RNA–Protein interactions for RNA: ENST00000424235.1

SNHG17-205, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2

Gene SNHG17, Length 764 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-205ENST00000424235 QSER1Q2KHR3 1735 aa21.72■■□□□ 1.07
SNHG17-205ENST00000424235 LOC102724428A0A0B4J2F2 783 aa21.72■■□□□ 1.07
SNHG17-205ENST00000424235 ATP6V1AP38606 617 aa21.72■■□□□ 1.07
SNHG17-205ENST00000424235 SIK1P57059 783 aa21.72■■□□□ 1.07
SNHG17-205ENST00000424235 MSL1Q68DK7 614 aa21.72■■□□□ 1.07
SNHG17-205ENST00000424235 COL24A1Q17RW2 1714 aa21.71■■□□□ 1.07
SNHG17-205ENST00000424235 ERVV-2B6SEH9 535 aa21.7■■□□□ 1.06
SNHG17-205ENST00000424235 CFAP53Q96M91 514 aa21.7■■□□□ 1.06
SNHG17-205ENST00000424235 GPR162Q16538 588 aa21.69■■□□□ 1.06
SNHG17-205ENST00000424235 COL23A1Q86Y22 540 aaPredicted RBP21.69■■□□□ 1.06
SNHG17-205ENST00000424235 FLAD1Q8NFF5 587 aa21.69■■□□□ 1.06
SNHG17-205ENST00000424235 NPC1L1Q9UHC9 1359 aa21.69■■□□□ 1.06
SNHG17-205ENST00000424235 ATG3Q9NT62 314 aa21.68■■□□□ 1.06
SNHG17-205ENST00000424235 KDRP35968 1356 aa21.67■■□□□ 1.06
SNHG17-205ENST00000424235 GNPATO15228 680 aa21.67■■□□□ 1.06
SNHG17-205ENST00000424235 PELP1Q8IZL8 1130 aaKnown RBP21.67■■□□□ 1.06
SNHG17-205ENST00000424235 KDM6AO15550 1401 aaPredicted RBP21.66■■□□□ 1.06
SNHG17-205ENST00000424235 LINC00116Q8NCU8 138 aa21.66■■□□□ 1.06
SNHG17-205ENST00000424235 C4BP0C0L5 1744 aa21.66■■□□□ 1.06
SNHG17-205ENST00000424235 AKAP4Q5JQC9 854 aa21.65■■□□□ 1.06
SNHG17-205ENST00000424235 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.64■■□□□ 1.05
SNHG17-205ENST00000424235 PTCD1O75127 700 aaKnown RBP21.64■■□□□ 1.05
SNHG17-205ENST00000424235 ITPK1Q13572 414 aa21.63■■□□□ 1.05
SNHG17-205ENST00000424235 NFATC2IPQ8NCF5 419 aa21.63■■□□□ 1.05
SNHG17-205ENST00000424235 CEP350Q5VT06 3117 aa21.62■■□□□ 1.05
SNHG17-205ENST00000424235 SMIM5Q71RC9 77 aa21.62■■□□□ 1.05
SNHG17-205ENST00000424235 NLGN2Q8NFZ4 835 aa21.62■■□□□ 1.05
SNHG17-205ENST00000424235 TAF1LQ8IZX4 1826 aa21.62■■□□□ 1.05
SNHG17-205ENST00000424235 NUDCQ9Y266 331 aa21.61■■□□□ 1.05
SNHG17-205ENST00000424235 GIGYF1O75420 1035 aaPredicted RBP21.6■■□□□ 1.05
SNHG17-205ENST00000424235 SSFA2P28290 1259 aa21.6■■□□□ 1.05
SNHG17-205ENST00000424235 MTHFSDQ2M296 383 aaKnown RBP21.59■■□□□ 1.05
SNHG17-205ENST00000424235 RTCBQ9Y3I0 505 aaKnown RBP21.59■■□□□ 1.05
SNHG17-205ENST00000424235 PPP2R1AP30153 589 aa21.57■■□□□ 1.04
SNHG17-205ENST00000424235 COL3A1P02461 1466 aaPredicted RBP21.57■■□□□ 1.04
SNHG17-205ENST00000424235 RNMTO43148 476 aaKnown RBP21.56■■□□□ 1.04
SNHG17-205ENST00000424235 U2AF1L5P0DN76 240 aaPredicted RBP21.56■■□□□ 1.04
SNHG17-205ENST00000424235 U2AF1Q01081 240 aaKnown RBP eCLIP21.56■■□□□ 1.04
SNHG17-205ENST00000424235 AMIGO3Q86WK7 504 aa21.56■■□□□ 1.04
SNHG17-205ENST00000424235 GAS2L2Q8NHY3 880 aa21.56■■□□□ 1.04
SNHG17-205ENST00000424235 SLC52A2Q9HAB3 445 aa21.56■■□□□ 1.04
SNHG17-205ENST00000424235 LGR6Q9HBX8 967 aa21.56■■□□□ 1.04
SNHG17-205ENST00000424235 TRAPPC3LQ5T215 181 aa21.55■■□□□ 1.04
SNHG17-205ENST00000424235 YBX3P16989 372 aaKnown RBP eCLIP21.54■■□□□ 1.04
SNHG17-205ENST00000424235 PRKAR2BP31323 418 aa21.54■■□□□ 1.04
SNHG17-205ENST00000424235 RFC4P35249 363 aa21.53■■□□□ 1.04
SNHG17-205ENST00000424235 TEFQ10587 303 aa21.53■■□□□ 1.04
SNHG17-205ENST00000424235 TTC5Q8N0Z6 440 aa21.53■■□□□ 1.04
SNHG17-205ENST00000424235 SLC4A9Q96Q91 983 aa21.53■■□□□ 1.04
SNHG17-205ENST00000424235 UBR3Q6ZT12 1888 aa21.52■■□□□ 1.04
SNHG17-205ENST00000424235 SLC39A6Q13433 755 aa21.52■■□□□ 1.04
SNHG17-205ENST00000424235 SCN11AQ9UI33 1791 aa21.51■■□□□ 1.03
SNHG17-205ENST00000424235 GNAT3A8MTJ3 354 aa21.51■■□□□ 1.03
SNHG17-205ENST00000424235 NEFMP07197 916 aa21.51■■□□□ 1.03
SNHG17-205ENST00000424235 CNTNAP4Q9C0A0 1308 aa21.51■■□□□ 1.03
SNHG17-205ENST00000424235 CRKLP46109 303 aaKnown RBP21.5■■□□□ 1.03
SNHG17-205ENST00000424235 RC3H1Q5TC82 1133 aaKnown RBP21.49■■□□□ 1.03
SNHG17-205ENST00000424235 RPS6KA4O75676 772 aa21.48■■□□□ 1.03
SNHG17-205ENST00000424235 ADRA2BP18089 450 aa21.48■■□□□ 1.03
SNHG17-205ENST00000424235 RTF1Q92541 710 aaKnown RBP21.48■■□□□ 1.03
SNHG17-205ENST00000424235 MMP10P09238 476 aa21.47■■□□□ 1.03
SNHG17-205ENST00000424235 DNAJC10Q8IXB1 793 aa21.47■■□□□ 1.03
SNHG17-205ENST00000424235 ARHGEF1Q92888 912 aaKnown RBP21.47■■□□□ 1.03
SNHG17-205ENST00000424235 RSPH6AQ9H0K4 717 aa21.47■■□□□ 1.03
SNHG17-205ENST00000424235 WWC3Q9ULE0 1092 aa21.47■■□□□ 1.03
SNHG17-205ENST00000424235 MRC1P22897 1456 aa21.46■■□□□ 1.03
SNHG17-205ENST00000424235 IFFO2Q5TF58 517 aa21.46■■□□□ 1.03
SNHG17-205ENST00000424235 CD2APQ9Y5K6 639 aa21.46■■□□□ 1.03
SNHG17-205ENST00000424235 ATP10DQ9P241 1426 aa21.46■■□□□ 1.03
SNHG17-205ENST00000424235 GRIN3BO60391 1043 aa21.45■■□□□ 1.02
SNHG17-205ENST00000424235 NLGN1Q8N2Q7 840 aa21.45■■□□□ 1.02
SNHG17-205ENST00000424235 PHACTR3Q96KR7 559 aa21.45■■□□□ 1.02
SNHG17-205ENST00000424235 ZNF831Q5JPB2 1677 aa21.44■■□□□ 1.02
SNHG17-205ENST00000424235 COL5A3P25940 1745 aaPredicted RBP21.44■■□□□ 1.02
SNHG17-205ENST00000424235 DDX10Q13206 875 aaKnown RBP21.44■■□□□ 1.02
SNHG17-205ENST00000424235 CCDC87Q9NVE4 849 aa21.44■■□□□ 1.02
SNHG17-205ENST00000424235 PARP3Q9Y6F1 533 aa21.43■■□□□ 1.02
SNHG17-205ENST00000424235 ZPR1O75312 459 aa21.42■■□□□ 1.02
SNHG17-205ENST00000424235 FCHSD2O94868 740 aa21.42■■□□□ 1.02
SNHG17-205ENST00000424235 ZNF330Q9Y3S2 320 aaPredicted RBP21.42■■□□□ 1.02
SNHG17-205ENST00000424235 TJP1Q07157 1748 aa21.41■■□□□ 1.02
SNHG17-205ENST00000424235 NPM2Q86SE8 214 aaKnown RBP21.41■■□□□ 1.02
SNHG17-205ENST00000424235 IL17REQ8NFR9 667 aa21.41■■□□□ 1.02
SNHG17-205ENST00000424235 SRP68Q9UHB9 627 aaKnown RBP21.41■■□□□ 1.02
SNHG17-205ENST00000424235 VIRMAQ69YN4 1812 aaKnown RBP21.41■■□□□ 1.02
SNHG17-205ENST00000424235 BTBD11A6QL63 1104 aa21.4■■□□□ 1.02
SNHG17-205ENST00000424235 STARD3NLO95772 234 aa21.4■■□□□ 1.02
SNHG17-205ENST00000424235 MAPK8IP3Q9UPT6 1336 aa21.39■■□□□ 1.01
SNHG17-205ENST00000424235 GYS1P13807 737 aa21.39■■□□□ 1.01
SNHG17-205ENST00000424235 CANXP27824 592 aaKnown RBP21.39■■□□□ 1.01
SNHG17-205ENST00000424235 INTS5Q6P9B9 1019 aaKnown RBP21.39■■□□□ 1.01
SNHG17-205ENST00000424235 KCPQ6ZWJ8 1503 aa21.39■■□□□ 1.01
SNHG17-205ENST00000424235 CICQ96RK0 1608 aaPredicted RBP21.38■■□□□ 1.01
SNHG17-205ENST00000424235 CYP19A1P11511 503 aaPredicted RBP21.38■■□□□ 1.01
SNHG17-205ENST00000424235 ZNF790Q6PG37 636 aa21.38■■□□□ 1.01
SNHG17-205ENST00000424235 MCM10Q7L590 875 aa21.38■■□□□ 1.01
SNHG17-205ENST00000424235 ADCY9O60503 1353 aa21.37■■□□□ 1.01
SNHG17-205ENST00000424235 USP42Q9H9J4 1324 aaKnown RBP21.37■■□□□ 1.01
SNHG17-205ENST00000424235 ZEB1P37275 1124 aaPredicted RBP21.37■■□□□ 1.01
SNHG17-205ENST00000424235 RALBP1Q15311 655 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms