533 aa20.29■□□□□ 0.84
MDM2-215ENST00000428863 TM4SF1P30408 202 aa20.28■□□□□ 0.84
MDM2-215ENST00000428863 TGFB2P61812 414 aa20.28■□□□□ 0.84
MDM2-215ENST00000428863 ZNF496Q96IT1 587 aaPredicted RBP20.28■□□□□ 0.84
MDM2-215ENST00000428863 CEMIPQ8WUJ3 1361 aa20.28■□□□□ 0.84
MDM2-215ENST00000428863 BRCA1P38398 1863 aaKnown RBP20.28■□□□□ 0.84
MDM2-215ENST00000428863 KCNQ3O43525 872 aa20.27■□□□□ 0.84
MDM2-215ENST00000428863 U2AF1L5P0DN76 240 aaPredicted RBP20.27■□□□□ 0.84
MDM2-215ENST00000428863 U2AF1Q01081 240 aaKnown RBP eCLIP20.27■□□□□ 0.846e-7■□□□□ 8.9
MDM2-215ENST00000428863 TEFQ10587 303 aa20.27■□□□□ 0.84
MDM2-215ENST00000428863 USPL1Q5W0Q7 1092 aa20.27■□□□□ 0.84
MDM2-215ENST00000428863 ZNF790Q6PG37 636 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 429.4 ms