RNA–Protein interactions for RNA: ENST00000420539.1

PTP4A1P1-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 1, humanhuman

BASIC

Gene PTP4A1P1, Length 515 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P1-201ENST00000420539 DPH6Q7L8W6 267 aa7.79□□□□□ -1.16
PTP4A1P1-201ENST00000420539 CCDC116Q8IYX3 515 aa7.79□□□□□ -1.16
PTP4A1P1-201ENST00000420539 DNAAF2Q9NVR5 837 aaKnown RBP7.79□□□□□ -1.16
PTP4A1P1-201ENST00000420539 ZMIZ1Q9ULJ6 1067 aa7.79□□□□□ -1.16
PTP4A1P1-201ENST00000420539 KIAA1024Q9UPX6 916 aa7.79□□□□□ -1.16
PTP4A1P1-201ENST00000420539 FAM196BA6NMK8 535 aa7.78□□□□□ -1.16
PTP4A1P1-201ENST00000420539 ATP1A2P50993 1020 aa7.78□□□□□ -1.16
PTP4A1P1-201ENST00000420539 DHX9Q08211 1270 aaKnown RBP7.78□□□□□ -1.16
PTP4A1P1-201ENST00000420539 NR5A1Q13285 461 aa7.78□□□□□ -1.16
PTP4A1P1-201ENST00000420539 PTK7Q13308 1070 aa7.78□□□□□ -1.16
PTP4A1P1-201ENST00000420539 PPP1R26Q5T8A7 1209 aaPredicted RBP7.78□□□□□ -1.16
PTP4A1P1-201ENST00000420539 ZNF784Q8NCA9 323 aaPredicted RBP7.78□□□□□ -1.16
PTP4A1P1-201ENST00000420539 MICAL1Q8TDZ2 1067 aa7.78□□□□□ -1.16
PTP4A1P1-201ENST00000420539 J3QL48 77 aa7.77□□□□□ -1.17
PTP4A1P1-201ENST00000420539 RGS20O76081 388 aa7.77□□□□□ -1.17
PTP4A1P1-201ENST00000420539 IRX6P78412 446 aaPredicted RBP7.77□□□□□ -1.17
PTP4A1P1-201ENST00000420539 DPYDQ12882 1025 aa7.77□□□□□ -1.17
PTP4A1P1-201ENST00000420539 NNTQ13423 1086 aa7.77□□□□□ -1.17
PTP4A1P1-201ENST00000420539 TMEM164Q5U3C3 297 aa7.77□□□□□ -1.17
PTP4A1P1-201ENST00000420539 CYP4X1Q8N118 509 aa7.77□□□□□ -1.17
PTP4A1P1-201ENST00000420539 TPCN2Q8NHX9 752 aa7.77□□□□□ -1.17
PTP4A1P1-201ENST00000420539 SNIP1Q8TAD8 396 aaKnown RBP7.77□□□□□ -1.17
PTP4A1P1-201ENST00000420539 RBM19Q9Y4C8 960 aaKnown RBP7.77□□□□□ -1.17
PTP4A1P1-201ENST00000420539 PPME1Q9Y570 386 aa7.77□□□□□ -1.17
PTP4A1P1-201ENST00000420539 RECKO95980 971 aa7.76□□□□□ -1.17
PTP4A1P1-201ENST00000420539 ZNF326Q5BKZ1 582 aaKnown RBP7.76□□□□□ -1.17
PTP4A1P1-201ENST00000420539 CCDC102BQ68D86 513 aa7.76□□□□□ -1.17
PTP4A1P1-201ENST00000420539 ANKMY2Q8IV38 441 aa7.76□□□□□ -1.17
PTP4A1P1-201ENST00000420539 MPNDQ8N594 471 aa7.76□□□□□ -1.17
PTP4A1P1-201ENST00000420539 FAM200AQ8TCP9 573 aa7.76□□□□□ -1.17
PTP4A1P1-201ENST00000420539 SFI1A8K8P3 1242 aa7.75□□□□□ -1.17
PTP4A1P1-201ENST00000420539 GDF9O60383 454 aa7.75□□□□□ -1.17
PTP4A1P1-201ENST00000420539 RAB11FIP3O75154 756 aa7.75□□□□□ -1.17
PTP4A1P1-201ENST00000420539 LGR5O75473 907 aa7.75□□□□□ -1.17
PTP4A1P1-201ENST00000420539 STAU1O95793 577 aaKnown RBP7.75□□□□□ -1.17
PTP4A1P1-201ENST00000420539 MARSP56192 900 aaKnown RBP7.75□□□□□ -1.17
PTP4A1P1-201ENST00000420539 PHLDB3Q6NSJ2 640 aa7.75□□□□□ -1.17
PTP4A1P1-201ENST00000420539 NPAS4Q8IUM7 802 aa7.75□□□□□ -1.17
PTP4A1P1-201ENST00000420539 PCDHGA11Q9Y5H2 935 aa7.75□□□□□ -1.17
PTP4A1P1-201ENST00000420539 ZBTB7BO15156 539 aaPredicted RBP7.74□□□□□ -1.17
PTP4A1P1-201ENST00000420539 ERVK-9P63128 1117 aa7.74□□□□□ -1.17
PTP4A1P1-201ENST00000420539 ELOAQ14241 798 aaKnown RBP7.74□□□□□ -1.17
PTP4A1P1-201ENST00000420539 LARGE2Q8N3Y3 721 aa7.74□□□□□ -1.17
PTP4A1P1-201ENST00000420539 OSBPL3Q9H4L5 887 aa7.74□□□□□ -1.17
PTP4A1P1-201ENST00000420539 PGPEP1Q9NXJ5 209 aa7.74□□□□□ -1.17
PTP4A1P1-201ENST00000420539 SUGT1Q9Y2Z0 365 aa7.74□□□□□ -1.17
PTP4A1P1-201ENST00000420539 ANKRD33BA6NCL7 494 aa7.73□□□□□ -1.17
PTP4A1P1-201ENST00000420539 SOWAHDA6NJG2 315 aa7.73□□□□□ -1.17
PTP4A1P1-201ENST00000420539 MYH16Q9H6N6 1097 aa7.73□□□□□ -1.17
PTP4A1P1-201ENST00000420539 EMILIN1Q9Y6C2 1016 aa7.73□□□□□ -1.17
PTP4A1P1-201ENST00000420539 LILRA1O75019 489 aa7.72□□□□□ -1.17
PTP4A1P1-201ENST00000420539 ZIC2O95409 532 aaPredicted RBP7.72□□□□□ -1.17
PTP4A1P1-201ENST00000420539 ARID4AP29374 1257 aaPredicted RBP7.72□□□□□ -1.17
PTP4A1P1-201ENST00000420539 ADD1P35611 737 aaKnown RBP7.72□□□□□ -1.17
PTP4A1P1-201ENST00000420539 WDR4P57081 412 aaKnown RBP7.72□□□□□ -1.17
PTP4A1P1-201ENST00000420539 CBLBQ13191 982 aa7.72□□□□□ -1.17
PTP4A1P1-201ENST00000420539 TRIM67Q6ZTA4 783 aa7.72□□□□□ -1.17
PTP4A1P1-201ENST00000420539 NOP9Q86U38 636 aaKnown RBP7.72□□□□□ -1.17
PTP4A1P1-201ENST00000420539 EXOC8Q8IYI6 725 aa7.72□□□□□ -1.17
PTP4A1P1-201ENST00000420539 SIX5Q8N196 739 aa7.72□□□□□ -1.17
PTP4A1P1-201ENST00000420539 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.72□□□□□ -1.17
PTP4A1P1-201ENST00000420539 ITPKCQ96DU7 683 aa7.72□□□□□ -1.17
PTP4A1P1-201ENST00000420539 ZFAND3Q9H8U3 227 aa7.72□□□□□ -1.17
PTP4A1P1-201ENST00000420539 RAB6BQ9NRW1 208 aa7.72□□□□□ -1.17
PTP4A1P1-201ENST00000420539 TPD52L2O43399 206 aaKnown RBP7.71□□□□□ -1.18
PTP4A1P1-201ENST00000420539 ERCC5P28715 1186 aaPredicted RBP7.71□□□□□ -1.18
PTP4A1P1-201ENST00000420539 SEC13P55735 322 aa7.71□□□□□ -1.18
PTP4A1P1-201ENST00000420539 HINFPQ9BQA5 517 aa7.71□□□□□ -1.18
PTP4A1P1-201ENST00000420539 SLC52A1Q9NWF4 448 aa7.71□□□□□ -1.18
PTP4A1P1-201ENST00000420539 TOR4AQ9NXH8 423 aa7.71□□□□□ -1.18
PTP4A1P1-201ENST00000420539 SERTAD1Q9UHV2 236 aa7.71□□□□□ -1.18
PTP4A1P1-201ENST00000420539 NEFLP07196 543 aa7.7□□□□□ -1.18
PTP4A1P1-201ENST00000420539 SMPD1P17405 629 aa7.7□□□□□ -1.18
PTP4A1P1-201ENST00000420539 CYP2U1Q7Z449 544 aa7.7□□□□□ -1.18
PTP4A1P1-201ENST00000420539 TRIM52Q96A61 297 aa7.7□□□□□ -1.18
PTP4A1P1-201ENST00000420539 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.7□□□□□ -1.18
PTP4A1P1-201ENST00000420539 TMA7Q9Y2S6 64 aaKnown RBP7.7□□□□□ -1.18
PTP4A1P1-201ENST00000420539 SBNO2Q9Y2G9 1366 aa7.7□□□□□ -1.18
PTP4A1P1-201ENST00000420539 PRMT3O60678 531 aa7.69□□□□□ -1.18
PTP4A1P1-201ENST00000420539 DKK1O94907 266 aa7.69□□□□□ -1.18
PTP4A1P1-201ENST00000420539 GDF10P55107 478 aa7.69□□□□□ -1.18
PTP4A1P1-201ENST00000420539 TAGLNQ01995 201 aaKnown RBP7.69□□□□□ -1.18
PTP4A1P1-201ENST00000420539 TSEN2Q8NCE0 465 aaKnown RBP7.69□□□□□ -1.18
PTP4A1P1-201ENST00000420539 HPS1Q92902 700 aa7.69□□□□□ -1.18
PTP4A1P1-201ENST00000420539 AGBL1Q96MI9 1066 aa7.69□□□□□ -1.18
PTP4A1P1-201ENST00000420539 LNPKQ9C0E8 428 aa7.69□□□□□ -1.18
PTP4A1P1-201ENST00000420539 ARHGEF10LQ9HCE6 1279 aa7.69□□□□□ -1.18
PTP4A1P1-201ENST00000420539 PDZRN3Q9UPQ7 1066 aa7.69□□□□□ -1.18
PTP4A1P1-201ENST00000420539 RELBQ01201 579 aa7.68□□□□□ -1.18
PTP4A1P1-201ENST00000420539 FAM69CQ0P6D2 419 aa7.68□□□□□ -1.18
PTP4A1P1-201ENST00000420539 TSNAXIP1Q2TAA8 658 aa7.68□□□□□ -1.18
PTP4A1P1-201ENST00000420539 GPATCH3Q96I76 525 aa7.68□□□□□ -1.18
PTP4A1P1-201ENST00000420539 PRIMPOLQ96LW4 560 aa7.68□□□□□ -1.18
PTP4A1P1-201ENST00000420539 DNAJC2Q99543 621 aaKnown RBP7.68□□□□□ -1.18
PTP4A1P1-201ENST00000420539 ETNK1Q9HBU6 452 aa7.68□□□□□ -1.18
PTP4A1P1-201ENST00000420539 ZNF358Q9NW07 568 aa7.68□□□□□ -1.18
PTP4A1P1-201ENST00000420539 TMEM229AB2RXF0 380 aa7.67□□□□□ -1.18
PTP4A1P1-201ENST00000420539 ADH1AP07327 375 aa7.67□□□□□ -1.18
PTP4A1P1-201ENST00000420539 TIMP2P16035 220 aa7.67□□□□□ -1.18
PTP4A1P1-201ENST00000420539 ATP2B4P23634 1241 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms