RNA–Protein interactions for RNA: ENST00000420567.7

VAT1-202, Transcript of vesicle amine transport 1, humanhuman

TSL 2 BASIC

Gene VAT1, Length 1,069 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-202ENST00000420567 ADAMTS7Q9UKP4 1686 aa21.1■□□□□ 0.97
VAT1-202ENST00000420567 RBM42Q9BTD8 480 aaKnown RBP21.1■□□□□ 0.97
VAT1-202ENST00000420567 TFCP2L1Q9NZI6 479 aa21.1■□□□□ 0.97
VAT1-202ENST00000420567 CASZ1Q86V15 1759 aa21.1■□□□□ 0.97
VAT1-202ENST00000420567 C5P01031 1676 aa21.09■□□□□ 0.97
VAT1-202ENST00000420567 LRP5O75197 1615 aa21.09■□□□□ 0.97
VAT1-202ENST00000420567 ZBTB7AO95365 584 aa21.09■□□□□ 0.97
VAT1-202ENST00000420567 ATP6V1AP38606 617 aa21.09■□□□□ 0.97
VAT1-202ENST00000420567 ITPK1Q13572 414 aa21.09■□□□□ 0.97
VAT1-202ENST00000420567 IL17REQ8NFR9 667 aa21.09■□□□□ 0.97
VAT1-202ENST00000420567 PNPLA7Q6ZV29 1317 aa21.08■□□□□ 0.97
VAT1-202ENST00000420567 LINC00116Q8NCU8 138 aa21.08■□□□□ 0.97
VAT1-202ENST00000420567 PLEKHF1Q96S99 279 aa21.08■□□□□ 0.97
VAT1-202ENST00000420567 PTCD1O75127 700 aaKnown RBP21.07■□□□□ 0.96
VAT1-202ENST00000420567 NEFMP07197 916 aa21.07■□□□□ 0.96
VAT1-202ENST00000420567 SLC4A9Q96Q91 983 aa21.07■□□□□ 0.96
VAT1-202ENST00000420567 MAPK8IP3Q9UPT6 1336 aa21.05■□□□□ 0.96
VAT1-202ENST00000420567 C4BP0C0L5 1744 aa21.05■□□□□ 0.96
VAT1-202ENST00000420567 TEFQ10587 303 aa21.05■□□□□ 0.96
VAT1-202ENST00000420567 SLC39A6Q13433 755 aa21.05■□□□□ 0.96
VAT1-202ENST00000420567 AK7Q96M32 723 aa21.05■□□□□ 0.96
VAT1-202ENST00000420567 SPON1Q9HCB6 807 aa21.05■□□□□ 0.96
VAT1-202ENST00000420567 WDR43Q15061 677 aaKnown RBP eCLIP21.04■□□□□ 0.96
VAT1-202ENST00000420567 MCM10Q7L590 875 aa21.04■□□□□ 0.96
VAT1-202ENST00000420567 RTF1Q92541 710 aaKnown RBP21.04■□□□□ 0.96
VAT1-202ENST00000420567 CEMIPQ8WUJ3 1361 aa21.04■□□□□ 0.96
VAT1-202ENST00000420567 DCTN1Q14203 1278 aa21.03■□□□□ 0.96
VAT1-202ENST00000420567 PNNQ9H307 717 aaKnown RBP21.03■□□□□ 0.96
VAT1-202ENST00000420567 ATF5Q9Y2D1 282 aaPredicted RBP21.03■□□□□ 0.96
VAT1-202ENST00000420567 TUBGCP6Q96RT7 1819 aa21.02■□□□□ 0.96
VAT1-202ENST00000420567 MSH5O43196 834 aa21.02■□□□□ 0.96
VAT1-202ENST00000420567 SMIM5Q71RC9 77 aa21.02■□□□□ 0.96
VAT1-202ENST00000420567 AMIGO3Q86WK7 504 aa21.02■□□□□ 0.96
VAT1-202ENST00000420567 TAF1LQ8IZX4 1826 aa21.01■□□□□ 0.95
VAT1-202ENST00000420567 KCPQ6ZWJ8 1503 aa21.01■□□□□ 0.95
VAT1-202ENST00000420567 ANP32CO43423 234 aa21.01■□□□□ 0.95
VAT1-202ENST00000420567 PHF14O94880 888 aa21.01■□□□□ 0.95
VAT1-202ENST00000420567 HMGB2P26583 209 aaKnown RBP21.01■□□□□ 0.95
VAT1-202ENST00000420567 NFE2L2Q16236 605 aa21.01■□□□□ 0.95
VAT1-202ENST00000420567 COL23A1Q86Y22 540 aaPredicted RBP21.01■□□□□ 0.95
VAT1-202ENST00000420567 CCDC146Q8IYE0 955 aa21.01■□□□□ 0.95
VAT1-202ENST00000420567 MTFR1LQ9H019 292 aa21.01■□□□□ 0.95
VAT1-202ENST00000420567 GNPATO15228 680 aa21■□□□□ 0.95
VAT1-202ENST00000420567 QSER1Q2KHR3 1735 aa20.99■□□□□ 0.95
VAT1-202ENST00000420567 CCDC184Q52MB2 194 aa20.99■□□□□ 0.95
VAT1-202ENST00000420567 TTC5Q8N0Z6 440 aa20.99■□□□□ 0.95
VAT1-202ENST00000420567 HTATSF1O43719 755 aaKnown RBP20.98■□□□□ 0.95
VAT1-202ENST00000420567 ADAMTS8Q9UP79 889 aa20.98■□□□□ 0.95
VAT1-202ENST00000420567 VIRMAQ69YN4 1812 aaKnown RBP20.98■□□□□ 0.95
VAT1-202ENST00000420567 ZNF831Q5JPB2 1677 aa20.98■□□□□ 0.95
VAT1-202ENST00000420567 TJP1Q07157 1748 aa20.98■□□□□ 0.95
VAT1-202ENST00000420567 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.97■□□□□ 0.95
VAT1-202ENST00000420567 BTBD11A6QL63 1104 aa20.97■□□□□ 0.95
VAT1-202ENST00000420567 PTGER2P43116 358 aa20.97■□□□□ 0.95
VAT1-202ENST00000420567 DNAJC10Q8IXB1 793 aa20.97■□□□□ 0.95
VAT1-202ENST00000420567 PPP1R1BQ9UD71 204 aaPredicted RBP20.97■□□□□ 0.95
VAT1-202ENST00000420567 ZNF790Q6PG37 636 aa20.96■□□□□ 0.95
VAT1-202ENST00000420567 THUMPD2Q9BTF0 503 aaKnown RBP20.96■□□□□ 0.95
VAT1-202ENST00000420567 CNTNAP4Q9C0A0 1308 aa20.96■□□□□ 0.95
VAT1-202ENST00000420567 SIPA1L3O60292 1781 aaPredicted RBP20.95■□□□□ 0.94
VAT1-202ENST00000420567 KCNQ3O43525 872 aa20.95■□□□□ 0.94
VAT1-202ENST00000420567 FLAD1Q8NFF5 587 aa20.95■□□□□ 0.94
VAT1-202ENST00000420567 SLC16A10Q8TF71 515 aa20.95■□□□□ 0.94
VAT1-202ENST00000420567 RRP7AQ9Y3A4 280 aaKnown RBP20.95■□□□□ 0.94
VAT1-202ENST00000420567 COL5A3P25940 1745 aaPredicted RBP20.95■□□□□ 0.94
VAT1-202ENST00000420567 CICQ96RK0 1608 aaPredicted RBP20.94■□□□□ 0.94
VAT1-202ENST00000420567 SSFA2P28290 1259 aa20.94■□□□□ 0.94
VAT1-202ENST00000420567 CRKLP46109 303 aaKnown RBP20.94■□□□□ 0.94
VAT1-202ENST00000420567 MSL1Q68DK7 614 aa20.94■□□□□ 0.94
VAT1-202ENST00000420567 RUNDC1Q96C34 613 aa20.94■□□□□ 0.94
VAT1-202ENST00000420567 ZNF496Q96IT1 587 aaPredicted RBP20.94■□□□□ 0.94
VAT1-202ENST00000420567 RIPK4P57078 832 aa20.93■□□□□ 0.94
VAT1-202ENST00000420567 SGIP1Q9BQI5 828 aa20.93■□□□□ 0.94
VAT1-202ENST00000420567 RTCBQ9Y3I0 505 aaKnown RBP20.93■□□□□ 0.94
VAT1-202ENST00000420567 UBR2Q8IWV8 1755 aa20.92■□□□□ 0.94
VAT1-202ENST00000420567 UBR3Q6ZT12 1888 aa20.92■□□□□ 0.94
VAT1-202ENST00000420567 TMPOP42166 694 aaKnown RBP20.92■□□□□ 0.94
VAT1-202ENST00000420567 RC3H1Q5TC82 1133 aaKnown RBP20.92■□□□□ 0.94
VAT1-202ENST00000420567 NEUROD2Q15784 382 aa20.91■□□□□ 0.94
VAT1-202ENST00000420567 VSIG10Q8N0Z9 540 aa20.91■□□□□ 0.94
VAT1-202ENST00000420567 MRS2Q9HD23 443 aa20.91■□□□□ 0.94
VAT1-202ENST00000420567 MIS18AQ9NYP9 233 aa20.91■□□□□ 0.94
VAT1-202ENST00000420567 HEG1Q9ULI3 1381 aa20.91■□□□□ 0.94
VAT1-202ENST00000420567 RPS6KA4O75676 772 aa20.9■□□□□ 0.94
VAT1-202ENST00000420567 CYP19A1P11511 503 aaPredicted RBP20.9■□□□□ 0.94
VAT1-202ENST00000420567 INTS5Q6P9B9 1019 aaKnown RBP20.9■□□□□ 0.94
VAT1-202ENST00000420567 FMNL2Q96PY5 1086 aa20.9■□□□□ 0.94
VAT1-202ENST00000420567 DLG5Q8TDM6 1919 aa20.89■□□□□ 0.93
VAT1-202ENST00000420567 POLD1P28340 1107 aa20.89■□□□□ 0.93
VAT1-202ENST00000420567 TAF7Q15545 349 aaPredicted RBP20.89■□□□□ 0.93
VAT1-202ENST00000420567 TRAPPC3LQ5T215 181 aa20.89■□□□□ 0.93
VAT1-202ENST00000420567 CCDC87Q9NVE4 849 aa20.89■□□□□ 0.93
VAT1-202ENST00000420567 ARXQ96QS3 562 aa20.88■□□□□ 0.93
VAT1-202ENST00000420567 SRCAPQ6ZRS2 3230 aa20.87■□□□□ 0.93
VAT1-202ENST00000420567 LMOD3Q0VAK6 560 aa20.87■□□□□ 0.93
VAT1-202ENST00000420567 ARHGEF1Q92888 912 aaKnown RBP20.87■□□□□ 0.93
VAT1-202ENST00000420567 ZBTB1Q9Y2K1 713 aa20.87■□□□□ 0.93
VAT1-202ENST00000420567 ADRA2BP18089 450 aa20.86■□□□□ 0.93
VAT1-202ENST00000420567 PRAMEF22A3QJZ6 481 aa20.85■□□□□ 0.93
VAT1-202ENST00000420567 CANXP27824 592 aaKnown RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms