RNA–Protein interactions for RNA: ENST00000426878.2

LMCD1-204, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-204ENST00000426878 LGR6Q9HBX8 967 aa23.01■■□□□ 1.27
LMCD1-204ENST00000426878 TAF1LQ8IZX4 1826 aa23.01■■□□□ 1.27
LMCD1-204ENST00000426878 C5P01031 1676 aa23.01■■□□□ 1.27
LMCD1-204ENST00000426878 SLC52A2Q9HAB3 445 aa23■■□□□ 1.27
LMCD1-204ENST00000426878 SPON1Q9HCB6 807 aa23■■□□□ 1.27
LMCD1-204ENST00000426878 MRC1P22897 1456 aa23■■□□□ 1.27
LMCD1-204ENST00000426878 GNAT3A8MTJ3 354 aa22.99■■□□□ 1.27
LMCD1-204ENST00000426878 MAP3K5Q99683 1374 aa22.98■■□□□ 1.27
LMCD1-204ENST00000426878 ZNF831Q5JPB2 1677 aa22.98■■□□□ 1.27
LMCD1-204ENST00000426878 PRKRIP1Q9H875 184 aaPredicted RBP22.98■■□□□ 1.27
LMCD1-204ENST00000426878 TFCP2L1Q9NZI6 479 aa22.98■■□□□ 1.27
LMCD1-204ENST00000426878 VIRMAQ69YN4 1812 aaKnown RBP22.97■■□□□ 1.27
LMCD1-204ENST00000426878 PNPLA7Q6ZV29 1317 aa22.96■■□□□ 1.27
LMCD1-204ENST00000426878 SLC16A10Q8TF71 515 aa22.96■■□□□ 1.27
LMCD1-204ENST00000426878 TUBGCP6Q96RT7 1819 aa22.95■■□□□ 1.26
LMCD1-204ENST00000426878 ATP6V1AP38606 617 aa22.95■■□□□ 1.26
LMCD1-204ENST00000426878 MTFR1LQ9H019 292 aa22.95■■□□□ 1.26
LMCD1-204ENST00000426878 C4BP0C0L5 1744 aa22.94■■□□□ 1.26
LMCD1-204ENST00000426878 ITPK1Q13572 414 aa22.94■■□□□ 1.26
LMCD1-204ENST00000426878 IL17REQ8NFR9 667 aa22.94■■□□□ 1.26
LMCD1-204ENST00000426878 SLC4A9Q96Q91 983 aa22.94■■□□□ 1.26
LMCD1-204ENST00000426878 ZBTB7AO95365 584 aa22.93■■□□□ 1.26
LMCD1-204ENST00000426878 CEMIPQ8WUJ3 1361 aa22.92■■□□□ 1.26
LMCD1-204ENST00000426878 LINC00116Q8NCU8 138 aa22.92■■□□□ 1.26
LMCD1-204ENST00000426878 FLAD1Q8NFF5 587 aa22.92■■□□□ 1.26
LMCD1-204ENST00000426878 PLEKHF1Q96S99 279 aa22.92■■□□□ 1.26
LMCD1-204ENST00000426878 RBM42Q9BTD8 480 aaKnown RBP22.92■■□□□ 1.26
LMCD1-204ENST00000426878 PNNQ9H307 717 aaKnown RBP22.92■■□□□ 1.26
LMCD1-204ENST00000426878 PTGER2P43116 358 aa22.91■■□□□ 1.26
LMCD1-204ENST00000426878 HTATSF1O43719 755 aaKnown RBP22.91■■□□□ 1.26
LMCD1-204ENST00000426878 AK7Q96M32 723 aa22.91■■□□□ 1.26
LMCD1-204ENST00000426878 NEFMP07197 916 aa22.9■■□□□ 1.26
LMCD1-204ENST00000426878 SGIP1Q9BQI5 828 aa22.9■■□□□ 1.26
LMCD1-204ENST00000426878 ATF5Q9Y2D1 282 aaPredicted RBP22.9■■□□□ 1.26
LMCD1-204ENST00000426878 PTCD1O75127 700 aaKnown RBP22.89■■□□□ 1.25
LMCD1-204ENST00000426878 TEFQ10587 303 aa22.89■■□□□ 1.25
LMCD1-204ENST00000426878 RC3H1Q5TC82 1133 aaKnown RBP22.89■■□□□ 1.25
LMCD1-204ENST00000426878 COL23A1Q86Y22 540 aaPredicted RBP22.89■■□□□ 1.25
LMCD1-204ENST00000426878 CICQ96RK0 1608 aaPredicted RBP22.89■■□□□ 1.25
LMCD1-204ENST00000426878 UBR3Q6ZT12 1888 aa22.88■■□□□ 1.25
LMCD1-204ENST00000426878 SIPA1L3O60292 1781 aaPredicted RBP22.87■■□□□ 1.25
LMCD1-204ENST00000426878 SSFA2P28290 1259 aa22.87■■□□□ 1.25
LMCD1-204ENST00000426878 COL5A3P25940 1745 aaPredicted RBP22.87■■□□□ 1.25
LMCD1-204ENST00000426878 COL24A1Q17RW2 1714 aa22.86■■□□□ 1.25
LMCD1-204ENST00000426878 SLC39A6Q13433 755 aa22.86■■□□□ 1.25
LMCD1-204ENST00000426878 RTF1Q92541 710 aaKnown RBP22.86■■□□□ 1.25
LMCD1-204ENST00000426878 PPP1R1BQ9UD71 204 aaPredicted RBP22.85■■□□□ 1.25
LMCD1-204ENST00000426878 CNTNAP4Q9C0A0 1308 aa22.85■■□□□ 1.25
LMCD1-204ENST00000426878 KCPQ6ZWJ8 1503 aa22.85■■□□□ 1.25
LMCD1-204ENST00000426878 AMIGO3Q86WK7 504 aa22.84■■□□□ 1.25
LMCD1-204ENST00000426878 UBR2Q8IWV8 1755 aa22.84■■□□□ 1.25
LMCD1-204ENST00000426878 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.83■■□□□ 1.25
LMCD1-204ENST00000426878 GNPATO15228 680 aa22.83■■□□□ 1.25
LMCD1-204ENST00000426878 NFE2L2Q16236 605 aa22.83■■□□□ 1.25
LMCD1-204ENST00000426878 VSIG10Q8N0Z9 540 aa22.83■■□□□ 1.25
LMCD1-204ENST00000426878 ZNF790Q6PG37 636 aa22.82■■□□□ 1.24
LMCD1-204ENST00000426878 MAPK8IP3Q9UPT6 1336 aa22.82■■□□□ 1.24
LMCD1-204ENST00000426878 TJP1Q07157 1748 aa22.82■■□□□ 1.24
LMCD1-204ENST00000426878 MSH5O43196 834 aa22.82■■□□□ 1.24
LMCD1-204ENST00000426878 MCM10Q7L590 875 aa22.82■■□□□ 1.24
LMCD1-204ENST00000426878 TTC5Q8N0Z6 440 aa22.82■■□□□ 1.24
LMCD1-204ENST00000426878 MYH14Q7Z406 1995 aaKnown RBP22.81■■□□□ 1.24
LMCD1-204ENST00000426878 RTCBQ9Y3I0 505 aaKnown RBP22.81■■□□□ 1.24
LMCD1-204ENST00000426878 DLG5Q8TDM6 1919 aa22.8■■□□□ 1.24
LMCD1-204ENST00000426878 RPS6KA4O75676 772 aa22.8■■□□□ 1.24
LMCD1-204ENST00000426878 ADRA2BP18089 450 aa22.8■■□□□ 1.24
LMCD1-204ENST00000426878 WDR43Q15061 677 aaKnown RBP eCLIP22.8■■□□□ 1.24
LMCD1-204ENST00000426878 BTBD11A6QL63 1104 aa22.79■■□□□ 1.24
LMCD1-204ENST00000426878 PHF14O94880 888 aa22.79■■□□□ 1.24
LMCD1-204ENST00000426878 POLD1P28340 1107 aa22.79■■□□□ 1.24
LMCD1-204ENST00000426878 CRKLP46109 303 aaKnown RBP22.79■■□□□ 1.24
LMCD1-204ENST00000426878 DCTN1Q14203 1278 aa22.79■■□□□ 1.24
LMCD1-204ENST00000426878 DNAJC10Q8IXB1 793 aa22.79■■□□□ 1.24
LMCD1-204ENST00000426878 ARXQ96QS3 562 aa22.79■■□□□ 1.24
LMCD1-204ENST00000426878 SMIM5Q71RC9 77 aa22.78■■□□□ 1.24
LMCD1-204ENST00000426878 ZNF496Q96IT1 587 aaPredicted RBP22.78■■□□□ 1.24
LMCD1-204ENST00000426878 CYP19A1P11511 503 aaPredicted RBP22.77■■□□□ 1.24
LMCD1-204ENST00000426878 TRAPPC3LQ5T215 181 aa22.77■■□□□ 1.24
LMCD1-204ENST00000426878 INTS5Q6P9B9 1019 aaKnown RBP22.77■■□□□ 1.24
LMCD1-204ENST00000426878 ADAMTS8Q9UP79 889 aa22.77■■□□□ 1.24
LMCD1-204ENST00000426878 TAF7Q15545 349 aaPredicted RBP22.76■■□□□ 1.23
LMCD1-204ENST00000426878 HEG1Q9ULI3 1381 aa22.76■■□□□ 1.23
LMCD1-204ENST00000426878 RUNDC1Q96C34 613 aa22.75■■□□□ 1.23
LMCD1-204ENST00000426878 FMNL2Q96PY5 1086 aa22.75■■□□□ 1.23
LMCD1-204ENST00000426878 TEX13AQ9BXU3 409 aaPredicted RBP22.75■■□□□ 1.23
LMCD1-204ENST00000426878 ARHGEF1Q92888 912 aaKnown RBP22.74■■□□□ 1.23
LMCD1-204ENST00000426878 CCDC87Q9NVE4 849 aa22.74■■□□□ 1.23
LMCD1-204ENST00000426878 ANP32CO43423 234 aa22.74■■□□□ 1.23
LMCD1-204ENST00000426878 STARD3NLO95772 234 aa22.74■■□□□ 1.23
LMCD1-204ENST00000426878 TMPOP42166 694 aaKnown RBP22.74■■□□□ 1.23
LMCD1-204ENST00000426878 KCNQ3O43525 872 aa22.73■■□□□ 1.23
LMCD1-204ENST00000426878 RIPK4P57078 832 aa22.73■■□□□ 1.23
LMCD1-204ENST00000426878 MSL1Q68DK7 614 aa22.73■■□□□ 1.23
LMCD1-204ENST00000426878 FHDC1Q9C0D6 1143 aaPredicted RBP22.73■■□□□ 1.23
LMCD1-204ENST00000426878 PNISRQ8TF01 805 aaKnown RBP22.72■■□□□ 1.23
LMCD1-204ENST00000426878 SYT17Q9BSW7 474 aa22.72■■□□□ 1.23
LMCD1-204ENST00000426878 RFC4P35249 363 aa22.71■■□□□ 1.23
LMCD1-204ENST00000426878 LMOD3Q0VAK6 560 aa22.71■■□□□ 1.23
LMCD1-204ENST00000426878 CCDC146Q8IYE0 955 aa22.71■■□□□ 1.23
LMCD1-204ENST00000426878 SOS1Q07889 1333 aaPredicted RBP22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms