RNA–Protein interactions for RNA: ENST00000423717.1

EPDR1-202, Transcript of ependymin related 1, humanhuman

TSL 1 (best) BASIC

Gene EPDR1, Length 638 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPDR1-202ENST00000423717 RUNDC1Q96C34 613 aa29.95■■■□□ 2.39
EPDR1-202ENST00000423717 ATG3Q9NT62 314 aa29.95■■■□□ 2.39
EPDR1-202ENST00000423717 LY75O60449 1722 aa29.95■■■□□ 2.38
EPDR1-202ENST00000423717 DLG5Q8TDM6 1919 aa29.94■■■□□ 2.38
EPDR1-202ENST00000423717 MCM10Q7L590 875 aa29.94■■■□□ 2.38
EPDR1-202ENST00000423717 PSDA5PKW4 1024 aaPredicted RBP29.93■■■□□ 2.38
EPDR1-202ENST00000423717 DCTN1Q14203 1278 aa29.93■■■□□ 2.38
EPDR1-202ENST00000423717 SLC27A3Q5K4L6 730 aa29.93■■■□□ 2.38
EPDR1-202ENST00000423717 RBM42Q9BTD8 480 aaKnown RBP29.93■■■□□ 2.38
EPDR1-202ENST00000423717 LRRC4BQ9NT99 713 aa29.93■■■□□ 2.38
EPDR1-202ENST00000423717 NEUROD2Q15784 382 aa29.92■■■□□ 2.38
EPDR1-202ENST00000423717 R3HDM1Q15032 1099 aaKnown RBP29.91■■■□□ 2.38
EPDR1-202ENST00000423717 RRP7AQ9Y3A4 280 aaKnown RBP29.91■■■□□ 2.38
EPDR1-202ENST00000423717 ADAMTS7Q9UKP4 1686 aa29.91■■■□□ 2.38
EPDR1-202ENST00000423717 STK32BQ9NY57 414 aa29.9■■■□□ 2.38
EPDR1-202ENST00000423717 RIPK4P57078 832 aa29.89■■■□□ 2.38
EPDR1-202ENST00000423717 HTATSF1O43719 755 aaKnown RBP29.88■■■□□ 2.37
EPDR1-202ENST00000423717 SLC39A6Q13433 755 aa29.88■■■□□ 2.37
EPDR1-202ENST00000423717 PNISRQ8TF01 805 aaKnown RBP29.88■■■□□ 2.37
EPDR1-202ENST00000423717 MRC1P22897 1456 aa29.87■■■□□ 2.37
EPDR1-202ENST00000423717 LOC102724428A0A0B4J2F2 783 aa29.87■■■□□ 2.37
EPDR1-202ENST00000423717 PTCD1O75127 700 aaKnown RBP29.87■■■□□ 2.37
EPDR1-202ENST00000423717 TMPOP42166 694 aaKnown RBP29.87■■■□□ 2.37
EPDR1-202ENST00000423717 SIK1P57059 783 aa29.87■■■□□ 2.37
EPDR1-202ENST00000423717 ANO8Q9HCE9 1232 aaPredicted RBP29.87■■■□□ 2.37
EPDR1-202ENST00000423717 ATP6V1AP38606 617 aa29.86■■■□□ 2.37
EPDR1-202ENST00000423717 FAM9BQ8IZU0 186 aa29.85■■■□□ 2.37
EPDR1-202ENST00000423717 CEMIPQ8WUJ3 1361 aa29.84■■■□□ 2.37
EPDR1-202ENST00000423717 TTC5Q8N0Z6 440 aa29.83■■■□□ 2.37
EPDR1-202ENST00000423717 THUMPD2Q9BTF0 503 aaKnown RBP29.83■■■□□ 2.37
EPDR1-202ENST00000423717 BTBD11A6QL63 1104 aa29.82■■■□□ 2.36
EPDR1-202ENST00000423717 SLC15A2Q16348 729 aa29.82■■■□□ 2.36
EPDR1-202ENST00000423717 SIPA1L3O60292 1781 aaPredicted RBP29.82■■■□□ 2.36
EPDR1-202ENST00000423717 C5P01031 1676 aa29.82■■■□□ 2.36
EPDR1-202ENST00000423717 SENP3-EIF4A1A0A087X0R7 540 aa29.81■■■□□ 2.36
EPDR1-202ENST00000423717 APAF1O14727 1248 aa29.81■■■□□ 2.36
EPDR1-202ENST00000423717 LMOD3Q0VAK6 560 aa29.81■■■□□ 2.36
EPDR1-202ENST00000423717 ZNF827Q17R98 1081 aa29.8■■■□□ 2.36
EPDR1-202ENST00000423717 TAF1LQ8IZX4 1826 aa29.8■■■□□ 2.36
EPDR1-202ENST00000423717 PAPPAQ13219 1627 aa29.79■■■□□ 2.36
EPDR1-202ENST00000423717 ITPK1Q13572 414 aa29.78■■■□□ 2.36
EPDR1-202ENST00000423717 TFCP2L1Q9NZI6 479 aa29.78■■■□□ 2.36
EPDR1-202ENST00000423717 HMGB2P26583 209 aaKnown RBP29.77■■■□□ 2.36
EPDR1-202ENST00000423717 TAF7Q15545 349 aaPredicted RBP29.76■■■□□ 2.35
EPDR1-202ENST00000423717 ZNF790Q6PG37 636 aa29.76■■■□□ 2.35
EPDR1-202ENST00000423717 LINC00116Q8NCU8 138 aa29.76■■■□□ 2.35
EPDR1-202ENST00000423717 AKT1S1Q96B36 256 aa29.76■■■□□ 2.35
EPDR1-202ENST00000423717 SLC4A9Q96Q91 983 aa29.76■■■□□ 2.35
EPDR1-202ENST00000423717 AK7Q96M32 723 aa29.75■■■□□ 2.35
EPDR1-202ENST00000423717 MIS18AQ9NYP9 233 aa29.75■■■□□ 2.35
EPDR1-202ENST00000423717 MIER1Q8N108 512 aa29.74■■■□□ 2.35
EPDR1-202ENST00000423717 C4BP0C0L5 1744 aa29.74■■■□□ 2.35
EPDR1-202ENST00000423717 KCNQ3O43525 872 aa29.73■■■□□ 2.35
EPDR1-202ENST00000423717 CCER2I3L3R5 266 aa29.72■■■□□ 2.35
EPDR1-202ENST00000423717 MSH5O43196 834 aa29.72■■■□□ 2.35
EPDR1-202ENST00000423717 TRIM35Q9UPQ4 493 aa29.72■■■□□ 2.35
EPDR1-202ENST00000423717 KCPQ6ZWJ8 1503 aa29.71■■■□□ 2.35
EPDR1-202ENST00000423717 LAS1LQ9Y4W2 734 aaKnown RBP29.71■■■□□ 2.35
EPDR1-202ENST00000423717 UBR2Q8IWV8 1755 aa29.7■■■□□ 2.35
EPDR1-202ENST00000423717 DNAJC10Q8IXB1 793 aa29.7■■■□□ 2.35
EPDR1-202ENST00000423717 ZNF496Q96IT1 587 aaPredicted RBP29.7■■■□□ 2.35
EPDR1-202ENST00000423717 FMNL2Q96PY5 1086 aa29.7■■■□□ 2.35
EPDR1-202ENST00000423717 ZNF831Q5JPB2 1677 aa29.69■■■□□ 2.34
EPDR1-202ENST00000423717 TUBGCP6Q96RT7 1819 aa29.68■■■□□ 2.34
EPDR1-202ENST00000423717 TJP1Q07157 1748 aa29.68■■■□□ 2.34
EPDR1-202ENST00000423717 PHF14O94880 888 aa29.68■■■□□ 2.34
EPDR1-202ENST00000423717 PDGFDQ9GZP0 370 aaPredicted RBP29.68■■■□□ 2.34
EPDR1-202ENST00000423717 SALL2Q9Y467 1007 aaPredicted RBP29.68■■■□□ 2.34
EPDR1-202ENST00000423717 GNPATO15228 680 aa29.67■■■□□ 2.34
EPDR1-202ENST00000423717 COL5A3P25940 1745 aaPredicted RBP29.66■■■□□ 2.34
EPDR1-202ENST00000423717 TSPYL4Q9UJ04 414 aa29.66■■■□□ 2.34
EPDR1-202ENST00000423717 HEG1Q9ULI3 1381 aa29.65■■■□□ 2.34
EPDR1-202ENST00000423717 SMIM5Q71RC9 77 aa29.65■■■□□ 2.34
EPDR1-202ENST00000423717 VSIG10Q8N0Z9 540 aa29.65■■■□□ 2.34
EPDR1-202ENST00000423717 PNPLA7Q6ZV29 1317 aa29.65■■■□□ 2.34
EPDR1-202ENST00000423717 CRKLP46109 303 aaKnown RBP29.63■■■□□ 2.33
EPDR1-202ENST00000423717 QSER1Q2KHR3 1735 aa29.62■■■□□ 2.33
EPDR1-202ENST00000423717 KDM3BQ7LBC6 1761 aa29.62■■■□□ 2.33
EPDR1-202ENST00000423717 ZBTB7AO95365 584 aa29.62■■■□□ 2.33
EPDR1-202ENST00000423717 RTCBQ9Y3I0 505 aaKnown RBP29.61■■■□□ 2.33
EPDR1-202ENST00000423717 CNTNAP4Q9C0A0 1308 aa29.61■■■□□ 2.33
EPDR1-202ENST00000423717 CASZ1Q86V15 1759 aa29.61■■■□□ 2.33
EPDR1-202ENST00000423717 UBR3Q6ZT12 1888 aa29.61■■■□□ 2.33
EPDR1-202ENST00000423717 STARD3NLO95772 234 aa29.6■■■□□ 2.33
EPDR1-202ENST00000423717 RC3H1Q5TC82 1133 aaKnown RBP29.6■■■□□ 2.33
EPDR1-202ENST00000423717 COL23A1Q86Y22 540 aaPredicted RBP29.6■■■□□ 2.33
EPDR1-202ENST00000423717 FLAD1Q8NFF5 587 aa29.6■■■□□ 2.33
EPDR1-202ENST00000423717 TEX13AQ9BXU3 409 aaPredicted RBP29.6■■■□□ 2.33
EPDR1-202ENST00000423717 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.59■■■□□ 2.33
EPDR1-202ENST00000423717 CYP19A1P11511 503 aaPredicted RBP29.59■■■□□ 2.33
EPDR1-202ENST00000423717 CALD1Q05682 793 aaKnown RBP29.59■■■□□ 2.33
EPDR1-202ENST00000423717 CCDC87Q9NVE4 849 aa29.59■■■□□ 2.33
EPDR1-202ENST00000423717 ATF5Q9Y2D1 282 aaPredicted RBP29.59■■■□□ 2.33
EPDR1-202ENST00000423717 CICQ96RK0 1608 aaPredicted RBP29.59■■■□□ 2.33
EPDR1-202ENST00000423717 SNRPA1P09661 255 aaKnown RBP29.58■■■□□ 2.33
EPDR1-202ENST00000423717 MYH14Q7Z406 1995 aaKnown RBP29.58■■■□□ 2.33
EPDR1-202ENST00000423717 AMIGO3Q86WK7 504 aa29.58■■■□□ 2.33
EPDR1-202ENST00000423717 PRAMEF22A3QJZ6 481 aa29.57■■■□□ 2.32
EPDR1-202ENST00000423717 SSFA2P28290 1259 aa29.57■■■□□ 2.32
EPDR1-202ENST00000423717 RPS6KA4O75676 772 aa29.56■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms