RNA–Protein interactions for RNA: ENST00000419074.5

RCC1-206, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 5

Gene RCC1, Length 997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-206ENST00000419074 PIGBQ92521 554 aa17.27■□□□□ 0.36
RCC1-206ENST00000419074 ACSBG1Q96GR2 724 aa17.27■□□□□ 0.36
RCC1-206ENST00000419074 MBIPQ9NS73 344 aa17.27■□□□□ 0.36
RCC1-206ENST00000419074 BCL9O00512 1426 aa17.27■□□□□ 0.35
RCC1-206ENST00000419074 DUSP27Q5VZP5 1158 aa17.26■□□□□ 0.35
RCC1-206ENST00000419074 TSR2Q969E8 191 aaKnown RBP17.26■□□□□ 0.35
RCC1-206ENST00000419074 SYTL4Q96C24 671 aaPredicted RBP17.26■□□□□ 0.35
RCC1-206ENST00000419074 RGS12O14924 1447 aa17.26■□□□□ 0.35
RCC1-206ENST00000419074 LRRC37A3O60309 1634 aa17.25■□□□□ 0.35
RCC1-206ENST00000419074 FANCIQ9NVI1 1328 aa17.24■□□□□ 0.35
RCC1-206ENST00000419074 KCNQ3O43525 872 aa17.23■□□□□ 0.35
RCC1-206ENST00000419074 KCNQ2O43526 872 aa17.23■□□□□ 0.35
RCC1-206ENST00000419074 SLC39A6Q13433 755 aa17.23■□□□□ 0.35
RCC1-206ENST00000419074 ZNF790Q6PG37 636 aa17.23■□□□□ 0.35
RCC1-206ENST00000419074 WNK3Q9BYP7 1800 aa17.22■□□□□ 0.35
RCC1-206ENST00000419074 ILDR2Q71H61 639 aa17.22■□□□□ 0.35
RCC1-206ENST00000419074 TTC5Q8N0Z6 440 aa17.22■□□□□ 0.35
RCC1-206ENST00000419074 ATG3Q9NT62 314 aa17.22■□□□□ 0.35
RCC1-206ENST00000419074 EIF4A1P60842 406 aaKnown RBP17.21■□□□□ 0.35
RCC1-206ENST00000419074 EXOSC9Q06265 439 aaKnown RBP17.21■□□□□ 0.35
RCC1-206ENST00000419074 BCL11BQ9C0K0 894 aaPredicted RBP17.21■□□□□ 0.35
RCC1-206ENST00000419074 MRC1P22897 1456 aa17.2■□□□□ 0.34
RCC1-206ENST00000419074 ASAP1Q9ULH1 1129 aa17.2■□□□□ 0.34
RCC1-206ENST00000419074 SHANK3Q9BYB0 1731 aa17.2■□□□□ 0.34
RCC1-206ENST00000419074 ADAMTS7Q9UKP4 1686 aa17.2■□□□□ 0.34
RCC1-206ENST00000419074 C8orf58Q8NAV2 365 aa17.19■□□□□ 0.34
RCC1-206ENST00000419074 SMARCC1Q92922 1105 aaPredicted RBP17.19■□□□□ 0.34
RCC1-206ENST00000419074 CENPBP07199 599 aaPredicted RBP17.18■□□□□ 0.34
RCC1-206ENST00000419074 PTF1AQ7RTS3 328 aa17.18■□□□□ 0.34
RCC1-206ENST00000419074 FMNL2Q96PY5 1086 aa17.18■□□□□ 0.34
RCC1-206ENST00000419074 ELL2O00472 640 aaPredicted RBP17.17■□□□□ 0.34
RCC1-206ENST00000419074 TRIM37O94972 964 aa17.17■□□□□ 0.34
RCC1-206ENST00000419074 CT47B1P0C2W7 299 aaPredicted RBP17.17■□□□□ 0.34
RCC1-206ENST00000419074 ZNF496Q96IT1 587 aaPredicted RBP17.17■□□□□ 0.34
RCC1-206ENST00000419074 DLG5Q8TDM6 1919 aa17.17■□□□□ 0.34
RCC1-206ENST00000419074 PTCD1O75127 700 aaKnown RBP17.16■□□□□ 0.34
RCC1-206ENST00000419074 VAMP4O75379 141 aa17.16■□□□□ 0.34
RCC1-206ENST00000419074 KRT24Q2M2I5 525 aa17.16■□□□□ 0.34
RCC1-206ENST00000419074 TWISTNBQ3B726 338 aaPredicted RBP17.16■□□□□ 0.34
RCC1-206ENST00000419074 TSPYL6Q8N831 410 aa17.16■□□□□ 0.34
RCC1-206ENST00000419074 SOS1Q07889 1333 aaPredicted RBP17.16■□□□□ 0.34
RCC1-206ENST00000419074 GIGYF1O75420 1035 aaPredicted RBP17.15■□□□□ 0.34
RCC1-206ENST00000419074 HOXB7P09629 217 aa17.15■□□□□ 0.34
RCC1-206ENST00000419074 SNRPA1P09661 255 aaKnown RBP17.15■□□□□ 0.34
RCC1-206ENST00000419074 RBM42Q9BTD8 480 aaKnown RBP17.15■□□□□ 0.34
RCC1-206ENST00000419074 HEG1Q9ULI3 1381 aa17.15■□□□□ 0.34
RCC1-206ENST00000419074 VSIG10Q8N0Z9 540 aa17.14■□□□□ 0.33
RCC1-206ENST00000419074 CHMP4AQ9BY43 222 aa17.14■□□□□ 0.33
RCC1-206ENST00000419074 SCN11AQ9UI33 1791 aa17.13■□□□□ 0.33
RCC1-206ENST00000419074 ZNF428Q96B54 188 aa17.13■□□□□ 0.33
RCC1-206ENST00000419074 TEX13AQ9BXU3 409 aaPredicted RBP17.12■□□□□ 0.33
RCC1-206ENST00000419074 PALLDQ8WX93 1383 aa17.12■□□□□ 0.33
RCC1-206ENST00000419074 LOC102724428A0A0B4J2F2 783 aa17.11■□□□□ 0.33
RCC1-206ENST00000419074 APBA3O96018 575 aa17.11■□□□□ 0.33
RCC1-206ENST00000419074 SIK1P57059 783 aa17.11■□□□□ 0.33
RCC1-206ENST00000419074 TOGARAM1Q9Y4F4 1720 aa17.1■□□□□ 0.33
RCC1-206ENST00000419074 PRAMEF22A3QJZ6 481 aa17.1■□□□□ 0.33
RCC1-206ENST00000419074 SLC4A9Q96Q91 983 aa17.1■□□□□ 0.33
RCC1-206ENST00000419074 RCAN3Q9UKA8 241 aa17.1■□□□□ 0.33
RCC1-206ENST00000419074 USP16Q9Y5T5 823 aa17.1■□□□□ 0.33
RCC1-206ENST00000419074 PLSCR1O15162 318 aa17.09■□□□□ 0.33
RCC1-206ENST00000419074 EIF2S2P20042 333 aaKnown RBP17.09■□□□□ 0.33
RCC1-206ENST00000419074 ATP6V1AP38606 617 aa17.09■□□□□ 0.33
RCC1-206ENST00000419074 RARSP54136 660 aaKnown RBP17.09■□□□□ 0.33
RCC1-206ENST00000419074 HDGFL1Q5TGJ6 251 aa17.09■□□□□ 0.33
RCC1-206ENST00000419074 CCDC30Q5VVM6 783 aa17.09■□□□□ 0.33
RCC1-206ENST00000419074 SOCS7O14512 581 aa17.08■□□□□ 0.32
RCC1-206ENST00000419074 STARD3NLO95772 234 aa17.08■□□□□ 0.32
RCC1-206ENST00000419074 ALDH1L2Q3SY69 923 aa17.08■□□□□ 0.32
RCC1-206ENST00000419074 DNAJC10Q8IXB1 793 aa17.08■□□□□ 0.32
RCC1-206ENST00000419074 BRWD3Q6RI45 1802 aa17.07■□□□□ 0.32
RCC1-206ENST00000419074 CCDC125Q86Z20 511 aa17.07■□□□□ 0.32
RCC1-206ENST00000419074 SSH1Q8WYL5 1049 aa17.07■□□□□ 0.32
RCC1-206ENST00000419074 DOT1LQ8TEK3 1739 aa17.07■□□□□ 0.32
RCC1-206ENST00000419074 KCPQ6ZWJ8 1503 aa17.06■□□□□ 0.32
RCC1-206ENST00000419074 SF3B2Q13435 895 aaKnown RBP17.06■□□□□ 0.32
RCC1-206ENST00000419074 NECTIN2Q92692 538 aa17.06■□□□□ 0.32
RCC1-206ENST00000419074 CCNL1Q9UK58 526 aaPredicted RBP17.06■□□□□ 0.32
RCC1-206ENST00000419074 SIPA1L3O60292 1781 aaPredicted RBP17.05■□□□□ 0.32
RCC1-206ENST00000419074 TCERG1O14776 1098 aaKnown RBP17.05■□□□□ 0.32
RCC1-206ENST00000419074 CYP19A1P11511 503 aaPredicted RBP17.05■□□□□ 0.32
RCC1-206ENST00000419074 HMGB2P26583 209 aaKnown RBP17.05■□□□□ 0.32
RCC1-206ENST00000419074 ITPK1Q13572 414 aa17.05■□□□□ 0.32
RCC1-206ENST00000419074 SLC27A3Q5K4L6 730 aa17.05■□□□□ 0.32
RCC1-206ENST00000419074 STK31Q9BXU1 1019 aa17.05■□□□□ 0.32
RCC1-206ENST00000419074 SLC4A2P04920 1241 aa17.04■□□□□ 0.32
RCC1-206ENST00000419074 MRPL50Q8N5N7 158 aaKnown RBP17.04■□□□□ 0.32
RCC1-206ENST00000419074 SMC4Q9NTJ3 1288 aa17.04■□□□□ 0.32
RCC1-206ENST00000419074 DBF4Q9UBU7 674 aaPredicted RBP17.04■□□□□ 0.32
RCC1-206ENST00000419074 NHSQ6T4R5 1651 aa17.04■□□□□ 0.32
RCC1-206ENST00000419074 ERBB4Q15303 1308 aa17.03■□□□□ 0.32
RCC1-206ENST00000419074 BCAR3O75815 825 aa17.03■□□□□ 0.32
RCC1-206ENST00000419074 BRPF1P55201 1214 aaPredicted RBP17.03■□□□□ 0.32
RCC1-206ENST00000419074 TXNRD1Q16881 649 aa17.03■□□□□ 0.32
RCC1-206ENST00000419074 PROM2Q8N271 834 aa17.03■□□□□ 0.32
RCC1-206ENST00000419074 BCL2L13Q9BXK5 485 aa17.03■□□□□ 0.32
RCC1-206ENST00000419074 DDX21Q9NR30 783 aaKnown RBP eCLIP17.03■□□□□ 0.32
RCC1-206ENST00000419074 KDM3BQ7LBC6 1761 aa17.02■□□□□ 0.32
RCC1-206ENST00000419074 A1BGP04217 495 aa17.02■□□□□ 0.32
RCC1-206ENST00000419074 KCNQ4P56696 695 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 669.3 ms