RNA–Protein interactions for RNA: ENST00000421431.1

UBL4A-204, Transcript of ubiquitin like 4A, humanhuman

TSL 5

Gene UBL4A, Length 1,652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4A-204ENST00000421431 VAMP4O75379 141 aa20.59■□□□□ 0.89
UBL4A-204ENST00000421431 VPS72Q15906 364 aa20.59■□□□□ 0.89
UBL4A-204ENST00000421431 KRT24Q2M2I5 525 aa20.59■□□□□ 0.89
UBL4A-204ENST00000421431 SEPT12Q8IYM1 358 aa20.59■□□□□ 0.89
UBL4A-204ENST00000421431 BABAM1Q9NWV8 329 aa20.59■□□□□ 0.89
UBL4A-204ENST00000421431 PLIN1O60240 522 aa20.58■□□□□ 0.89
UBL4A-204ENST00000421431 THRAP3Q9Y2W1 955 aaKnown RBP20.58■□□□□ 0.89
UBL4A-204ENST00000421431 CCDC9Q9Y3X0 531 aaKnown RBP20.58■□□□□ 0.89
UBL4A-204ENST00000421431 MRC1P22897 1456 aa20.58■□□□□ 0.88
UBL4A-204ENST00000421431 DCAF5Q96JK2 942 aa20.58■□□□□ 0.88
UBL4A-204ENST00000421431 SCN11AQ9UI33 1791 aa20.58■□□□□ 0.88
UBL4A-204ENST00000421431 VIRMAQ69YN4 1812 aaKnown RBP20.57■□□□□ 0.88
UBL4A-204ENST00000421431 TEFQ10587 303 aa20.57■□□□□ 0.88
UBL4A-204ENST00000421431 ELL2O00472 640 aaPredicted RBP20.56■□□□□ 0.88
UBL4A-204ENST00000421431 HSP90AB1P08238 724 aaKnown RBP20.56■□□□□ 0.88
UBL4A-204ENST00000421431 NKX1-1Q15270 411 aaPredicted RBP20.56■□□□□ 0.88
UBL4A-204ENST00000421431 TWISTNBQ3B726 338 aaPredicted RBP20.56■□□□□ 0.88
UBL4A-204ENST00000421431 BCL2L13Q9BXK5 485 aa20.56■□□□□ 0.88
UBL4A-204ENST00000421431 SIPA1L3O60292 1781 aaPredicted RBP20.56■□□□□ 0.88
UBL4A-204ENST00000421431 KDM3BQ7LBC6 1761 aa20.55■□□□□ 0.88
UBL4A-204ENST00000421431 BARGINQ6ZT62 677 aa20.54■□□□□ 0.88
UBL4A-204ENST00000421431 DEFB132Q7Z7B7 95 aa20.54■□□□□ 0.88
UBL4A-204ENST00000421431 DDX54Q8TDD1 881 aaKnown RBP20.54■□□□□ 0.88
UBL4A-204ENST00000421431 SSH1Q8WYL5 1049 aa20.54■□□□□ 0.88
UBL4A-204ENST00000421431 SLC52A2Q9HAB3 445 aa20.54■□□□□ 0.88
UBL4A-204ENST00000421431 TNS2Q63HR2 1409 aa20.54■□□□□ 0.88
UBL4A-204ENST00000421431 BTBD11A6QL63 1104 aa20.53■□□□□ 0.88
UBL4A-204ENST00000421431 KCNQ3O43525 872 aa20.53■□□□□ 0.88
UBL4A-204ENST00000421431 ZNF428Q96B54 188 aa20.53■□□□□ 0.88
UBL4A-204ENST00000421431 CDCA7Q9BWT1 371 aaPredicted RBP20.53■□□□□ 0.88
UBL4A-204ENST00000421431 ONECUT3O60422 494 aaPredicted RBP20.51■□□□□ 0.87
UBL4A-204ENST00000421431 FAM98CQ17RN3 349 aaKnown RBP20.51■□□□□ 0.87
UBL4A-204ENST00000421431 ALDH1L2Q3SY69 923 aa20.51■□□□□ 0.87
UBL4A-204ENST00000421431 C20orf194Q5TEA3 1177 aa20.51■□□□□ 0.87
UBL4A-204ENST00000421431 CCDC125Q86Z20 511 aa20.51■□□□□ 0.87
UBL4A-204ENST00000421431 NFATC2IPQ8NCF5 419 aa20.51■□□□□ 0.87
UBL4A-204ENST00000421431 SMC4Q9NTJ3 1288 aa20.51■□□□□ 0.87
UBL4A-204ENST00000421431 EXOC5O00471 708 aa20.5■□□□□ 0.87
UBL4A-204ENST00000421431 EIF4A1P60842 406 aaKnown RBP20.5■□□□□ 0.87
UBL4A-204ENST00000421431 TOGARAM1Q9Y4F4 1720 aa20.5■□□□□ 0.87
UBL4A-204ENST00000421431 A0A0G2JS52 829 aa20.49■□□□□ 0.87
UBL4A-204ENST00000421431 MYT1Q01538 1121 aa20.49■□□□□ 0.87
UBL4A-204ENST00000421431 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.49■□□□□ 0.87
UBL4A-204ENST00000421431 BRPF1P55201 1214 aaPredicted RBP20.48■□□□□ 0.87
UBL4A-204ENST00000421431 FAM182BQ5T319 152 aa20.48■□□□□ 0.87
UBL4A-204ENST00000421431 KRT27Q7Z3Y8 459 aa20.48■□□□□ 0.87
UBL4A-204ENST00000421431 ERVV-2B6SEH9 535 aa20.48■□□□□ 0.87
UBL4A-204ENST00000421431 THSD7AQ9UPZ6 1657 aa20.47■□□□□ 0.87
UBL4A-204ENST00000421431 HEG1Q9ULI3 1381 aa20.47■□□□□ 0.87
UBL4A-204ENST00000421431 TCERG1O14776 1098 aaKnown RBP20.47■□□□□ 0.87
UBL4A-204ENST00000421431 CABP4P57796 275 aa20.47■□□□□ 0.87
UBL4A-204ENST00000421431 DDB1Q16531 1140 aa20.47■□□□□ 0.87
UBL4A-204ENST00000421431 MRPL50Q8N5N7 158 aaKnown RBP20.47■□□□□ 0.87
UBL4A-204ENST00000421431 FRAT1Q92837 279 aaPredicted RBP20.47■□□□□ 0.87
UBL4A-204ENST00000421431 SLC39A6Q13433 755 aa20.46■□□□□ 0.87
UBL4A-204ENST00000421431 TNNQ9UQP3 1299 aa20.46■□□□□ 0.87
UBL4A-204ENST00000421431 ERICH6BQ5W0A0 696 aa20.45■□□□□ 0.86
UBL4A-204ENST00000421431 ZNF790Q6PG37 636 aa20.45■□□□□ 0.86
UBL4A-204ENST00000421431 SOS1Q07889 1333 aaPredicted RBP20.45■□□□□ 0.86
UBL4A-204ENST00000421431 NOB1Q9ULX3 412 aaKnown RBP20.44■□□□□ 0.86
UBL4A-204ENST00000421431 KIF16BQ96L93 1317 aa20.44■□□□□ 0.86
UBL4A-204ENST00000421431 MARCH10Q8NA82 808 aaPredicted RBP20.43■□□□□ 0.86
UBL4A-204ENST00000421431 EXOC6Q8TAG9 804 aa20.43■□□□□ 0.86
UBL4A-204ENST00000421431 CRBNQ96SW2 442 aa20.43■□□□□ 0.86
UBL4A-204ENST00000421431 CANXP27824 592 aaKnown RBP20.42■□□□□ 0.86
UBL4A-204ENST00000421431 PDE3AQ14432 1141 aa20.42■□□□□ 0.86
UBL4A-204ENST00000421431 ZKSCAN2Q63HK3 967 aa20.42■□□□□ 0.86
UBL4A-204ENST00000421431 HOXB7P09629 217 aa20.42■□□□□ 0.86
UBL4A-204ENST00000421431 PAPPAQ13219 1627 aa20.41■□□□□ 0.86
UBL4A-204ENST00000421431 TNS1Q9HBL0 1735 aaKnown RBP20.41■□□□□ 0.86
UBL4A-204ENST00000421431 GIGYF1O75420 1035 aaPredicted RBP20.41■□□□□ 0.86
UBL4A-204ENST00000421431 RLBP1P12271 317 aa20.41■□□□□ 0.86
UBL4A-204ENST00000421431 TRIM27P14373 513 aa20.41■□□□□ 0.86
UBL4A-204ENST00000421431 ATF7IPQ6VMQ6 1270 aa20.4■□□□□ 0.86
UBL4A-204ENST00000421431 PANK1Q8TE04 598 aa20.4■□□□□ 0.86
UBL4A-204ENST00000421431 ZNF496Q96IT1 587 aaPredicted RBP20.4■□□□□ 0.86
UBL4A-204ENST00000421431 PRAMEF22A3QJZ6 481 aa20.39■□□□□ 0.86
UBL4A-204ENST00000421431 SF3B2Q13435 895 aaKnown RBP20.39■□□□□ 0.86
UBL4A-204ENST00000421431 PIGBQ92521 554 aa20.38■□□□□ 0.85
UBL4A-204ENST00000421431 NECTIN2Q92692 538 aa20.38■□□□□ 0.85
UBL4A-204ENST00000421431 CLUAP1Q96AJ1 413 aa20.38■□□□□ 0.85
UBL4A-204ENST00000421431 TMOD3Q9NYL9 352 aa20.38■□□□□ 0.85
UBL4A-204ENST00000421431 DOT1LQ8TEK3 1739 aa20.38■□□□□ 0.85
UBL4A-204ENST00000421431 KCPQ6ZWJ8 1503 aa20.38■□□□□ 0.85
UBL4A-204ENST00000421431 BCL9O00512 1426 aa20.38■□□□□ 0.85
UBL4A-204ENST00000421431 HDGFL1Q5TGJ6 251 aa20.38■□□□□ 0.85
UBL4A-204ENST00000421431 CCDC30Q5VVM6 783 aa20.38■□□□□ 0.85
UBL4A-204ENST00000421431 TTC5Q8N0Z6 440 aa20.38■□□□□ 0.85
UBL4A-204ENST00000421431 SLC4A2P04920 1241 aa20.37■□□□□ 0.85
UBL4A-204ENST00000421431 ARHGAP45Q92619 1136 aa20.37■□□□□ 0.85
UBL4A-204ENST00000421431 UBR2Q8IWV8 1755 aa20.37■□□□□ 0.85
UBL4A-204ENST00000421431 IPO8O15397 1037 aaKnown RBP20.36■□□□□ 0.85
UBL4A-204ENST00000421431 DZIP1LQ8IYY4 767 aaKnown RBP20.36■□□□□ 0.85
UBL4A-204ENST00000421431 C5P01031 1676 aa20.36■□□□□ 0.85
UBL4A-204ENST00000421431 EIF2S2P20042 333 aaKnown RBP20.35■□□□□ 0.85
UBL4A-204ENST00000421431 G2E3Q7L622 706 aa20.35■□□□□ 0.85
UBL4A-204ENST00000421431 FMNL2Q96PY5 1086 aa20.35■□□□□ 0.85
UBL4A-204ENST00000421431 ITGB4P16144 1822 aa20.35■□□□□ 0.85
UBL4A-204ENST00000421431 PSDA5PKW4 1024 aaPredicted RBP20.35■□□□□ 0.85
UBL4A-204ENST00000421431 STK31Q9BXU1 1019 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms