RNA–Protein interactions for RNA: ENST00000421710.5

SNAPC3-203, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 5

Gene SNAPC3, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-203ENST00000421710 U2AF1L5P0DN76 240 aaPredicted RBP33.51■■■□□ 2.95
SNAPC3-203ENST00000421710 U2AF1Q01081 240 aaKnown RBP eCLIP33.51■■■□□ 2.95
SNAPC3-203ENST00000421710 ATF5Q9Y2D1 282 aaPredicted RBP33.51■■■□□ 2.95
SNAPC3-203ENST00000421710 ZNF831Q5JPB2 1677 aa33.51■■■□□ 2.95
SNAPC3-203ENST00000421710 ATP6V1AP38606 617 aa33.5■■■□□ 2.95
SNAPC3-203ENST00000421710 NFATC2IPQ8NCF5 419 aa33.5■■■□□ 2.95
SNAPC3-203ENST00000421710 FLAD1Q8NFF5 587 aa33.5■■■□□ 2.95
SNAPC3-203ENST00000421710 VIRMAQ69YN4 1812 aaKnown RBP33.49■■■□□ 2.95
SNAPC3-203ENST00000421710 AK7Q96M32 723 aa33.49■■■□□ 2.95
SNAPC3-203ENST00000421710 RSPH6AQ9H0K4 717 aa33.49■■■□□ 2.95
SNAPC3-203ENST00000421710 MRC1P22897 1456 aa33.49■■■□□ 2.95
SNAPC3-203ENST00000421710 RNMTO43148 476 aaKnown RBP33.48■■■□□ 2.95
SNAPC3-203ENST00000421710 PRKAR2BP31323 418 aa33.48■■■□□ 2.95
SNAPC3-203ENST00000421710 ADAMTS7Q9UKP4 1686 aa33.48■■■□□ 2.95
SNAPC3-203ENST00000421710 PTGER2P43116 358 aa33.47■■■□□ 2.95
SNAPC3-203ENST00000421710 SLC52A2Q9HAB3 445 aa33.47■■■□□ 2.95
SNAPC3-203ENST00000421710 FCHSD2O94868 740 aa33.46■■■□□ 2.95
SNAPC3-203ENST00000421710 RBM42Q9BTD8 480 aaKnown RBP33.46■■■□□ 2.95
SNAPC3-203ENST00000421710 MAP3K5Q99683 1374 aa33.46■■■□□ 2.95
SNAPC3-203ENST00000421710 LGR6Q9HBX8 967 aa33.45■■■□□ 2.95
SNAPC3-203ENST00000421710 GNAT3A8MTJ3 354 aa33.43■■■□□ 2.94
SNAPC3-203ENST00000421710 MSH5O43196 834 aa33.43■■■□□ 2.94
SNAPC3-203ENST00000421710 ITPK1Q13572 414 aa33.43■■■□□ 2.94
SNAPC3-203ENST00000421710 LINC00116Q8NCU8 138 aa33.43■■■□□ 2.94
SNAPC3-203ENST00000421710 COL23A1Q86Y22 540 aaPredicted RBP33.41■■■□□ 2.94
SNAPC3-203ENST00000421710 SGIP1Q9BQI5 828 aa33.41■■■□□ 2.94
SNAPC3-203ENST00000421710 UBR3Q6ZT12 1888 aa33.41■■■□□ 2.94
SNAPC3-203ENST00000421710 POLD1P28340 1107 aa33.4■■■□□ 2.94
SNAPC3-203ENST00000421710 COL24A1Q17RW2 1714 aa33.39■■■□□ 2.94
SNAPC3-203ENST00000421710 SSFA2P28290 1259 aa33.39■■■□□ 2.94
SNAPC3-203ENST00000421710 PHACTR3Q96KR7 559 aa33.39■■■□□ 2.94
SNAPC3-203ENST00000421710 NEFMP07197 916 aa33.38■■■□□ 2.93
SNAPC3-203ENST00000421710 COL5A3P25940 1745 aaPredicted RBP33.37■■■□□ 2.93
SNAPC3-203ENST00000421710 MYBBP1AQ9BQG0 1328 aaKnown RBP33.37■■■□□ 2.93
SNAPC3-203ENST00000421710 PTCD1O75127 700 aaKnown RBP33.37■■■□□ 2.93
SNAPC3-203ENST00000421710 SLC4A9Q96Q91 983 aa33.37■■■□□ 2.93
SNAPC3-203ENST00000421710 CICQ96RK0 1608 aaPredicted RBP33.36■■■□□ 2.93
SNAPC3-203ENST00000421710 GNPATO15228 680 aa33.35■■■□□ 2.93
SNAPC3-203ENST00000421710 TEFQ10587 303 aa33.35■■■□□ 2.93
SNAPC3-203ENST00000421710 ARXQ96QS3 562 aa33.35■■■□□ 2.93
SNAPC3-203ENST00000421710 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP33.34■■■□□ 2.93
SNAPC3-203ENST00000421710 PNNQ9H307 717 aaKnown RBP33.34■■■□□ 2.93
SNAPC3-203ENST00000421710 CNTNAP4Q9C0A0 1308 aa33.33■■■□□ 2.93
SNAPC3-203ENST00000421710 PHF14O94880 888 aa33.33■■■□□ 2.93
SNAPC3-203ENST00000421710 RC3H1Q5TC82 1133 aaKnown RBP33.33■■■□□ 2.93
SNAPC3-203ENST00000421710 IL17REQ8NFR9 667 aa33.31■■■□□ 2.92
SNAPC3-203ENST00000421710 RTF1Q92541 710 aaKnown RBP33.3■■■□□ 2.92
SNAPC3-203ENST00000421710 RTCBQ9Y3I0 505 aaKnown RBP33.3■■■□□ 2.92
SNAPC3-203ENST00000421710 CEMIPQ8WUJ3 1361 aa33.3■■■□□ 2.92
SNAPC3-203ENST00000421710 TJP1Q07157 1748 aa33.29■■■□□ 2.92
SNAPC3-203ENST00000421710 TTC5Q8N0Z6 440 aa33.29■■■□□ 2.92
SNAPC3-203ENST00000421710 SIPA1L3O60292 1781 aaPredicted RBP33.29■■■□□ 2.92
SNAPC3-203ENST00000421710 SLC39A6Q13433 755 aa33.28■■■□□ 2.92
SNAPC3-203ENST00000421710 FHDC1Q9C0D6 1143 aaPredicted RBP33.28■■■□□ 2.92
SNAPC3-203ENST00000421710 ADRA2BP18089 450 aa33.27■■■□□ 2.92
SNAPC3-203ENST00000421710 AMIGO3Q86WK7 504 aa33.27■■■□□ 2.92
SNAPC3-203ENST00000421710 KCPQ6ZWJ8 1503 aa33.27■■■□□ 2.92
SNAPC3-203ENST00000421710 UBR2Q8IWV8 1755 aa33.26■■■□□ 2.92
SNAPC3-203ENST00000421710 HTATSF1O43719 755 aaKnown RBP33.26■■■□□ 2.91
SNAPC3-203ENST00000421710 DCAF8L1A6NGE4 600 aa33.25■■■□□ 2.91
SNAPC3-203ENST00000421710 VSIG10Q8N0Z9 540 aa33.25■■■□□ 2.91
SNAPC3-203ENST00000421710 TRAPPC3LQ5T215 181 aa33.24■■■□□ 2.91
SNAPC3-203ENST00000421710 MSL1Q68DK7 614 aa33.24■■■□□ 2.91
SNAPC3-203ENST00000421710 PRKRIP1Q9H875 184 aaPredicted RBP33.24■■■□□ 2.91
SNAPC3-203ENST00000421710 MAPK8IP3Q9UPT6 1336 aa33.24■■■□□ 2.91
SNAPC3-203ENST00000421710 RPS6KA4O75676 772 aa33.23■■■□□ 2.91
SNAPC3-203ENST00000421710 CRKLP46109 303 aaKnown RBP33.23■■■□□ 2.91
SNAPC3-203ENST00000421710 SYT17Q9BSW7 474 aa33.23■■■□□ 2.91
SNAPC3-203ENST00000421710 PLEKHF1Q96S99 279 aa33.22■■■□□ 2.91
SNAPC3-203ENST00000421710 MYH14Q7Z406 1995 aaKnown RBP33.21■■■□□ 2.91
SNAPC3-203ENST00000421710 ZNF316A6NFI3 1004 aaPredicted RBP33.21■■■□□ 2.91
SNAPC3-203ENST00000421710 ZNF790Q6PG37 636 aa33.21■■■□□ 2.91
SNAPC3-203ENST00000421710 SMIM5Q71RC9 77 aa33.2■■■□□ 2.91
SNAPC3-203ENST00000421710 DNAJC10Q8IXB1 793 aa33.2■■■□□ 2.91
SNAPC3-203ENST00000421710 BTBD11A6QL63 1104 aa33.18■■■□□ 2.9
SNAPC3-203ENST00000421710 MCM10Q7L590 875 aa33.18■■■□□ 2.9
SNAPC3-203ENST00000421710 RFC4P35249 363 aa33.17■■■□□ 2.9
SNAPC3-203ENST00000421710 CCDC87Q9NVE4 849 aa33.17■■■□□ 2.9
SNAPC3-203ENST00000421710 NFE2L2Q16236 605 aa33.16■■■□□ 2.9
SNAPC3-203ENST00000421710 KLHL34Q8N239 644 aa33.16■■■□□ 2.9
SNAPC3-203ENST00000421710 ARHGEF1Q92888 912 aaKnown RBP33.16■■■□□ 2.9
SNAPC3-203ENST00000421710 DLG5Q8TDM6 1919 aa33.16■■■□□ 2.9
SNAPC3-203ENST00000421710 TEX13AQ9BXU3 409 aaPredicted RBP33.15■■■□□ 2.9
SNAPC3-203ENST00000421710 HEG1Q9ULI3 1381 aa33.14■■■□□ 2.9
SNAPC3-203ENST00000421710 CYP19A1P11511 503 aaPredicted RBP33.14■■■□□ 2.9
SNAPC3-203ENST00000421710 WDR43Q15061 677 aaKnown RBP eCLIP33.14■■■□□ 2.9
SNAPC3-203ENST00000421710 ZNF496Q96IT1 587 aaPredicted RBP33.14■■■□□ 2.9
SNAPC3-203ENST00000421710 FMNL2Q96PY5 1086 aa33.14■■■□□ 2.9
SNAPC3-203ENST00000421710 C4AP0C0L4 1744 aa33.14■■■□□ 2.89
SNAPC3-203ENST00000421710 STARD3NLO95772 234 aa33.13■■■□□ 2.89
SNAPC3-203ENST00000421710 INTS5Q6P9B9 1019 aaKnown RBP33.13■■■□□ 2.89
SNAPC3-203ENST00000421710 NLGN1Q8N2Q7 840 aa33.12■■■□□ 2.89
SNAPC3-203ENST00000421710 DCTN1Q14203 1278 aa33.11■■■□□ 2.89
SNAPC3-203ENST00000421710 TAF7Q15545 349 aaPredicted RBP33.08■■■□□ 2.89
SNAPC3-203ENST00000421710 SOS1Q07889 1333 aaPredicted RBP33.07■■■□□ 2.88
SNAPC3-203ENST00000421710 CD2APQ9Y5K6 639 aa33.07■■■□□ 2.88
SNAPC3-203ENST00000421710 GYS1P13807 737 aa33.06■■■□□ 2.88
SNAPC3-203ENST00000421710 PNISRQ8TF01 805 aaKnown RBP33.06■■■□□ 2.88
SNAPC3-203ENST00000421710 ZBTB1Q9Y2K1 713 aa33.06■■■□□ 2.88
SNAPC3-203ENST00000421710 USP42Q9H9J4 1324 aaKnown RBP33.05■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms