RNA–Protein interactions for RNA: ENST00000415356.1

AC007349.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC007349.3, Length 872 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007349.3-201ENST00000415356 RAPGEF4Q8WZA2 1011 aa10.26□□□□□ -0.77
AC007349.3-201ENST00000415356 WDR90Q96KV7 1748 aa10.26□□□□□ -0.77
AC007349.3-201ENST00000415356 RTL1A6NKG5 1358 aa10.26□□□□□ -0.77
AC007349.3-201ENST00000415356 ASAP1Q9ULH1 1129 aa10.25□□□□□ -0.77
AC007349.3-201ENST00000415356 EMILIN1Q9Y6C2 1016 aa10.25□□□□□ -0.77
AC007349.3-201ENST00000415356 PCDH11XQ9BZA7 1347 aa10.25□□□□□ -0.77
AC007349.3-201ENST00000415356 PCDH11YQ9BZA8 1340 aa10.25□□□□□ -0.77
AC007349.3-201ENST00000415356 LOC102724428A0A0B4J2F2 783 aa10.24□□□□□ -0.77
AC007349.3-201ENST00000415356 A0A0G2JLW4 131 aa10.24□□□□□ -0.77
AC007349.3-201ENST00000415356 MMP10P09238 476 aa10.24□□□□□ -0.77
AC007349.3-201ENST00000415356 SIK1P57059 783 aa10.24□□□□□ -0.77
AC007349.3-201ENST00000415356 FLAD1Q8NFF5 587 aa10.24□□□□□ -0.77
AC007349.3-201ENST00000415356 SLC4A9Q96Q91 983 aa10.24□□□□□ -0.77
AC007349.3-201ENST00000415356 GNPATO15228 680 aa10.23□□□□□ -0.77
AC007349.3-201ENST00000415356 COL13A1Q5TAT6 717 aaPredicted RBP10.23□□□□□ -0.77
AC007349.3-201ENST00000415356 PUS7Q96PZ0 661 aaKnown RBP10.23□□□□□ -0.77
AC007349.3-201ENST00000415356 INSRP06213 1382 aa10.23□□□□□ -0.77
AC007349.3-201ENST00000415356 SBF1O95248 1867 aa10.23□□□□□ -0.77
AC007349.3-201ENST00000415356 C4AP0C0L4 1744 aa10.22□□□□□ -0.77
AC007349.3-201ENST00000415356 DPEP1P16444 411 aa10.22□□□□□ -0.77
AC007349.3-201ENST00000415356 BCS1LQ9Y276 419 aa10.22□□□□□ -0.77
AC007349.3-201ENST00000415356 CGNL1Q0VF96 1302 aa10.22□□□□□ -0.77
AC007349.3-201ENST00000415356 NCAPD2Q15021 1401 aa10.22□□□□□ -0.77
AC007349.3-201ENST00000415356 COL5A3P25940 1745 aaPredicted RBP10.21□□□□□ -0.77
AC007349.3-201ENST00000415356 ARFGEF1Q9Y6D6 1849 aa10.21□□□□□ -0.77
AC007349.3-201ENST00000415356 SSFA2P28290 1259 aa10.21□□□□□ -0.77
AC007349.3-201ENST00000415356 APLP1P51693 650 aa10.21□□□□□ -0.77
AC007349.3-201ENST00000415356 NKX1-1Q15270 411 aaPredicted RBP10.21□□□□□ -0.77
AC007349.3-201ENST00000415356 CARD14Q9BXL6 1004 aa10.21□□□□□ -0.77
AC007349.3-201ENST00000415356 ATG3Q9NT62 314 aa10.21□□□□□ -0.77
AC007349.3-201ENST00000415356 FLT4P35916 1363 aa10.21□□□□□ -0.78
AC007349.3-201ENST00000415356 C10orf71Q711Q0 1435 aa10.21□□□□□ -0.78
AC007349.3-201ENST00000415356 SMG6Q86US8 1419 aaKnown RBP10.21□□□□□ -0.78
AC007349.3-201ENST00000415356 TOMM70O94826 608 aa10.2□□□□□ -0.78
AC007349.3-201ENST00000415356 KCNA3P22001 575 aa10.2□□□□□ -0.78
AC007349.3-201ENST00000415356 ATP6V1AP38606 617 aa10.2□□□□□ -0.78
AC007349.3-201ENST00000415356 ARHGAP27Q6ZUM4 889 aa10.2□□□□□ -0.78
AC007349.3-201ENST00000415356 KCPQ6ZWJ8 1503 aa10.2□□□□□ -0.78
AC007349.3-201ENST00000415356 SMARCC1Q92922 1105 aaPredicted RBP10.2□□□□□ -0.78
AC007349.3-201ENST00000415356 EYA1Q99502 592 aa10.2□□□□□ -0.78
AC007349.3-201ENST00000415356 NSD3Q9BZ95 1437 aa10.2□□□□□ -0.78
AC007349.3-201ENST00000415356 ANKRD26Q9UPS8 1709 aa10.2□□□□□ -0.78
AC007349.3-201ENST00000415356 CCDC88AQ3V6T2 1871 aa10.19□□□□□ -0.78
AC007349.3-201ENST00000415356 KDRP35968 1356 aa10.19□□□□□ -0.78
AC007349.3-201ENST00000415356 NCBP3Q53F19 620 aaKnown RBP10.19□□□□□ -0.78
AC007349.3-201ENST00000415356 PPM1GO15355 546 aaPredicted RBP10.18□□□□□ -0.78
AC007349.3-201ENST00000415356 FCHSD2O94868 740 aa10.18□□□□□ -0.78
AC007349.3-201ENST00000415356 PHKG2P15735 406 aa10.18□□□□□ -0.78
AC007349.3-201ENST00000415356 C9orf131Q5VYM1 1079 aa10.18□□□□□ -0.78
AC007349.3-201ENST00000415356 ARHGEF1Q92888 912 aaKnown RBP10.18□□□□□ -0.78
AC007349.3-201ENST00000415356 TMOD3Q9NYL9 352 aa10.18□□□□□ -0.78
AC007349.3-201ENST00000415356 GYS1P13807 737 aa10.17□□□□□ -0.78
AC007349.3-201ENST00000415356 SRP68Q9UHB9 627 aaKnown RBP10.17□□□□□ -0.78
AC007349.3-201ENST00000415356 TONSLQ96HA7 1378 aa10.16□□□□□ -0.78
AC007349.3-201ENST00000415356 CHRNA5P30532 468 aa10.16□□□□□ -0.78
AC007349.3-201ENST00000415356 PRELPP51888 382 aa10.16□□□□□ -0.78
AC007349.3-201ENST00000415356 DDR1Q08345 913 aa10.16□□□□□ -0.78
AC007349.3-201ENST00000415356 KLRG1Q96E93 195 aa10.16□□□□□ -0.78
AC007349.3-201ENST00000415356 ZNF219Q9P2Y4 722 aaPredicted RBP10.16□□□□□ -0.78
AC007349.3-201ENST00000415356 AFDNP55196 1824 aaKnown RBP10.16□□□□□ -0.78
AC007349.3-201ENST00000415356 ADAMTS7Q9UKP4 1686 aa10.15□□□□□ -0.78
AC007349.3-201ENST00000415356 TGFB2P61812 414 aa10.15□□□□□ -0.78
AC007349.3-201ENST00000415356 TMF1P82094 1093 aa10.15□□□□□ -0.78
AC007349.3-201ENST00000415356 TRAPPC3LQ5T215 181 aa10.15□□□□□ -0.78
AC007349.3-201ENST00000415356 JMYQ8N9B5 988 aa10.15□□□□□ -0.78
AC007349.3-201ENST00000415356 RBM46Q8TBY0 533 aaKnown RBP10.15□□□□□ -0.78
AC007349.3-201ENST00000415356 RRAGCQ9HB90 399 aa10.15□□□□□ -0.78
AC007349.3-201ENST00000415356 SPG7Q9UQ90 795 aa10.15□□□□□ -0.78
AC007349.3-201ENST00000415356 TJP1Q07157 1748 aa10.15□□□□□ -0.78
AC007349.3-201ENST00000415356 KDM6AO15550 1401 aaPredicted RBP10.15□□□□□ -0.79
AC007349.3-201ENST00000415356 NPM3O75607 178 aaKnown RBP10.14□□□□□ -0.79
AC007349.3-201ENST00000415356 RASSF7Q02833 373 aa10.14□□□□□ -0.79
AC007349.3-201ENST00000415356 FKBP8Q14318 412 aa10.14□□□□□ -0.79
AC007349.3-201ENST00000415356 IFNL2Q8IZJ0 200 aa10.14□□□□□ -0.79
AC007349.3-201ENST00000415356 POLKQ9UBT6 870 aa10.14□□□□□ -0.79
AC007349.3-201ENST00000415356 RTCBQ9Y3I0 505 aaKnown RBP10.14□□□□□ -0.79
AC007349.3-201ENST00000415356 ZNF831Q5JPB2 1677 aa10.14□□□□□ -0.79
AC007349.3-201ENST00000415356 KIF24Q5T7B8 1368 aa10.14□□□□□ -0.79
AC007349.3-201ENST00000415356 WASHC2AQ641Q2 1341 aa10.13□□□□□ -0.79
AC007349.3-201ENST00000415356 EIF4A2Q14240 407 aaKnown RBP10.13□□□□□ -0.79
AC007349.3-201ENST00000415356 DCAF5Q96JK2 942 aa10.13□□□□□ -0.79
AC007349.3-201ENST00000415356 RNF181Q9P0P0 153 aa10.13□□□□□ -0.79
AC007349.3-201ENST00000415356 TNRC6CQ9HCJ0 1690 aaKnown RBP10.12□□□□□ -0.79
AC007349.3-201ENST00000415356 VIRMAQ69YN4 1812 aaKnown RBP10.12□□□□□ -0.79
AC007349.3-201ENST00000415356 RPS6KA4O75676 772 aa10.12□□□□□ -0.79
AC007349.3-201ENST00000415356 TNNT2P45379 298 aaPredicted RBP10.12□□□□□ -0.79
AC007349.3-201ENST00000415356 NLGN1Q8N2Q7 840 aa10.12□□□□□ -0.79
AC007349.3-201ENST00000415356 CCDC87Q9NVE4 849 aa10.12□□□□□ -0.79
AC007349.3-201ENST00000415356 CNTNAP4Q9C0A0 1308 aa10.11□□□□□ -0.79
AC007349.3-201ENST00000415356 PTCD1O75127 700 aaKnown RBP10.11□□□□□ -0.79
AC007349.3-201ENST00000415356 RFC4P35249 363 aa10.11□□□□□ -0.79
AC007349.3-201ENST00000415356 AEBP1Q8IUX7 1158 aa10.11□□□□□ -0.79
AC007349.3-201ENST00000415356 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.11□□□□□ -0.79
AC007349.3-201ENST00000415356 PARP3Q9Y6F1 533 aa10.11□□□□□ -0.79
AC007349.3-201ENST00000415356 CRKLP46109 303 aaKnown RBP10.1□□□□□ -0.79
AC007349.3-201ENST00000415356 RC3H1Q5TC82 1133 aaKnown RBP10.1□□□□□ -0.79
AC007349.3-201ENST00000415356 C16orf71Q8IYS4 520 aaPredicted RBP10.1□□□□□ -0.79
AC007349.3-201ENST00000415356 TNS4Q8IZW8 715 aa10.1□□□□□ -0.79
AC007349.3-201ENST00000415356 PIM2Q9P1W9 311 aa10.1□□□□□ -0.79
AC007349.3-201ENST00000415356 TIAM2Q8IVF5 1701 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms