RNA–Protein interactions for RNA: ENST00000416177.1

ABCB1-202, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 5

Gene ABCB1, Length 461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-202ENST00000416177 TUBGCP6Q96RT7 1819 aa13.92□□□□□ -0.18
ABCB1-202ENST00000416177 AMER1Q5JTC6 1135 aaPredicted RBP13.92□□□□□ -0.18
ABCB1-202ENST00000416177 ARXQ96QS3 562 aa13.92□□□□□ -0.18
ABCB1-202ENST00000416177 TMOD3Q9NYL9 352 aa13.92□□□□□ -0.18
ABCB1-202ENST00000416177 ERVV-2B6SEH9 535 aa13.91□□□□□ -0.18
ABCB1-202ENST00000416177 DCAF5Q96JK2 942 aa13.91□□□□□ -0.18
ABCB1-202ENST00000416177 SYT17Q9BSW7 474 aa13.91□□□□□ -0.18
ABCB1-202ENST00000416177 KDRP35968 1356 aa13.91□□□□□ -0.18
ABCB1-202ENST00000416177 FHDC1Q9C0D6 1143 aaPredicted RBP13.9□□□□□ -0.18
ABCB1-202ENST00000416177 ZNF831Q5JPB2 1677 aa13.9□□□□□ -0.18
ABCB1-202ENST00000416177 C4BP0C0L5 1744 aa13.9□□□□□ -0.18
ABCB1-202ENST00000416177 PER1O15534 1290 aaPredicted RBP13.89□□□□□ -0.19
ABCB1-202ENST00000416177 PIGBQ92521 554 aa13.89□□□□□ -0.19
ABCB1-202ENST00000416177 LOC102724428A0A0B4J2F2 783 aa13.87□□□□□ -0.19
ABCB1-202ENST00000416177 IL13P35225 146 aa13.87□□□□□ -0.19
ABCB1-202ENST00000416177 SIK1P57059 783 aa13.87□□□□□ -0.19
ABCB1-202ENST00000416177 C1orf141Q5JVX7 400 aa13.87□□□□□ -0.19
ABCB1-202ENST00000416177 AK7Q96M32 723 aa13.87□□□□□ -0.19
ABCB1-202ENST00000416177 SSFA2P28290 1259 aa13.86□□□□□ -0.19
ABCB1-202ENST00000416177 KCNQ4P56696 695 aa13.86□□□□□ -0.19
ABCB1-202ENST00000416177 ZNF530Q6P9A1 599 aaPredicted RBP13.86□□□□□ -0.19
ABCB1-202ENST00000416177 UBR3Q6ZT12 1888 aa13.86□□□□□ -0.19
ABCB1-202ENST00000416177 MTHFSP49914 203 aa13.85□□□□□ -0.19
ABCB1-202ENST00000416177 SULT6B1Q6IMI4 303 aa13.85□□□□□ -0.19
ABCB1-202ENST00000416177 COL23A1Q86Y22 540 aaPredicted RBP13.85□□□□□ -0.19
ABCB1-202ENST00000416177 CHD4Q14839 1912 aa13.84□□□□□ -0.19
ABCB1-202ENST00000416177 YY1P25490 414 aa13.84□□□□□ -0.19
ABCB1-202ENST00000416177 ATP6V1AP38606 617 aa13.84□□□□□ -0.19
ABCB1-202ENST00000416177 POTEHQ6S545 545 aa13.84□□□□□ -0.19
ABCB1-202ENST00000416177 DIAPH1O60610 1272 aaKnown RBP13.83□□□□□ -0.2
ABCB1-202ENST00000416177 CABP4P57796 275 aa13.83□□□□□ -0.2
ABCB1-202ENST00000416177 ATG3Q9NT62 314 aa13.83□□□□□ -0.2
ABCB1-202ENST00000416177 SCN11AQ9UI33 1791 aa13.83□□□□□ -0.2
ABCB1-202ENST00000416177 KDM6AO15550 1401 aaPredicted RBP13.82□□□□□ -0.2
ABCB1-202ENST00000416177 AKAP4Q5JQC9 854 aa13.82□□□□□ -0.2
ABCB1-202ENST00000416177 ASAP1Q9ULH1 1129 aa13.82□□□□□ -0.2
ABCB1-202ENST00000416177 CC2D1BQ5T0F9 858 aaKnown RBP13.81□□□□□ -0.2
ABCB1-202ENST00000416177 RC3H1Q5TC82 1133 aaKnown RBP13.81□□□□□ -0.2
ABCB1-202ENST00000416177 AEBP1Q8IUX7 1158 aa13.81□□□□□ -0.2
ABCB1-202ENST00000416177 CD2APQ9Y5K6 639 aa13.81□□□□□ -0.2
ABCB1-202ENST00000416177 CICQ96RK0 1608 aaPredicted RBP13.81□□□□□ -0.2
ABCB1-202ENST00000416177 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.8□□□□□ -0.2
ABCB1-202ENST00000416177 COL5A3P25940 1745 aaPredicted RBP13.8□□□□□ -0.2
ABCB1-202ENST00000416177 CNTNAP4Q9C0A0 1308 aa13.8□□□□□ -0.2
ABCB1-202ENST00000416177 LINC00116Q8NCU8 138 aa13.79□□□□□ -0.2
ABCB1-202ENST00000416177 RTCBQ9Y3I0 505 aaKnown RBP13.79□□□□□ -0.2
ABCB1-202ENST00000416177 GNPATO15228 680 aa13.78□□□□□ -0.2
ABCB1-202ENST00000416177 GRIN3BO60391 1043 aa13.78□□□□□ -0.2
ABCB1-202ENST00000416177 ITPK1Q13572 414 aa13.78□□□□□ -0.2
ABCB1-202ENST00000416177 KLHL34Q8N239 644 aa13.78□□□□□ -0.2
ABCB1-202ENST00000416177 CFAP53Q96M91 514 aa13.78□□□□□ -0.2
ABCB1-202ENST00000416177 VIRMAQ69YN4 1812 aaKnown RBP13.78□□□□□ -0.2
ABCB1-202ENST00000416177 MRC1P22897 1456 aa13.77□□□□□ -0.21
ABCB1-202ENST00000416177 GPR162Q16538 588 aa13.77□□□□□ -0.21
ABCB1-202ENST00000416177 TRAPPC3LQ5T215 181 aa13.77□□□□□ -0.21
ABCB1-202ENST00000416177 ADAMTS7Q9UKP4 1686 aa13.77□□□□□ -0.21
ABCB1-202ENST00000416177 COL3A1P02461 1466 aaPredicted RBP13.76□□□□□ -0.21
ABCB1-202ENST00000416177 PHF14O94880 888 aa13.76□□□□□ -0.21
ABCB1-202ENST00000416177 NLGN1Q8N2Q7 840 aa13.76□□□□□ -0.21
ABCB1-202ENST00000416177 NFATC2IPQ8NCF5 419 aa13.76□□□□□ -0.21
ABCB1-202ENST00000416177 GAS2L2Q8NHY3 880 aa13.76□□□□□ -0.21
ABCB1-202ENST00000416177 SLC52A2Q9HAB3 445 aa13.76□□□□□ -0.21
ABCB1-202ENST00000416177 NUDCQ9Y266 331 aa13.76□□□□□ -0.21
ABCB1-202ENST00000416177 RPS6KA4O75676 772 aa13.75□□□□□ -0.21
ABCB1-202ENST00000416177 HMOX1P09601 288 aa13.75□□□□□ -0.21
ABCB1-202ENST00000416177 RNMTO43148 476 aaKnown RBP13.74□□□□□ -0.21
ABCB1-202ENST00000416177 MSL1Q68DK7 614 aa13.74□□□□□ -0.21
ABCB1-202ENST00000416177 VSIG10Q8N0Z9 540 aa13.73□□□□□ -0.21
ABCB1-202ENST00000416177 SLC4A9Q96Q91 983 aa13.73□□□□□ -0.21
ABCB1-202ENST00000416177 U2SURPO15042 1029 aaKnown RBP13.72□□□□□ -0.21
ABCB1-202ENST00000416177 RFC4P35249 363 aa13.72□□□□□ -0.21
ABCB1-202ENST00000416177 MTHFSDQ2M296 383 aaKnown RBP13.72□□□□□ -0.21
ABCB1-202ENST00000416177 NLGN2Q8NFZ4 835 aa13.72□□□□□ -0.21
ABCB1-202ENST00000416177 MYH14Q7Z406 1995 aaKnown RBP13.72□□□□□ -0.21
ABCB1-202ENST00000416177 TJP1Q07157 1748 aa13.72□□□□□ -0.21
ABCB1-202ENST00000416177 GNAT3A8MTJ3 354 aa13.71□□□□□ -0.21
ABCB1-202ENST00000416177 PTCD1O75127 700 aaKnown RBP13.71□□□□□ -0.21
ABCB1-202ENST00000416177 AMIGO3Q86WK7 504 aa13.71□□□□□ -0.21
ABCB1-202ENST00000416177 KIF13BQ9NQT8 1826 aa13.71□□□□□ -0.22
ABCB1-202ENST00000416177 C4AP0C0L4 1744 aa13.7□□□□□ -0.22
ABCB1-202ENST00000416177 CRKLP46109 303 aaKnown RBP13.7□□□□□ -0.22
ABCB1-202ENST00000416177 MKRN4PQ13434 485 aaPredicted RBP13.7□□□□□ -0.22
ABCB1-202ENST00000416177 ARHGEF1Q92888 912 aaKnown RBP13.7□□□□□ -0.22
ABCB1-202ENST00000416177 LGR6Q9HBX8 967 aa13.7□□□□□ -0.22
ABCB1-202ENST00000416177 UBR2Q8IWV8 1755 aa13.7□□□□□ -0.22
ABCB1-202ENST00000416177 MMP10P09238 476 aa13.69□□□□□ -0.22
ABCB1-202ENST00000416177 TGFB2P61812 414 aa13.69□□□□□ -0.22
ABCB1-202ENST00000416177 TEFQ10587 303 aa13.69□□□□□ -0.22
ABCB1-202ENST00000416177 PELP1Q8IZL8 1130 aaKnown RBP13.69□□□□□ -0.22
ABCB1-202ENST00000416177 TTC5Q8N0Z6 440 aa13.69□□□□□ -0.22
ABCB1-202ENST00000416177 TEX13AQ9BXU3 409 aaPredicted RBP13.69□□□□□ -0.22
ABCB1-202ENST00000416177 FCHSD2O94868 740 aa13.68□□□□□ -0.22
ABCB1-202ENST00000416177 GYS1P13807 737 aa13.68□□□□□ -0.22
ABCB1-202ENST00000416177 PPP2R1AP30153 589 aa13.68□□□□□ -0.22
ABCB1-202ENST00000416177 ZNF784Q8NCA9 323 aaPredicted RBP13.68□□□□□ -0.22
ABCB1-202ENST00000416177 CCDC87Q9NVE4 849 aa13.68□□□□□ -0.22
ABCB1-202ENST00000416177 KCPQ6ZWJ8 1503 aa13.68□□□□□ -0.22
ABCB1-202ENST00000416177 NEFMP07197 916 aa13.67□□□□□ -0.22
ABCB1-202ENST00000416177 RSPH6AQ9H0K4 717 aa13.67□□□□□ -0.22
ABCB1-202ENST00000416177 PARP3Q9Y6F1 533 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms