RNA–Protein interactions for RNA: ENST00000420077.5

SEMA4F-204, Transcript of ssemaphorin 4F, humanhuman

TSL 1 (best)

Gene SEMA4F, Length 2,192 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4F-204ENST00000420077 DDX11L8A8MPP1 907 aa20.75■□□□□ 0.91
SEMA4F-204ENST00000420077 RGPD2P0DJD1 1756 aa20.75■□□□□ 0.91
SEMA4F-204ENST00000420077 ADGRL3Q9HAR2 1447 aa20.75■□□□□ 0.91
SEMA4F-204ENST00000420077 IP6K1Q92551 441 aa20.75■□□□□ 0.91
SEMA4F-204ENST00000420077 USP26Q9BXU7 913 aa20.75■□□□□ 0.91
SEMA4F-204ENST00000420077 OSBPL3Q9H4L5 887 aa20.75■□□□□ 0.91
SEMA4F-204ENST00000420077 KDM3BQ7LBC6 1761 aa20.74■□□□□ 0.91
SEMA4F-204ENST00000420077 GNAI3P08754 354 aa20.74■□□□□ 0.91
SEMA4F-204ENST00000420077 CASC1Q6TDU7 716 aa20.74■□□□□ 0.91
SEMA4F-204ENST00000420077 USHBP1Q8N6Y0 703 aa20.74■□□□□ 0.91
SEMA4F-204ENST00000420077 CEMIPQ8WUJ3 1361 aa20.74■□□□□ 0.91
SEMA4F-204ENST00000420077 RAB3GAP1Q15042 981 aa20.73■□□□□ 0.91
SEMA4F-204ENST00000420077 RABEP1Q15276 862 aa20.73■□□□□ 0.91
SEMA4F-204ENST00000420077 PROSER2Q86WR7 435 aaPredicted RBP20.73■□□□□ 0.91
SEMA4F-204ENST00000420077 NECTIN2Q92692 538 aa20.73■□□□□ 0.91
SEMA4F-204ENST00000420077 LMO7Q8WWI1 1683 aa20.73■□□□□ 0.91
SEMA4F-204ENST00000420077 TRAK2O60296 914 aa20.72■□□□□ 0.91
SEMA4F-204ENST00000420077 HSP90AA1P07900 732 aaKnown RBP20.72■□□□□ 0.91
SEMA4F-204ENST00000420077 TNPO1Q92973 898 aaKnown RBP20.72■□□□□ 0.91
SEMA4F-204ENST00000420077 PLEKHG5O94827 1062 aa20.72■□□□□ 0.91
SEMA4F-204ENST00000420077 L1TD1Q5T7N2 865 aaKnown RBP20.72■□□□□ 0.91
SEMA4F-204ENST00000420077 PDE1AP54750 535 aa20.71■□□□□ 0.91
SEMA4F-204ENST00000420077 ESCO1Q5FWF5 840 aa20.7■□□□□ 0.91
SEMA4F-204ENST00000420077 SALL3Q9BXA9 1300 aa20.7■□□□□ 0.9
SEMA4F-204ENST00000420077 EXOC6BQ9Y2D4 811 aa20.7■□□□□ 0.9
SEMA4F-204ENST00000420077 ATP8B2P98198 1209 aa20.69■□□□□ 0.9
SEMA4F-204ENST00000420077 PSME1Q06323 249 aa20.69■□□□□ 0.9
SEMA4F-204ENST00000420077 HDGFL1Q5TGJ6 251 aa20.69■□□□□ 0.9
SEMA4F-204ENST00000420077 NBPF6Q5VWK0 638 aa20.69■□□□□ 0.9
SEMA4F-204ENST00000420077 NBPF4Q96M43 638 aa20.69■□□□□ 0.9
SEMA4F-204ENST00000420077 IBTKQ9P2D0 1353 aaPredicted RBP20.68■□□□□ 0.9
SEMA4F-204ENST00000420077 PNMA6EA0A0J9YXQ4 647 aa20.68■□□□□ 0.9
SEMA4F-204ENST00000420077 REC8O95072 547 aa20.68■□□□□ 0.9
SEMA4F-204ENST00000420077 KCNH5Q8NCM2 988 aa20.68■□□□□ 0.9
SEMA4F-204ENST00000420077 GBP4Q96PP9 640 aa20.68■□□□□ 0.9
SEMA4F-204ENST00000420077 LRRCC1Q9C099 1032 aa20.68■□□□□ 0.9
SEMA4F-204ENST00000420077 RTN4Q9NQC3 1192 aaKnown RBP20.68■□□□□ 0.9
SEMA4F-204ENST00000420077 FOXD4L1Q9NU39 408 aa20.68■□□□□ 0.9
SEMA4F-204ENST00000420077 FSD2A1L4K1 749 aa20.67■□□□□ 0.9
SEMA4F-204ENST00000420077 XPCQ01831 940 aaPredicted RBP20.67■□□□□ 0.9
SEMA4F-204ENST00000420077 ORAI2Q96SN7 254 aa20.67■□□□□ 0.9
SEMA4F-204ENST00000420077 LRRFIP2Q9Y608 721 aaKnown RBP20.66■□□□□ 0.9
SEMA4F-204ENST00000420077 ERC2O15083 957 aa20.66■□□□□ 0.9
SEMA4F-204ENST00000420077 USP44Q9H0E7 712 aa20.66■□□□□ 0.9
SEMA4F-204ENST00000420077 GZF1Q9H116 711 aaPredicted RBP20.66■□□□□ 0.9
SEMA4F-204ENST00000420077 AK9Q5TCS8 1911 aa20.66■□□□□ 0.9
SEMA4F-204ENST00000420077 SLIT3O75094 1523 aa20.65■□□□□ 0.9
SEMA4F-204ENST00000420077 PHAXQ9H814 394 aaKnown RBP20.65■□□□□ 0.9
SEMA4F-204ENST00000420077 GOLGA6L3A6NEY3 463 aa20.64■□□□□ 0.89
SEMA4F-204ENST00000420077 HOXB7P09629 217 aa20.64■□□□□ 0.89
SEMA4F-204ENST00000420077 EIF4A1P60842 406 aaKnown RBP20.64■□□□□ 0.89
SEMA4F-204ENST00000420077 NCAPD2Q15021 1401 aa20.64■□□□□ 0.89
SEMA4F-204ENST00000420077 UBTFL1P0CB47 393 aaPredicted RBP20.63■□□□□ 0.89
SEMA4F-204ENST00000420077 MX1P20591 662 aa20.63■□□□□ 0.89
SEMA4F-204ENST00000420077 LGR6Q9HBX8 967 aa20.63■□□□□ 0.89
SEMA4F-204ENST00000420077 LMTK3Q96Q04 1460 aa20.63■□□□□ 0.89
SEMA4F-204ENST00000420077 CAMTA1Q9Y6Y1 1673 aa20.63■□□□□ 0.89
SEMA4F-204ENST00000420077 PTMSP20962 102 aa20.62■□□□□ 0.89
SEMA4F-204ENST00000420077 TSHZ3Q63HK5 1081 aa20.62■□□□□ 0.89
SEMA4F-204ENST00000420077 TRPM3Q9HCF6 1732 aaPredicted RBP20.62■□□□□ 0.89
SEMA4F-204ENST00000420077 STRCP1A6NGW2 1772 aa20.61■□□□□ 0.89
SEMA4F-204ENST00000420077 AKAP4Q5JQC9 854 aa20.61■□□□□ 0.89
SEMA4F-204ENST00000420077 CLEC17AQ6ZS10 378 aa20.61■□□□□ 0.89
SEMA4F-204ENST00000420077 STAP2Q9UGK3 403 aa20.61■□□□□ 0.89
SEMA4F-204ENST00000420077 ZBTB7CA1YPR0 619 aa20.61■□□□□ 0.89
SEMA4F-204ENST00000420077 ST18O60284 1047 aa20.61■□□□□ 0.89
SEMA4F-204ENST00000420077 SSH3Q8TE77 659 aa20.61■□□□□ 0.89
SEMA4F-204ENST00000420077 LRRC59Q96AG4 307 aaKnown RBP20.61■□□□□ 0.89
SEMA4F-204ENST00000420077 SSFA2P28290 1259 aa20.6■□□□□ 0.89
SEMA4F-204ENST00000420077 CHMP4AQ9BY43 222 aa20.6■□□□□ 0.89
SEMA4F-204ENST00000420077 SRCIN1Q9C0H9 1055 aa20.6■□□□□ 0.89
SEMA4F-204ENST00000420077 TMEM94Q12767 1356 aa20.6■□□□□ 0.89
SEMA4F-204ENST00000420077 EIF2S2P20042 333 aaKnown RBP20.59■□□□□ 0.89
SEMA4F-204ENST00000420077 ZNF530Q6P9A1 599 aaPredicted RBP20.59■□□□□ 0.89
SEMA4F-204ENST00000420077 PXDNQ92626 1479 aa20.59■□□□□ 0.89
SEMA4F-204ENST00000420077 OVOS2A0A0G2JMS6 1433 aa20.59■□□□□ 0.89
SEMA4F-204ENST00000420077 AOX1Q06278 1338 aa20.59■□□□□ 0.89
SEMA4F-204ENST00000420077 XRCC6P12956 609 aaKnown RBP eCLIP20.59■□□□□ 0.89
SEMA4F-204ENST00000420077 PLEKHO1Q53GL0 409 aaPredicted RBP20.59■□□□□ 0.89
SEMA4F-204ENST00000420077 ARHGEF25Q86VW2 580 aa20.59■□□□□ 0.89
SEMA4F-204ENST00000420077 CHPF2Q9P2E5 772 aa20.59■□□□□ 0.89
SEMA4F-204ENST00000420077 GCP02774 474 aa20.58■□□□□ 0.89
SEMA4F-204ENST00000420077 TEFQ10587 303 aa20.58■□□□□ 0.89
SEMA4F-204ENST00000420077 SKOR2Q2VWA4 1001 aaPredicted RBP20.58■□□□□ 0.89
SEMA4F-204ENST00000420077 ESYT1Q9BSJ8 1104 aa20.58■□□□□ 0.89
SEMA4F-204ENST00000420077 SIPA1L3O60292 1781 aaPredicted RBP20.58■□□□□ 0.88
SEMA4F-204ENST00000420077 AMOTQ4VCS5 1084 aa20.58■□□□□ 0.88
SEMA4F-204ENST00000420077 LMOD2Q6P5Q4 547 aa20.58■□□□□ 0.88
SEMA4F-204ENST00000420077 KCNQ3O43525 872 aa20.57■□□□□ 0.88
SEMA4F-204ENST00000420077 POLA2Q14181 598 aa20.57■□□□□ 0.88
SEMA4F-204ENST00000420077 DDX17Q92841 729 aaKnown RBP20.57■□□□□ 0.88
SEMA4F-204ENST00000420077 BTBD11A6QL63 1104 aa20.56■□□□□ 0.88
SEMA4F-204ENST00000420077 C19orf44Q9H6X5 657 aa20.56■□□□□ 0.88
SEMA4F-204ENST00000420077 KIF1AQ12756 1690 aa20.56■□□□□ 0.88
SEMA4F-204ENST00000420077 PPP1R42Q7Z4L9 355 aa20.56■□□□□ 0.88
SEMA4F-204ENST00000420077 DNAAF4Q8WXU2 420 aa20.56■□□□□ 0.88
SEMA4F-204ENST00000420077 ISY1Q9ULR0 285 aaKnown RBP20.56■□□□□ 0.88
SEMA4F-204ENST00000420077 RGPD5Q99666 1765 aa20.55■□□□□ 0.88
SEMA4F-204ENST00000420077 RAB11FIP3O75154 756 aa20.55■□□□□ 0.88
SEMA4F-204ENST00000420077 CHMLP26374 656 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms