RNA–Protein interactions for RNA: ENST00000428082.6

TVP23C-203, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-203ENST00000428082 COG6Q9Y2V7 657 aa19.94■□□□□ 0.78
TVP23C-203ENST00000428082 ATRNO75882 1429 aa19.93■□□□□ 0.78
TVP23C-203ENST00000428082 MPRIPQ6WCQ1 1025 aa19.93■□□□□ 0.78
TVP23C-203ENST00000428082 IFNL2Q8IZJ0 200 aa19.93■□□□□ 0.78
TVP23C-203ENST00000428082 LGR6Q9HBX8 967 aa19.93■□□□□ 0.78
TVP23C-203ENST00000428082 LRRC37A3O60309 1634 aa19.92■□□□□ 0.78
TVP23C-203ENST00000428082 PCDH11XQ9BZA7 1347 aa19.92■□□□□ 0.78
TVP23C-203ENST00000428082 PCDH11YQ9BZA8 1340 aa19.92■□□□□ 0.78
TVP23C-203ENST00000428082 SKAP1Q86WV1 359 aa19.92■□□□□ 0.78
TVP23C-203ENST00000428082 PANK1Q8TE04 598 aa19.92■□□□□ 0.78
TVP23C-203ENST00000428082 GLI3P10071 1580 aa19.92■□□□□ 0.78
TVP23C-203ENST00000428082 RGS3P49796 1198 aa19.92■□□□□ 0.78
TVP23C-203ENST00000428082 FAM98CQ17RN3 349 aaKnown RBP19.92■□□□□ 0.78
TVP23C-203ENST00000428082 CDCA7Q9BWT1 371 aaPredicted RBP19.92■□□□□ 0.78
TVP23C-203ENST00000428082 DEKP35659 375 aaKnown RBP19.91■□□□□ 0.78
TVP23C-203ENST00000428082 DDX54Q8TDD1 881 aaKnown RBP19.91■□□□□ 0.78
TVP23C-203ENST00000428082 TRPC5Q9UL62 973 aaPredicted RBP19.91■□□□□ 0.78
TVP23C-203ENST00000428082 CEMIPQ8WUJ3 1361 aa19.91■□□□□ 0.78
TVP23C-203ENST00000428082 ADAMTS7Q9UKP4 1686 aa19.9■□□□□ 0.78
TVP23C-203ENST00000428082 CALD1Q05682 793 aaKnown RBP19.9■□□□□ 0.78
TVP23C-203ENST00000428082 GJD4Q96KN9 370 aaPredicted RBP19.9■□□□□ 0.78
TVP23C-203ENST00000428082 LAS1LQ9Y4W2 734 aaKnown RBP19.9■□□□□ 0.78
TVP23C-203ENST00000428082 SCN11AQ9UI33 1791 aa19.9■□□□□ 0.78
TVP23C-203ENST00000428082 RNMTO43148 476 aaKnown RBP19.9■□□□□ 0.78
TVP23C-203ENST00000428082 IGHDP01880 384 aa19.9■□□□□ 0.78
TVP23C-203ENST00000428082 QTRT2Q9H974 415 aaKnown RBP19.9■□□□□ 0.78
TVP23C-203ENST00000428082 KDM6AO15550 1401 aaPredicted RBP19.89■□□□□ 0.78
TVP23C-203ENST00000428082 EXOC5O00471 708 aa19.89■□□□□ 0.77
TVP23C-203ENST00000428082 ZKSCAN2Q63HK3 967 aa19.89■□□□□ 0.77
TVP23C-203ENST00000428082 TNS2Q63HR2 1409 aa19.89■□□□□ 0.77
TVP23C-203ENST00000428082 ZNF853P0CG23 659 aa19.88■□□□□ 0.77
TVP23C-203ENST00000428082 TSR2Q969E8 191 aaKnown RBP19.88■□□□□ 0.77
TVP23C-203ENST00000428082 RWDD1Q9H446 243 aaPredicted RBP19.88■□□□□ 0.77
TVP23C-203ENST00000428082 DDB1Q16531 1140 aa19.88■□□□□ 0.77
TVP23C-203ENST00000428082 CFAP44Q96MT7 982 aa19.88■□□□□ 0.77
TVP23C-203ENST00000428082 IFT57Q9NWB7 429 aa19.88■□□□□ 0.77
TVP23C-203ENST00000428082 GNAI1P63096 354 aa19.87■□□□□ 0.77
TVP23C-203ENST00000428082 DCAF5Q96JK2 942 aa19.86■□□□□ 0.77
TVP23C-203ENST00000428082 THSD7AQ9UPZ6 1657 aa19.86■□□□□ 0.77
TVP23C-203ENST00000428082 HSP90AB1P08238 724 aaKnown RBP19.85■□□□□ 0.77
TVP23C-203ENST00000428082 NKX1-1Q15270 411 aaPredicted RBP19.85■□□□□ 0.77
TVP23C-203ENST00000428082 ZNF772Q68DY9 489 aaPredicted RBP19.85■□□□□ 0.77
TVP23C-203ENST00000428082 MBIPQ9NS73 344 aa19.85■□□□□ 0.77
TVP23C-203ENST00000428082 MIS18AQ9NYP9 233 aa19.85■□□□□ 0.77
TVP23C-203ENST00000428082 SIPA1L3O60292 1781 aaPredicted RBP19.84■□□□□ 0.77
TVP23C-203ENST00000428082 CHL1O00533 1208 aa19.84■□□□□ 0.77
TVP23C-203ENST00000428082 MVPQ14764 893 aaKnown RBP19.84■□□□□ 0.77
TVP23C-203ENST00000428082 A0A0G2JS52 829 aa19.84■□□□□ 0.77
TVP23C-203ENST00000428082 TEFQ10587 303 aa19.84■□□□□ 0.77
TVP23C-203ENST00000428082 FTSJ3Q8IY81 847 aaKnown RBP19.84■□□□□ 0.77
TVP23C-203ENST00000428082 DZIP1LQ8IYY4 767 aaKnown RBP19.84■□□□□ 0.77
TVP23C-203ENST00000428082 TAF7Q15545 349 aaPredicted RBP19.83■□□□□ 0.77
TVP23C-203ENST00000428082 TOGARAM1Q9Y4F4 1720 aa19.83■□□□□ 0.76
TVP23C-203ENST00000428082 MARCH10Q8NA82 808 aaPredicted RBP19.82■□□□□ 0.76
TVP23C-203ENST00000428082 ONECUT3O60422 494 aaPredicted RBP19.81■□□□□ 0.76
TVP23C-203ENST00000428082 ILDR1Q86SU0 546 aaPredicted RBP19.81■□□□□ 0.76
TVP23C-203ENST00000428082 ZNF428Q96B54 188 aa19.81■□□□□ 0.76
TVP23C-203ENST00000428082 SLC52A2Q9HAB3 445 aa19.81■□□□□ 0.76
TVP23C-203ENST00000428082 TSPYL4Q9UJ04 414 aa19.81■□□□□ 0.76
TVP23C-203ENST00000428082 MRC1P22897 1456 aa19.81■□□□□ 0.76
TVP23C-203ENST00000428082 RLBP1P12271 317 aa19.8■□□□□ 0.76
TVP23C-203ENST00000428082 EXOSC9Q06265 439 aaKnown RBP19.8■□□□□ 0.76
TVP23C-203ENST00000428082 SMC4Q9NTJ3 1288 aa19.8■□□□□ 0.76
TVP23C-203ENST00000428082 RGS17Q9UGC6 210 aaPredicted RBP19.8■□□□□ 0.76
TVP23C-203ENST00000428082 IPO8O15397 1037 aaKnown RBP19.8■□□□□ 0.76
TVP23C-203ENST00000428082 NFATC2IPQ8NCF5 419 aa19.8■□□□□ 0.76
TVP23C-203ENST00000428082 KDM3BQ7LBC6 1761 aa19.8■□□□□ 0.76
TVP23C-203ENST00000428082 BCL2L13Q9BXK5 485 aa19.79■□□□□ 0.76
TVP23C-203ENST00000428082 DDX19BQ9UMR2 479 aa19.79■□□□□ 0.76
TVP23C-203ENST00000428082 KIF16BQ96L93 1317 aa19.79■□□□□ 0.76
TVP23C-203ENST00000428082 KAT6BQ8WYB5 2073 aa19.79■□□□□ 0.76
TVP23C-203ENST00000428082 BTBD11A6QL63 1104 aa19.78■□□□□ 0.76
TVP23C-203ENST00000428082 PCDHB15Q9Y5E8 787 aa19.78■□□□□ 0.76
TVP23C-203ENST00000428082 ERVV-2B6SEH9 535 aa19.78■□□□□ 0.76
TVP23C-203ENST00000428082 CABP4P57796 275 aa19.78■□□□□ 0.76
TVP23C-203ENST00000428082 ALDH1L2Q3SY69 923 aa19.78■□□□□ 0.76
TVP23C-203ENST00000428082 SEPT12Q8IYM1 358 aa19.78■□□□□ 0.76
TVP23C-203ENST00000428082 BABAM1Q9NWV8 329 aa19.78■□□□□ 0.76
TVP23C-203ENST00000428082 ITGB4P16144 1822 aa19.77■□□□□ 0.76
TVP23C-203ENST00000428082 BCL11AQ9H165 835 aa19.77■□□□□ 0.76
TVP23C-203ENST00000428082 UPF2Q9HAU5 1272 aaKnown RBP19.77■□□□□ 0.76
TVP23C-203ENST00000428082 DOT1LQ8TEK3 1739 aa19.77■□□□□ 0.76
TVP23C-203ENST00000428082 RBM6P78332 1123 aaKnown RBP19.76■□□□□ 0.75
TVP23C-203ENST00000428082 KRT24Q2M2I5 525 aa19.76■□□□□ 0.75
TVP23C-203ENST00000428082 ATF7IPQ6VMQ6 1270 aa19.76■□□□□ 0.75
TVP23C-203ENST00000428082 KCNQ3O43525 872 aa19.76■□□□□ 0.75
TVP23C-203ENST00000428082 TSPYL6Q8N831 410 aa19.75■□□□□ 0.75
TVP23C-203ENST00000428082 C8orf58Q8NAV2 365 aa19.75■□□□□ 0.75
TVP23C-203ENST00000428082 BRWD3Q6RI45 1802 aa19.75■□□□□ 0.75
TVP23C-203ENST00000428082 ELL2O00472 640 aaPredicted RBP19.74■□□□□ 0.75
TVP23C-203ENST00000428082 CHMP4BQ9H444 224 aaKnown RBP19.74■□□□□ 0.75
TVP23C-203ENST00000428082 PDZRN3Q9UPQ7 1066 aa19.74■□□□□ 0.75
TVP23C-203ENST00000428082 SLC39A6Q13433 755 aa19.74■□□□□ 0.75
TVP23C-203ENST00000428082 HDAC1Q13547 482 aaPredicted RBP19.74■□□□□ 0.75
TVP23C-203ENST00000428082 BECN1Q14457 450 aa19.74■□□□□ 0.75
TVP23C-203ENST00000428082 SSH1Q8WYL5 1049 aa19.74■□□□□ 0.75
TVP23C-203ENST00000428082 POTEAQ6S8J7 498 aa19.73■□□□□ 0.75
TVP23C-203ENST00000428082 TRIM27P14373 513 aa19.72■□□□□ 0.75
TVP23C-203ENST00000428082 BRPF1P55201 1214 aaPredicted RBP19.72■□□□□ 0.75
TVP23C-203ENST00000428082 FAM182BQ5T319 152 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms