RNA–Protein interactions for RNA: ENST00000424643.3

SDCBPP2-201, Transcript of syndecan binding protein pseudogene 2, humanhuman

BASIC

Gene SDCBPP2, Length 885 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP2-201ENST00000424643 CNKSR1Q969H4 720 aa7.22□□□□□ -1.25
SDCBPP2-201ENST00000424643 GRIP2Q9C0E4 1043 aa7.22□□□□□ -1.25
SDCBPP2-201ENST00000424643 TFIP11Q9UBB9 837 aaKnown RBP7.22□□□□□ -1.25
SDCBPP2-201ENST00000424643 CCDC9Q9Y3X0 531 aaKnown RBP7.22□□□□□ -1.25
SDCBPP2-201ENST00000424643 PIK3CDO00329 1044 aa7.21□□□□□ -1.26
SDCBPP2-201ENST00000424643 KRT76Q01546 638 aa7.21□□□□□ -1.26
SDCBPP2-201ENST00000424643 KCNMA1Q12791 1236 aa7.21□□□□□ -1.26
SDCBPP2-201ENST00000424643 NANOS1Q8WY41 292 aaKnown RBP7.21□□□□□ -1.26
SDCBPP2-201ENST00000424643 CNTNAP3BQ96NU0 1288 aa7.21□□□□□ -1.26
SDCBPP2-201ENST00000424643 ESYT1Q9BSJ8 1104 aa7.21□□□□□ -1.26
SDCBPP2-201ENST00000424643 CNTNAP3Q9BZ76 1288 aa7.21□□□□□ -1.26
SDCBPP2-201ENST00000424643 CUEDC1Q9NWM3 386 aaPredicted RBP7.21□□□□□ -1.26
SDCBPP2-201ENST00000424643 CHIC2Q9UKJ5 165 aa7.21□□□□□ -1.26
SDCBPP2-201ENST00000424643 CSB-PGBD3P0DP91 1061 aa7.2□□□□□ -1.26
SDCBPP2-201ENST00000424643 SRPK2P78362 688 aaKnown RBP7.2□□□□□ -1.26
SDCBPP2-201ENST00000424643 CENPCQ03188 943 aa7.2□□□□□ -1.26
SDCBPP2-201ENST00000424643 SV2AQ7L0J3 742 aa7.2□□□□□ -1.26
SDCBPP2-201ENST00000424643 PLPP7Q8NBV4 271 aa7.2□□□□□ -1.26
SDCBPP2-201ENST00000424643 COL25A1Q9BXS0 654 aaPredicted RBP7.2□□□□□ -1.26
SDCBPP2-201ENST00000424643 GSK3AP49840 483 aa7.19□□□□□ -1.26
SDCBPP2-201ENST00000424643 CDCA8Q53HL2 280 aa7.19□□□□□ -1.26
SDCBPP2-201ENST00000424643 RNFT1Q5M7Z0 435 aa7.19□□□□□ -1.26
SDCBPP2-201ENST00000424643 NBPF10Q6P3W6 841 aaKnown RBP7.19□□□□□ -1.26
SDCBPP2-201ENST00000424643 NBPF15Q8N660 670 aa7.19□□□□□ -1.26
SDCBPP2-201ENST00000424643 XAGE2Q96GT9 111 aa7.19□□□□□ -1.26
SDCBPP2-201ENST00000424643 MAP7D1Q3KQU3 841 aa7.18□□□□□ -1.26
SDCBPP2-201ENST00000424643 RIPOR1Q6ZS17 1223 aa7.18□□□□□ -1.26
SDCBPP2-201ENST00000424643 TBC1D9Q6ZT07 1266 aa7.18□□□□□ -1.26
SDCBPP2-201ENST00000424643 GAS2L1Q99501 681 aaPredicted RBP7.18□□□□□ -1.26
SDCBPP2-201ENST00000424643 ETNK1Q9HBU6 452 aa7.18□□□□□ -1.26
SDCBPP2-201ENST00000424643 USTQ9Y2C2 406 aa7.18□□□□□ -1.26
SDCBPP2-201ENST00000424643 MAFBQ9Y5Q3 323 aaPredicted RBP7.18□□□□□ -1.26
SDCBPP2-201ENST00000424643 SKIP12755 728 aa7.17□□□□□ -1.26
SDCBPP2-201ENST00000424643 PHKA2P46019 1235 aa7.17□□□□□ -1.26
SDCBPP2-201ENST00000424643 SIRT1Q96EB6 747 aa7.17□□□□□ -1.26
SDCBPP2-201ENST00000424643 ZSCAN10Q96SZ4 725 aaPredicted RBP7.17□□□□□ -1.26
SDCBPP2-201ENST00000424643 HRH3Q9Y5N1 445 aa7.17□□□□□ -1.26
SDCBPP2-201ENST00000424643 CARNS1A5YM72 827 aa7.16□□□□□ -1.26
SDCBPP2-201ENST00000424643 SPATA31C2B4DYI2 1134 aa7.16□□□□□ -1.26
SDCBPP2-201ENST00000424643 WASLO00401 505 aaPredicted RBP7.16□□□□□ -1.26
SDCBPP2-201ENST00000424643 RANGAP1P46060 587 aaPredicted RBP7.16□□□□□ -1.26
SDCBPP2-201ENST00000424643 DBN1Q16643 649 aa7.16□□□□□ -1.26
SDCBPP2-201ENST00000424643 ESCO1Q5FWF5 840 aa7.16□□□□□ -1.26
SDCBPP2-201ENST00000424643 TAS1R3Q7RTX0 852 aa7.16□□□□□ -1.26
SDCBPP2-201ENST00000424643 TIMMDC1Q9NPL8 285 aa7.16□□□□□ -1.26
SDCBPP2-201ENST00000424643 DYRK1BQ9Y463 629 aa7.16□□□□□ -1.26
SDCBPP2-201ENST00000424643 ATP9BO43861 1147 aa7.15□□□□□ -1.26
SDCBPP2-201ENST00000424643 SCNN1DP51172 638 aa7.15□□□□□ -1.26
SDCBPP2-201ENST00000424643 TMEM214Q6NUQ4 689 aaKnown RBP7.15□□□□□ -1.26
SDCBPP2-201ENST00000424643 NPM2Q86SE8 214 aaKnown RBP7.15□□□□□ -1.26
SDCBPP2-201ENST00000424643 FHDC1Q9C0D6 1143 aaPredicted RBP7.15□□□□□ -1.26
SDCBPP2-201ENST00000424643 GZF1Q9H116 711 aaPredicted RBP7.15□□□□□ -1.26
SDCBPP2-201ENST00000424643 GPR25O00155 361 aa7.14□□□□□ -1.27
SDCBPP2-201ENST00000424643 ATG7O95352 703 aa7.14□□□□□ -1.27
SDCBPP2-201ENST00000424643 GDF10P55107 478 aa7.14□□□□□ -1.27
SDCBPP2-201ENST00000424643 TRIM22Q8IYM9 498 aa7.14□□□□□ -1.27
SDCBPP2-201ENST00000424643 DEPDC4Q8N2C3 294 aa7.14□□□□□ -1.27
SDCBPP2-201ENST00000424643 TMEM151AQ8N4L1 468 aa7.14□□□□□ -1.27
SDCBPP2-201ENST00000424643 ZNF837Q96EG3 531 aaPredicted RBP7.14□□□□□ -1.27
SDCBPP2-201ENST00000424643 INHAP05111 366 aa7.13□□□□□ -1.27
SDCBPP2-201ENST00000424643 GTF2E1P29083 439 aaPredicted RBP7.13□□□□□ -1.27
SDCBPP2-201ENST00000424643 TLR1Q15399 786 aa7.13□□□□□ -1.27
SDCBPP2-201ENST00000424643 C4orf17Q53FE4 359 aa7.13□□□□□ -1.27
SDCBPP2-201ENST00000424643 WDR44Q5JSH3 913 aa7.13□□□□□ -1.27
SDCBPP2-201ENST00000424643 GNASQ5JWF2 1037 aa7.13□□□□□ -1.27
SDCBPP2-201ENST00000424643 GTPBP3Q969Y2 492 aaKnown RBP7.13□□□□□ -1.27
SDCBPP2-201ENST00000424643 GPAMQ9HCL2 828 aa7.13□□□□□ -1.27
SDCBPP2-201ENST00000424643 SERTAD1Q9UHV2 236 aa7.13□□□□□ -1.27
SDCBPP2-201ENST00000424643 GDF11O95390 407 aa7.12□□□□□ -1.27
SDCBPP2-201ENST00000424643 BRD1O95696 1058 aa7.12□□□□□ -1.27
SDCBPP2-201ENST00000424643 F11P03951 625 aa7.12□□□□□ -1.27
SDCBPP2-201ENST00000424643 RASSF7Q02833 373 aa7.12□□□□□ -1.27
SDCBPP2-201ENST00000424643 NCOA4Q13772 614 aa7.12□□□□□ -1.27
SDCBPP2-201ENST00000424643 GAS6Q14393 721 aa7.12□□□□□ -1.27
SDCBPP2-201ENST00000424643 EML3Q32P44 896 aa7.12□□□□□ -1.27
SDCBPP2-201ENST00000424643 TMCO4Q5TGY1 634 aa7.12□□□□□ -1.27
SDCBPP2-201ENST00000424643 VRTNQ9H8Y1 702 aa7.12□□□□□ -1.27
SDCBPP2-201ENST00000424643 PCDHGA11Q9Y5H2 935 aa7.12□□□□□ -1.27
SDCBPP2-201ENST00000424643 ZCCHC6Q5VYS8 1495 aaKnown RBP7.11□□□□□ -1.27
SDCBPP2-201ENST00000424643 PATL2C9JE40 543 aaKnown RBP7.11□□□□□ -1.27
SDCBPP2-201ENST00000424643 H7C1W4 665 aa7.11□□□□□ -1.27
SDCBPP2-201ENST00000424643 WHAMMQ8TF30 809 aa7.11□□□□□ -1.27
SDCBPP2-201ENST00000424643 NOD1Q9Y239 953 aa7.11□□□□□ -1.27
SDCBPP2-201ENST00000424643 USP17L3A6NCW0 530 aa7.1□□□□□ -1.27
SDCBPP2-201ENST00000424643 USP17L4A6NCW7 530 aa7.1□□□□□ -1.27
SDCBPP2-201ENST00000424643 TMEM88BA6NKF7 163 aa7.1□□□□□ -1.27
SDCBPP2-201ENST00000424643 USP17L5A8MUK1 530 aa7.1□□□□□ -1.27
SDCBPP2-201ENST00000424643 TMEM229AB2RXF0 380 aa7.1□□□□□ -1.27
SDCBPP2-201ENST00000424643 KCNA1Q09470 495 aa7.1□□□□□ -1.27
SDCBPP2-201ENST00000424643 KANK4Q5T7N3 995 aaPredicted RBP7.1□□□□□ -1.27
SDCBPP2-201ENST00000424643 USP17L2Q6R6M4 530 aa7.1□□□□□ -1.27
SDCBPP2-201ENST00000424643 USP17L1Q7RTZ2 530 aa7.1□□□□□ -1.27
SDCBPP2-201ENST00000424643 PPARGC1BQ86YN6 1023 aaKnown RBP7.1□□□□□ -1.27
SDCBPP2-201ENST00000424643 NFATC2IPQ8NCF5 419 aa7.1□□□□□ -1.27
SDCBPP2-201ENST00000424643 RHBDD1Q8TEB9 315 aa7.1□□□□□ -1.27
SDCBPP2-201ENST00000424643 ADAMTS2O95450 1211 aa7.09□□□□□ -1.27
SDCBPP2-201ENST00000424643 SMTNP53814 917 aa7.09□□□□□ -1.27
SDCBPP2-201ENST00000424643 GTF2IP78347 998 aa7.09□□□□□ -1.27
SDCBPP2-201ENST00000424643 PSME1Q06323 249 aa7.09□□□□□ -1.27
SDCBPP2-201ENST00000424643 FOXR1Q6PIV2 292 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms