RNA–Protein interactions for RNA: ENST00000421434.5

SCRN1-204, Transcript of secernin 1, humanhuman

TSL 3

Gene SCRN1, Length 1,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-204ENST00000421434 MMP10P09238 476 aa12.91□□□□□ -0.34
SCRN1-204ENST00000421434 TRAPPC3LQ5T215 181 aa12.91□□□□□ -0.34
SCRN1-204ENST00000421434 PANK3Q9H999 370 aa12.9□□□□□ -0.34
SCRN1-204ENST00000421434 RTCBQ9Y3I0 505 aaKnown RBP12.9□□□□□ -0.34
SCRN1-204ENST00000421434 MAP2P11137 1827 aaKnown RBP12.9□□□□□ -0.34
SCRN1-204ENST00000421434 PKD1L3Q7Z443 1732 aa12.89□□□□□ -0.35
SCRN1-204ENST00000421434 PLEKHO1Q53GL0 409 aaPredicted RBP12.89□□□□□ -0.35
SCRN1-204ENST00000421434 SLC4A9Q96Q91 983 aa12.89□□□□□ -0.35
SCRN1-204ENST00000421434 ERVV-2B6SEH9 535 aa12.88□□□□□ -0.35
SCRN1-204ENST00000421434 ARHGEF1Q92888 912 aaKnown RBP12.88□□□□□ -0.35
SCRN1-204ENST00000421434 DCAF5Q96JK2 942 aa12.88□□□□□ -0.35
SCRN1-204ENST00000421434 A0A0G2JLW4 131 aa12.87□□□□□ -0.35
SCRN1-204ENST00000421434 PTCD1O75127 700 aaKnown RBP12.87□□□□□ -0.35
SCRN1-204ENST00000421434 HSP90AB1P08238 724 aaKnown RBP12.87□□□□□ -0.35
SCRN1-204ENST00000421434 HSPA5P11021 654 aaKnown RBP12.87□□□□□ -0.35
SCRN1-204ENST00000421434 CABP4P57796 275 aa12.87□□□□□ -0.35
SCRN1-204ENST00000421434 EIF4G2P78344 907 aaKnown RBP eCLIP12.87□□□□□ -0.35
SCRN1-204ENST00000421434 ZNF530Q6P9A1 599 aaPredicted RBP12.87□□□□□ -0.35
SCRN1-204ENST00000421434 NLGN1Q8N2Q7 840 aa12.87□□□□□ -0.35
SCRN1-204ENST00000421434 UBR3Q6ZT12 1888 aa12.87□□□□□ -0.35
SCRN1-204ENST00000421434 RFC4P35249 363 aa12.86□□□□□ -0.35
SCRN1-204ENST00000421434 MTHFSP49914 203 aa12.86□□□□□ -0.35
SCRN1-204ENST00000421434 MORC1Q86VD1 984 aa12.86□□□□□ -0.35
SCRN1-204ENST00000421434 AEBP1Q8IUX7 1158 aa12.86□□□□□ -0.35
SCRN1-204ENST00000421434 BCS1LQ9Y276 419 aa12.86□□□□□ -0.35
SCRN1-204ENST00000421434 RPS6KA4O75676 772 aa12.85□□□□□ -0.35
SCRN1-204ENST00000421434 AMOTQ4VCS5 1084 aa12.85□□□□□ -0.35
SCRN1-204ENST00000421434 RC3H1Q5TC82 1133 aaKnown RBP12.85□□□□□ -0.35
SCRN1-204ENST00000421434 NFATC2IPQ8NCF5 419 aa12.85□□□□□ -0.35
SCRN1-204ENST00000421434 ADCY9O60503 1353 aa12.84□□□□□ -0.35
SCRN1-204ENST00000421434 GYS1P13807 737 aa12.84□□□□□ -0.35
SCRN1-204ENST00000421434 TGFB2P61812 414 aa12.84□□□□□ -0.35
SCRN1-204ENST00000421434 C1orf141Q5JVX7 400 aa12.84□□□□□ -0.35
SCRN1-204ENST00000421434 SULT6B1Q6IMI4 303 aa12.84□□□□□ -0.35
SCRN1-204ENST00000421434 ARHGAP27Q6ZUM4 889 aa12.84□□□□□ -0.35
SCRN1-204ENST00000421434 ANKRD26Q9UPS8 1709 aa12.83□□□□□ -0.36
SCRN1-204ENST00000421434 DPEP1P16444 411 aa12.83□□□□□ -0.36
SCRN1-204ENST00000421434 HSPA6P17066 643 aa12.83□□□□□ -0.36
SCRN1-204ENST00000421434 PARP3Q9Y6F1 533 aa12.83□□□□□ -0.36
SCRN1-204ENST00000421434 KDRP35968 1356 aa12.82□□□□□ -0.36
SCRN1-204ENST00000421434 FCHSD2O94868 740 aa12.82□□□□□ -0.36
SCRN1-204ENST00000421434 ADRA2BP18089 450 aa12.82□□□□□ -0.36
SCRN1-204ENST00000421434 CCDC87Q9NVE4 849 aa12.82□□□□□ -0.36
SCRN1-204ENST00000421434 SRP68Q9UHB9 627 aaKnown RBP12.82□□□□□ -0.36
SCRN1-204ENST00000421434 KNSTRNQ9Y448 316 aa12.82□□□□□ -0.36
SCRN1-204ENST00000421434 CNTNAP4Q9C0A0 1308 aa12.82□□□□□ -0.36
SCRN1-204ENST00000421434 CLSPNQ9HAW4 1339 aa12.82□□□□□ -0.36
SCRN1-204ENST00000421434 KDM6AO15550 1401 aaPredicted RBP12.81□□□□□ -0.36
SCRN1-204ENST00000421434 PXDNLA1KZ92 1463 aa12.81□□□□□ -0.36
SCRN1-204ENST00000421434 KIF3CO14782 793 aa12.81□□□□□ -0.36
SCRN1-204ENST00000421434 CRKLP46109 303 aaKnown RBP12.81□□□□□ -0.36
SCRN1-204ENST00000421434 IL13P35225 146 aa12.8□□□□□ -0.36
SCRN1-204ENST00000421434 FKBP8Q14318 412 aa12.8□□□□□ -0.36
SCRN1-204ENST00000421434 CICQ96RK0 1608 aaPredicted RBP12.8□□□□□ -0.36
SCRN1-204ENST00000421434 KCNA3P22001 575 aa12.79□□□□□ -0.36
SCRN1-204ENST00000421434 LGR6Q9HBX8 967 aa12.79□□□□□ -0.36
SCRN1-204ENST00000421434 IFFO2Q5TF58 517 aa12.78□□□□□ -0.36
SCRN1-204ENST00000421434 CCER1Q8TC90 406 aaPredicted RBP12.78□□□□□ -0.36
SCRN1-204ENST00000421434 PLEKHG2Q9H7P9 1386 aa12.78□□□□□ -0.36
SCRN1-204ENST00000421434 C10orf71Q711Q0 1435 aa12.78□□□□□ -0.36
SCRN1-204ENST00000421434 N4BP2Q86UW6 1770 aaPredicted RBP12.77□□□□□ -0.36
SCRN1-204ENST00000421434 HMOX1P09601 288 aa12.77□□□□□ -0.37
SCRN1-204ENST00000421434 DDR1Q08345 913 aa12.77□□□□□ -0.37
SCRN1-204ENST00000421434 SLC39A6Q13433 755 aa12.77□□□□□ -0.37
SCRN1-204ENST00000421434 INTS5Q6P9B9 1019 aaKnown RBP12.77□□□□□ -0.37
SCRN1-204ENST00000421434 DNAJC10Q8IXB1 793 aa12.77□□□□□ -0.37
SCRN1-204ENST00000421434 NMRK2Q9NPI5 230 aa12.77□□□□□ -0.37
SCRN1-204ENST00000421434 PIM2Q9P1W9 311 aa12.77□□□□□ -0.37
SCRN1-204ENST00000421434 CHRNA5P30532 468 aa12.76□□□□□ -0.37
SCRN1-204ENST00000421434 AKAP4Q5JQC9 854 aa12.76□□□□□ -0.37
SCRN1-204ENST00000421434 C9orf131Q5VYM1 1079 aa12.76□□□□□ -0.37
SCRN1-204ENST00000421434 USP42Q9H9J4 1324 aaKnown RBP12.76□□□□□ -0.37
SCRN1-204ENST00000421434 ZPR1O75312 459 aa12.75□□□□□ -0.37
SCRN1-204ENST00000421434 TOMM70O94826 608 aa12.75□□□□□ -0.37
SCRN1-204ENST00000421434 CNGB1Q14028 1251 aaPredicted RBP12.75□□□□□ -0.37
SCRN1-204ENST00000421434 DALRD3Q5D0E6 543 aaKnown RBP12.75□□□□□ -0.37
SCRN1-204ENST00000421434 AMER1Q5JTC6 1135 aaPredicted RBP12.75□□□□□ -0.37
SCRN1-204ENST00000421434 USPL1Q5W0Q7 1092 aa12.75□□□□□ -0.37
SCRN1-204ENST00000421434 MYH14Q7Z406 1995 aaKnown RBP12.75□□□□□ -0.37
SCRN1-204ENST00000421434 SLC52A2Q9HAB3 445 aa12.75□□□□□ -0.37
SCRN1-204ENST00000421434 RNMTO43148 476 aaKnown RBP12.74□□□□□ -0.37
SCRN1-204ENST00000421434 TM4SF1P30408 202 aa12.74□□□□□ -0.37
SCRN1-204ENST00000421434 C4AP0C0L4 1744 aa12.74□□□□□ -0.37
SCRN1-204ENST00000421434 POLRMTO00411 1230 aaKnown RBP12.73□□□□□ -0.37
SCRN1-204ENST00000421434 CYP19A1P11511 503 aaPredicted RBP12.73□□□□□ -0.37
SCRN1-204ENST00000421434 APLP1P51693 650 aa12.73□□□□□ -0.37
SCRN1-204ENST00000421434 CC2D1BQ5T0F9 858 aaKnown RBP12.73□□□□□ -0.37
SCRN1-204ENST00000421434 KIF13BQ9NQT8 1826 aa12.72□□□□□ -0.37
SCRN1-204ENST00000421434 COL5A3P25940 1745 aaPredicted RBP12.72□□□□□ -0.37
SCRN1-204ENST00000421434 MTHFSDQ2M296 383 aaKnown RBP12.72□□□□□ -0.37
SCRN1-204ENST00000421434 C16orf71Q8IYS4 520 aaPredicted RBP12.72□□□□□ -0.37
SCRN1-204ENST00000421434 RNF181Q9P0P0 153 aa12.72□□□□□ -0.37
SCRN1-204ENST00000421434 ZNF831Q5JPB2 1677 aa12.72□□□□□ -0.37
SCRN1-204ENST00000421434 KIAA1551Q9HCM1 1747 aa12.71□□□□□ -0.37
SCRN1-204ENST00000421434 SOS1Q07889 1333 aaPredicted RBP12.71□□□□□ -0.37
SCRN1-204ENST00000421434 DIAPH1O60610 1272 aaKnown RBP12.71□□□□□ -0.37
SCRN1-204ENST00000421434 NFIXQ14938 502 aa12.71□□□□□ -0.37
SCRN1-204ENST00000421434 RRAGCQ9HB90 399 aa12.71□□□□□ -0.37
SCRN1-204ENST00000421434 ZBTB1Q9Y2K1 713 aa12.71□□□□□ -0.37
SCRN1-204ENST00000421434 KIF7Q2M1P5 1343 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms