RNA–Protein interactions for RNA: ENST00000419225.1

AC008060.3-201, humanhuman

TSL 4 BASIC

Gene AC008060.3, Length 534 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008060.3-201ENST00000419225 ZNF530Q6P9A1 599 aaPredicted RBP12.66□□□□□ -0.38
AC008060.3-201ENST00000419225 MPRIPQ6WCQ1 1025 aa12.66□□□□□ -0.38
AC008060.3-201ENST00000419225 FLAD1Q8NFF5 587 aa12.66□□□□□ -0.38
AC008060.3-201ENST00000419225 TJP1Q07157 1748 aa12.65□□□□□ -0.38
AC008060.3-201ENST00000419225 MYCNP04198 464 aaPredicted RBP12.65□□□□□ -0.38
AC008060.3-201ENST00000419225 PIGBQ92521 554 aa12.65□□□□□ -0.38
AC008060.3-201ENST00000419225 CFAP53Q96M91 514 aa12.65□□□□□ -0.38
AC008060.3-201ENST00000419225 PPP1R1BQ9UD71 204 aaPredicted RBP12.65□□□□□ -0.38
AC008060.3-201ENST00000419225 AEBP1Q8IUX7 1158 aa12.64□□□□□ -0.39
AC008060.3-201ENST00000419225 SGIP1Q9BQI5 828 aa12.64□□□□□ -0.39
AC008060.3-201ENST00000419225 PNPLA7Q6ZV29 1317 aa12.63□□□□□ -0.39
AC008060.3-201ENST00000419225 C4AP0C0L4 1744 aa12.63□□□□□ -0.39
AC008060.3-201ENST00000419225 CHD4Q14839 1912 aa12.63□□□□□ -0.39
AC008060.3-201ENST00000419225 PTGER2P43116 358 aa12.63□□□□□ -0.39
AC008060.3-201ENST00000419225 AKAP4Q5JQC9 854 aa12.63□□□□□ -0.39
AC008060.3-201ENST00000419225 TFCP2L1Q9NZI6 479 aa12.63□□□□□ -0.39
AC008060.3-201ENST00000419225 LOC102724428A0A0B4J2F2 783 aa12.62□□□□□ -0.39
AC008060.3-201ENST00000419225 ZBTB7AO95365 584 aa12.62□□□□□ -0.39
AC008060.3-201ENST00000419225 SIK1P57059 783 aa12.62□□□□□ -0.39
AC008060.3-201ENST00000419225 U3KPZ7 1027 aaPredicted RBP12.62□□□□□ -0.39
AC008060.3-201ENST00000419225 MYH14Q7Z406 1995 aaKnown RBP12.61□□□□□ -0.39
AC008060.3-201ENST00000419225 DLG5Q8TDM6 1919 aa12.61□□□□□ -0.39
AC008060.3-201ENST00000419225 PDGFDQ9GZP0 370 aaPredicted RBP12.61□□□□□ -0.39
AC008060.3-201ENST00000419225 NUDCQ9Y266 331 aa12.61□□□□□ -0.39
AC008060.3-201ENST00000419225 SSFA2P28290 1259 aa12.6□□□□□ -0.39
AC008060.3-201ENST00000419225 CABP4P57796 275 aa12.6□□□□□ -0.39
AC008060.3-201ENST00000419225 ATG3Q9NT62 314 aa12.6□□□□□ -0.39
AC008060.3-201ENST00000419225 KIF13BQ9NQT8 1826 aa12.6□□□□□ -0.39
AC008060.3-201ENST00000419225 POLD1P28340 1107 aa12.59□□□□□ -0.39
AC008060.3-201ENST00000419225 PPP2R1AP30153 589 aa12.59□□□□□ -0.39
AC008060.3-201ENST00000419225 GAS2L2Q8NHY3 880 aa12.59□□□□□ -0.39
AC008060.3-201ENST00000419225 AK7Q96M32 723 aa12.59□□□□□ -0.39
AC008060.3-201ENST00000419225 ASAP1Q9ULH1 1129 aa12.59□□□□□ -0.39
AC008060.3-201ENST00000419225 CNTNAP4Q9C0A0 1308 aa12.59□□□□□ -0.39
AC008060.3-201ENST00000419225 HMOX1P09601 288 aa12.58□□□□□ -0.4
AC008060.3-201ENST00000419225 RC3H1Q5TC82 1133 aaKnown RBP12.58□□□□□ -0.4
AC008060.3-201ENST00000419225 ARXQ96QS3 562 aa12.58□□□□□ -0.4
AC008060.3-201ENST00000419225 ATF5Q9Y2D1 282 aaPredicted RBP12.58□□□□□ -0.4
AC008060.3-201ENST00000419225 ATP6V1AP38606 617 aa12.57□□□□□ -0.4
AC008060.3-201ENST00000419225 KCNQ4P56696 695 aa12.57□□□□□ -0.4
AC008060.3-201ENST00000419225 SLC52A2Q9HAB3 445 aa12.57□□□□□ -0.4
AC008060.3-201ENST00000419225 KCPQ6ZWJ8 1503 aa12.57□□□□□ -0.4
AC008060.3-201ENST00000419225 U2SURPO15042 1029 aaKnown RBP12.56□□□□□ -0.4
AC008060.3-201ENST00000419225 ZEB1P37275 1124 aaPredicted RBP12.56□□□□□ -0.4
AC008060.3-201ENST00000419225 MTHFSDQ2M296 383 aaKnown RBP12.56□□□□□ -0.4
AC008060.3-201ENST00000419225 COL23A1Q86Y22 540 aaPredicted RBP12.56□□□□□ -0.4
AC008060.3-201ENST00000419225 RNMTO43148 476 aaKnown RBP12.55□□□□□ -0.4
AC008060.3-201ENST00000419225 FCHSD2O94868 740 aa12.55□□□□□ -0.4
AC008060.3-201ENST00000419225 ITPK1Q13572 414 aa12.55□□□□□ -0.4
AC008060.3-201ENST00000419225 NFATC2IPQ8NCF5 419 aa12.55□□□□□ -0.4
AC008060.3-201ENST00000419225 LINC00116Q8NCU8 138 aa12.55□□□□□ -0.4
AC008060.3-201ENST00000419225 RSPH6AQ9H0K4 717 aa12.55□□□□□ -0.4
AC008060.3-201ENST00000419225 CEMIPQ8WUJ3 1361 aa12.55□□□□□ -0.4
AC008060.3-201ENST00000419225 GNAT3A8MTJ3 354 aa12.54□□□□□ -0.4
AC008060.3-201ENST00000419225 RALBP1Q15311 655 aa12.54□□□□□ -0.4
AC008060.3-201ENST00000419225 SYT17Q9BSW7 474 aa12.54□□□□□ -0.4
AC008060.3-201ENST00000419225 FHDC1Q9C0D6 1143 aaPredicted RBP12.54□□□□□ -0.4
AC008060.3-201ENST00000419225 LAMB4A4D0S4 1761 aa12.53□□□□□ -0.4
AC008060.3-201ENST00000419225 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.53□□□□□ -0.4
AC008060.3-201ENST00000419225 GNPATO15228 680 aa12.53□□□□□ -0.4
AC008060.3-201ENST00000419225 VSIG10Q8N0Z9 540 aa12.53□□□□□ -0.4
AC008060.3-201ENST00000419225 RTCBQ9Y3I0 505 aaKnown RBP12.53□□□□□ -0.4
AC008060.3-201ENST00000419225 KDM3BQ7LBC6 1761 aa12.53□□□□□ -0.4
AC008060.3-201ENST00000419225 HTATSF1O43719 755 aaKnown RBP12.52□□□□□ -0.41
AC008060.3-201ENST00000419225 PRKAR2BP31323 418 aa12.52□□□□□ -0.41
AC008060.3-201ENST00000419225 SLC4A9Q96Q91 983 aa12.52□□□□□ -0.41
AC008060.3-201ENST00000419225 RBM42Q9BTD8 480 aaKnown RBP12.52□□□□□ -0.41
AC008060.3-201ENST00000419225 PNNQ9H307 717 aaKnown RBP12.52□□□□□ -0.41
AC008060.3-201ENST00000419225 SCN7AQ01118 1682 aa12.51□□□□□ -0.41
AC008060.3-201ENST00000419225 BRCA1P38398 1863 aaKnown RBP12.51□□□□□ -0.41
AC008060.3-201ENST00000419225 RPS6KA4O75676 772 aa12.51□□□□□ -0.41
AC008060.3-201ENST00000419225 U2AF1L5P0DN76 240 aaPredicted RBP12.51□□□□□ -0.41
AC008060.3-201ENST00000419225 U2AF1Q01081 240 aaKnown RBP eCLIP12.51□□□□□ -0.41
AC008060.3-201ENST00000419225 TEFQ10587 303 aa12.51□□□□□ -0.41
AC008060.3-201ENST00000419225 LGR6Q9HBX8 967 aa12.51□□□□□ -0.41
AC008060.3-201ENST00000419225 KIAA1551Q9HCM1 1747 aa12.51□□□□□ -0.41
AC008060.3-201ENST00000419225 NEFMP07197 916 aa12.5□□□□□ -0.41
AC008060.3-201ENST00000419225 CNGB1Q14028 1251 aaPredicted RBP12.5□□□□□ -0.41
AC008060.3-201ENST00000419225 CD2APQ9Y5K6 639 aa12.5□□□□□ -0.41
AC008060.3-201ENST00000419225 BCORQ6W2J9 1755 aa12.49□□□□□ -0.41
AC008060.3-201ENST00000419225 NRXN2Q9P2S2 1712 aa12.49□□□□□ -0.41
AC008060.3-201ENST00000419225 PTCD1O75127 700 aaKnown RBP12.49□□□□□ -0.41
AC008060.3-201ENST00000419225 TRAPPC3LQ5T215 181 aa12.49□□□□□ -0.41
AC008060.3-201ENST00000419225 TTC5Q8N0Z6 440 aa12.49□□□□□ -0.41
AC008060.3-201ENST00000419225 MYBBP1AQ9BQG0 1328 aaKnown RBP12.48□□□□□ -0.41
AC008060.3-201ENST00000419225 PHF14O94880 888 aa12.48□□□□□ -0.41
AC008060.3-201ENST00000419225 CRKLP46109 303 aaKnown RBP12.48□□□□□ -0.41
AC008060.3-201ENST00000419225 AMIGO3Q86WK7 504 aa12.48□□□□□ -0.41
AC008060.3-201ENST00000419225 NLGN1Q8N2Q7 840 aa12.48□□□□□ -0.41
AC008060.3-201ENST00000419225 TEX13AQ9BXU3 409 aaPredicted RBP12.48□□□□□ -0.41
AC008060.3-201ENST00000419225 AFDNP55196 1824 aaKnown RBP12.48□□□□□ -0.41
AC008060.3-201ENST00000419225 ARFGEF1Q9Y6D6 1849 aa12.48□□□□□ -0.41
AC008060.3-201ENST00000419225 HEG1Q9ULI3 1381 aa12.47□□□□□ -0.41
AC008060.3-201ENST00000419225 ZNF790Q6PG37 636 aa12.47□□□□□ -0.41
AC008060.3-201ENST00000419225 IL17REQ8NFR9 667 aa12.47□□□□□ -0.41
AC008060.3-201ENST00000419225 RTF1Q92541 710 aaKnown RBP12.47□□□□□ -0.41
AC008060.3-201ENST00000419225 PHACTR3Q96KR7 559 aa12.47□□□□□ -0.41
AC008060.3-201ENST00000419225 CCDC87Q9NVE4 849 aa12.47□□□□□ -0.41
AC008060.3-201ENST00000419225 DLEC1Q9Y238 1755 aa12.47□□□□□ -0.41
AC008060.3-201ENST00000419225 RFC4P35249 363 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 293.7 ms